RNA–Protein interactions for RNA: ENST00000394331.3

HOXC6-202, Transcript of homeobox C6, humanhuman

TSL 1 (best) BASIC

Gene HOXC6, Length 2,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-202ENST00000394331 MAP4P27816 1152 aaKnown RBP19.12■□□□□ 0.65
HOXC6-202ENST00000394331 SELENBP1Q13228 472 aa19.12■□□□□ 0.65
HOXC6-202ENST00000394331 KCNT1Q5JUK3 1230 aa19.12■□□□□ 0.65
HOXC6-202ENST00000394331 ZNF618Q5T7W0 954 aa19.12■□□□□ 0.65
HOXC6-202ENST00000394331 EEF1DP3Q658K8 133 aa19.12■□□□□ 0.65
HOXC6-202ENST00000394331 ZBTB49Q6ZSB9 765 aa19.12■□□□□ 0.65
HOXC6-202ENST00000394331 XYLT1Q86Y38 959 aa19.12■□□□□ 0.65
HOXC6-202ENST00000394331 MCUQ8NE86 351 aa19.12■□□□□ 0.65
HOXC6-202ENST00000394331 TRAF3IP1Q8TDR0 691 aaPredicted RBP19.12■□□□□ 0.65
HOXC6-202ENST00000394331 RAB2BQ8WUD1 216 aa19.12■□□□□ 0.65
HOXC6-202ENST00000394331 CDT1Q9H211 546 aa19.12■□□□□ 0.65
HOXC6-202ENST00000394331 SEMA6AQ9H2E6 1030 aa19.12■□□□□ 0.65
HOXC6-202ENST00000394331 POLR1BQ9H9Y6 1135 aa19.12■□□□□ 0.65
HOXC6-202ENST00000394331 SIAEQ9HAT2 523 aa19.12■□□□□ 0.65
HOXC6-202ENST00000394331 VAPBO95292 243 aa19.11■□□□□ 0.65
HOXC6-202ENST00000394331 SLC25A27O95847 323 aa19.11■□□□□ 0.65
HOXC6-202ENST00000394331 MAGEA3P43357 314 aa19.11■□□□□ 0.65
HOXC6-202ENST00000394331 ROR1Q01973 937 aa19.11■□□□□ 0.65
HOXC6-202ENST00000394331 TIGD2Q4W5G0 525 aa19.11■□□□□ 0.65
HOXC6-202ENST00000394331 AGMOQ6ZNB7 445 aa19.11■□□□□ 0.65
HOXC6-202ENST00000394331 ZC3H7AQ8IWR0 971 aaKnown RBP19.11■□□□□ 0.65
HOXC6-202ENST00000394331 TAB3Q8N5C8 712 aaPredicted RBP19.11■□□□□ 0.65
HOXC6-202ENST00000394331 KCTD6Q8NC69 237 aa19.11■□□□□ 0.65
HOXC6-202ENST00000394331 ANKK1Q8NFD2 765 aa19.11■□□□□ 0.65
HOXC6-202ENST00000394331 CMASQ8NFW8 434 aaPredicted RBP19.11■□□□□ 0.65
HOXC6-202ENST00000394331 TRIB2Q92519 343 aa19.11■□□□□ 0.65
HOXC6-202ENST00000394331 RTP4Q96DX8 246 aa19.11■□□□□ 0.65
HOXC6-202ENST00000394331 CPXM1Q96SM3 734 aa19.11■□□□□ 0.65
HOXC6-202ENST00000394331 TRAF6Q9Y4K3 522 aa19.11■□□□□ 0.65
HOXC6-202ENST00000394331 KMOO15229 486 aa19.11■□□□□ 0.65
HOXC6-202ENST00000394331 PAPSS1O43252 624 aaPredicted RBP19.11■□□□□ 0.65
HOXC6-202ENST00000394331 B4GALT5O43286 388 aa19.11■□□□□ 0.65
