RNA–Protein interactions for RNA: ENST00000394106.6

CMTM4-202, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM4, Length 1,187 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-202ENST00000394106 ANAPC7Q9UJX3 599 aa31.31■■■□□ 2.6
CMTM4-202ENST00000394106 SPTBN2O15020 2390 aa31.31■■■□□ 2.6
CMTM4-202ENST00000394106 ZSCAN5CA6NGD5 496 aaPredicted RBP31.3■■■□□ 2.6
CMTM4-202ENST00000394106 CYP1A2P05177 515 aa31.3■■■□□ 2.6
CMTM4-202ENST00000394106 CSRP1P21291 193 aaKnown RBP31.3■■■□□ 2.6
CMTM4-202ENST00000394106 MAT2AP31153 395 aaKnown RBP31.3■■■□□ 2.6
CMTM4-202ENST00000394106 RACK1P63244 317 aaKnown RBP31.3■■■□□ 2.6
CMTM4-202ENST00000394106 KIF19Q2TAC6 998 aa31.3■■■□□ 2.6
CMTM4-202ENST00000394106 HLA-BQ31612 363 aa31.3■■■□□ 2.6
CMTM4-202ENST00000394106 PARP15Q460N3 678 aa31.3■■■□□ 2.6
CMTM4-202ENST00000394106 PIP5KL1Q5T9C9 394 aa31.3■■■□□ 2.6
CMTM4-202ENST00000394106 IL27RAQ6UWB1 636 aa31.3■■■□□ 2.6
CMTM4-202ENST00000394106 OR6K2Q8NGY2 324 aa31.3■■■□□ 2.6
CMTM4-202ENST00000394106 ARHGEF26Q96DR7 871 aa31.3■■■□□ 2.6
CMTM4-202ENST00000394106 PPP1R16AQ96I34 528 aa31.3■■■□□ 2.6
CMTM4-202ENST00000394106 DNAJC7Q99615 494 aa31.3■■■□□ 2.6
CMTM4-202ENST00000394106 AASDHPPTQ9NRN7 309 aa31.3■■■□□ 2.6
CMTM4-202ENST00000394106 ZNHIT6Q9NWK9 470 aaKnown RBP31.3■■■□□ 2.6
CMTM4-202ENST00000394106 ANKRD6Q9Y2G4 727 aa31.3■■■□□ 2.6
CMTM4-202ENST00000394106 SNX11Q9Y5W9 270 aa31.3■■■□□ 2.6
CMTM4-202ENST00000394106 C10orf142B7Z368 130 aa31.29■■■□□ 2.6
CMTM4-202ENST00000394106 GJB3O75712 270 aa31.29■■■□□ 2.6
CMTM4-202ENST00000394106 CER1O95813 267 aa31.29■■■□□ 2.6
CMTM4-202ENST00000394106 ADRB1P08588 477 aa31.29■■■□□ 2.6
CMTM4-202ENST00000394106 PCK1P35558 622 aa31.29■■■□□ 2.6
CMTM4-202ENST00000394106 CCDC15Q0P6D6 951 aa31.29■■■□□ 2.6
CMTM4-202ENST00000394106 SERINC3Q13530 473 aa31.29■■■□□ 2.6
CMTM4-202ENST00000394106 ACAP1Q15027 740 aa31.29■■■□□ 2.6
CMTM4-202ENST00000394106 N4BP2L1Q5TBK1 243 aaPredicted RBP31.29■■■□□ 2.6
CMTM4-202ENST00000394106 RFX8Q6ZV50 586 aa31.29■■■□□ 2.6
CMTM4-202ENST00000394106 PSTKQ8IV42 348 aaKnown RBP31.29■■■□□ 2.6
CMTM4-202ENST00000394106 CELF6Q96J87 481 aaKnown RBP31.29■■■□□ 2.6
CMTM4-202ENST00000394106 SLC32A1Q9H598 525 aa31.29■■■□□ 2.6
CMTM4-202ENST00000394106 ZWILCHQ9H900 591 aa31.29■■■□□ 2.6
CMTM4-202ENST00000394106 DONSONQ9NYP3 566 aa31.29■■■□□ 2.6
CMTM4-202ENST00000394106 CNOT1A5YKK6 2376 aaKnown RBP31.29■■■□□ 2.6
CMTM4-202ENST00000394106 TMCC1O94876 653 aa31.28■■■□□ 2.6
CMTM4-202ENST00000394106 TCF4P15884 667 aa31.28■■■□□ 2.6
CMTM4-202ENST00000394106 TAS2R38P59533 333 aa31.28■■■□□ 2.6
CMTM4-202ENST00000394106 PIGHQ14442 188 aaPredicted RBP31.28■■■□□ 2.6
CMTM4-202ENST00000394106 TSR1Q2NL82 804 aaKnown RBP31.28■■■□□ 2.6