HOXC6-202ENST00000394331 HBP1O60381 514 aa19.11■□□□□ 0.65
HOXC6-202ENST00000394331 H2AFYO75367 372 aaKnown RBP19.11■□□□□ 0.65
HOXC6-202ENST00000394331 TOP3BO95985 862 aaKnown RBP19.11■□□□□ 0.65
HOXC6-202ENST00000394331 CXCL8P10145 99 aa19.11■□□□□ 0.65
HOXC6-202ENST00000394331 TGM1P22735 817 aa19.11■□□□□ 0.65
HOXC6-202ENST00000394331 RCVRNP35243 200 aa19.11■□□□□ 0.65
HOXC6-202ENST00000394331 RAP1GAPP47736 663 aa19.11■□□□□ 0.65
HOXC6-202ENST00000394331 PTPN11Q06124 597 aaPredicted RBP19.11■□□□□ 0.65
HOXC6-202ENST00000394331 ART3Q13508 389 aa19.11■□□□□ 0.65
HOXC6-202ENST00000394331 TTC23LQ6PF05 361 aa19.11■□□□□ 0.65
HOXC6-202ENST00000394331 CAND1Q86VP6 1230 aaKnown RBP19.11■□□□□ 0.65
HOXC6-202ENST00000394331 KIAA0319LQ8IZA0 1049 aa19.11■□□□□ 0.65
HOXC6-202ENST00000394331 CLIP3Q96DZ5 547 aa19.11■□□□□ 0.65
HOXC6-202ENST00000394331 SPATA33Q96N06 139 aa19.11■□□□□ 0.65
HOXC6-202ENST00000394331 HMG20AQ9NP66 347 aa19.11■□□□□ 0.65
HOXC6-202ENST00000394331 RGS17Q9UGC6 210 aaPredicted RBP19.11■□□□□ 0.65
HOXC6-202ENST00000394331 SIX4Q9UIU6 781 aa19.11■□□□□ 0.65
HOXC6-202ENST00000394331 PSME2Q9UL46 239 aa19.11■□□□□ 0.65
HOXC6-202ENST00000394331 C1orf232A0A0U1RR37 186 aa19.11■□□□□ 0.65
HOXC6-202ENST00000394331 MX2P20592 715 aa19.11■□□□□ 0.65
HOXC6-202ENST00000394331 PPM1LQ5SGD2 360 aa19.11■□□□□ 0.65
HOXC6-202ENST00000394331 CALML6Q8TD86 181 aa19.11■□□□□ 0.65
HOXC6-202ENST00000394331 USP13Q92995 863 aaPredicted RBP19.11■□□□□ 0.65
HOXC6-202ENST00000394331 SLCO4A1Q96BD0 722 aa19.11■□□□□ 0.65
HOXC6-202ENST00000394331 SH3GL1Q99961 368 aa19.11■□□□□ 0.65
HOXC6-202ENST00000394331 CYP3A43Q9HB55 503 aa19.11■□□□□ 0.65
HOXC6-202ENST00000394331 SACM1LQ9NTJ5 587 aa19.11■□□□□ 0.65
HOXC6-202ENST00000394331 THG1LQ9NWX6 298 aaKnown RBP19.11■□□□□ 0.65
HOXC6-202ENST00000394331 TJP2Q9UDY2 1190 aa19.11■□□□□ 0.65
HOXC6-202ENST00000394331 RBMX2Q9Y388 322 aaKnown RBP19.11■□□□□ 0.65
HOXC6-202ENST00000394331 TCAF1Q9Y4C2 921 aa19.11■□□□□ 0.65
HOXC6-202ENST00000394331 CROCCQ5TZA2 2017 aa19.1■□□□□ 0.65
HOXC6-202ENST00000394331 MSI1O43347 362 aaKnown RBP19.1■□□□□ 0.65
HOXC6-202ENST00000394331 ENO3P13929 434 aaPredicted RBP19.1■□□□□ 0.65