CMTM4-202ENST00000394106 SMTNL2Q2TAL5 461 aa31.28■■■□□ 2.6
CMTM4-202ENST00000394106 KCNT1Q5JUK3 1230 aa31.28■■■□□ 2.6
CMTM4-202ENST00000394106 ERN2Q76MJ5 926 aaKnown RBP31.28■■■□□ 2.6
CMTM4-202ENST00000394106 PRPF39Q86UA1 669 aaKnown RBP31.28■■■□□ 2.6
CMTM4-202ENST00000394106 NETO2Q8NC67 525 aa31.28■■■□□ 2.6
CMTM4-202ENST00000394106 SERAC1Q96JX3 654 aa31.28■■■□□ 2.6
CMTM4-202ENST00000394106 DEF6Q9H4E7 631 aa31.28■■■□□ 2.6
CMTM4-202ENST00000394106 IP6K2Q9UHH9 426 aa31.28■■■□□ 2.6
CMTM4-202ENST00000394106 TPX2Q9ULW0 747 aaKnown RBP31.28■■■□□ 2.6
CMTM4-202ENST00000394106 GSRP00390 522 aa31.27■■■□□ 2.6
CMTM4-202ENST00000394106 CEACAM1P13688 526 aa31.27■■■□□ 2.6
CMTM4-202ENST00000394106 CD59P13987 128 aa31.27■■■□□ 2.6
CMTM4-202ENST00000394106 IL1R2P27930 398 aa31.27■■■□□ 2.6
CMTM4-202ENST00000394106 GKP32189 559 aa31.27■■■□□ 2.6
CMTM4-202ENST00000394106 C21orf59P57076 290 aa31.27■■■□□ 2.6
CMTM4-202ENST00000394106 SNRPD1P62314 119 aaKnown RBP31.27■■■□□ 2.6
CMTM4-202ENST00000394106 ATXN7L2Q5T6C5 722 aaPredicted RBP31.27■■■□□ 2.6
CMTM4-202ENST00000394106 OR2AP1Q8NGE2 309 aa31.27■■■□□ 2.6
CMTM4-202ENST00000394106 HSPH1Q92598 858 aa31.27■■■□□ 2.6
CMTM4-202ENST00000394106 PREBQ9HCU5 417 aa31.27■■■□□ 2.6
CMTM4-202ENST00000394106 NENFQ9UMX5 172 aa31.27■■■□□ 2.6
CMTM4-202ENST00000394106 FNDC3AQ9Y2H6 1198 aaKnown RBP31.27■■■□□ 2.6
CMTM4-202ENST00000394106 UPK3BL1B0FP48 263 aa31.26■■■□□ 2.59
CMTM4-202ENST00000394106 UPK3BL2E5RIL1 263 aa31.26■■■□□ 2.59
CMTM4-202ENST00000394106 KRIT1O00522 736 aa31.26■■■□□ 2.59
CMTM4-202ENST00000394106 WNT9AO14904 365 aa31.26■■■□□ 2.59
CMTM4-202ENST00000394106 LATO43561 262 aa31.26■■■□□ 2.59
CMTM4-202ENST00000394106 RNGTTO60942 597 aaKnown RBP31.26■■■□□ 2.59
CMTM4-202ENST00000394106 ERCC2P18074 760 aa31.26■■■□□ 2.59
CMTM4-202ENST00000394106 NDST2P52849 883 aa31.26■■■□□ 2.59
CMTM4-202ENST00000394106 ADKP55263 362 aaKnown RBP31.26■■■□□ 2.59
CMTM4-202ENST00000394106 SLC14A1Q13336 389 aa31.26■■■□□ 2.59
CMTM4-202ENST00000394106 PIP4P1Q86T03 277 aa31.26■■■□□ 2.59
CMTM4-202ENST00000394106 TRIM69Q86WT6 500 aa31.26■■■□□ 2.59
CMTM4-202ENST00000394106 PLPP6Q8IY26 295 aa31.26■■■□□ 2.59
CMTM4-202ENST00000394106 HDAC8Q9BY41 377 aa31.26■■■□□ 2.59
CMTM4-202ENST00000394106 LRRC19Q9H756 370 aa31.26■■■□□ 2.59
CMTM4-202ENST00000394106 ABHD10Q9NUJ1 306 aa31.26■■■□□ 2.59
CMTM4-202ENST00000394106 CWC15Q9P013 229 aaKnown RBP31.26■■■□□ 2.59
CMTM4-202ENST00000394106 TMEM131Q92545 1883 aa31.26■■■□□ 2.59
CMTM4-202ENST00000394106 ITGB7P26010 798 aa31.25■■■□□ 2.59
CMTM4-202ENST00000394106 RHOAP61586 193 aa31.25■■■□□ 2.59
CMTM4-202ENST00000394106 SLC18A3Q16572 532 aa31.25■■■□□ 2.59
CMTM4-202ENST00000394106 CASKIN2Q8WXE0 1202 aa31.25■■■□□ 2