HOXC6-202ENST00000394331 ATICP31939 592 aa19.1■□□□□ 0.65
HOXC6-202ENST00000394331 CDH8P55286 799 aa19.1■□□□□ 0.65
HOXC6-202ENST00000394331 MBTD1Q05BQ5 628 aa19.1■□□□□ 0.65
HOXC6-202ENST00000394331 SLC36A3Q495N2 470 aa19.1■□□□□ 0.65
HOXC6-202ENST00000394331 HMBOX1Q6NT76 420 aa19.1■□□□□ 0.65
HOXC6-202ENST00000394331 EFCAB12Q6NXP0 572 aa19.1■□□□□ 0.65
HOXC6-202ENST00000394331 ANKRD13BQ86YJ7 626 aa19.1■□□□□ 0.65
HOXC6-202ENST00000394331 RFX6Q8HWS3 928 aa19.1■□□□□ 0.65
HOXC6-202ENST00000394331 HERC6Q8IVU3 1022 aa19.1■□□□□ 0.65
HOXC6-202ENST00000394331 EMC1Q8N766 993 aa19.1■□□□□ 0.65
HOXC6-202ENST00000394331 C1orf127Q8N9H9 656 aa19.1■□□□□ 0.65
HOXC6-202ENST00000394331 OR7G1Q8NGA0 311 aa19.1■□□□□ 0.65
HOXC6-202ENST00000394331 CIB1Q99828 191 aa19.1■□□□□ 0.65
HOXC6-202ENST00000394331 PRMT7Q9NVM4 692 aaPredicted RBP19.1■□□□□ 0.65
HOXC6-202ENST00000394331 SOCS7O14512 581 aa19.1■□□□□ 0.65
HOXC6-202ENST00000394331 MSX2P35548 267 aaPredicted RBP19.1■□□□□ 0.65
HOXC6-202ENST00000394331 HPCAL1P37235 193 aa19.1■□□□□ 0.65
HOXC6-202ENST00000394331 DMPKQ09013 629 aa19.1■□□□□ 0.65
HOXC6-202ENST00000394331 CHSY3Q70JA7 882 aa19.1■□□□□ 0.65
HOXC6-202ENST00000394331 TMCO5AQ8N6Q1 288 aa19.1■□□□□ 0.65
HOXC6-202ENST00000394331 SLC4A11Q8NBS3 891 aa19.1■□□□□ 0.65
HOXC6-202ENST00000394331 TMEM176AQ96HP8 235 aa19.1■□□□□ 0.65
HOXC6-202ENST00000394331 OR52B2Q96RD2 323 aa19.1■□□□□ 0.65
HOXC6-202ENST00000394331 TCF12Q99081 682 aa19.1■□□□□ 0.65
HOXC6-202ENST00000394331 NFKBIZQ9BYH8 718 aa19.1■□□□□ 0.65
HOXC6-202ENST00000394331 NAA50Q9GZZ1 169 aaKnown RBP19.1■□□□□ 0.65
HOXC6-202ENST00000394331 ASNSD1Q9NWL6 643 aa19.1■□□□□ 0.65
HOXC6-202ENST00000394331 SMOXQ9NWM0 555 aa19.1■□□□□ 0.65
HOXC6-202ENST00000394331 BRCA1P38398 1863 aaKnown RBP19.09■□□□□ 0.65
HOXC6-202ENST00000394331 IQCJ-SCHIP1C9J366 451 aaPredicted RBP19.09■□□□□ 0.65
HOXC6-202ENST00000394331 CFLARO15519 480 aa19.09■□□□□ 0.65
HOXC6-202ENST00000394331 MYO1DO94832 1006 aa19.09■□□□□ 0.65
HOXC6-202ENST00000394331 ALDOAP04075 364 aaKnown RBP19.09■□□□□ 0.65
HOXC6-202ENST00000394331 TNFAIP2Q03169 654 aa19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms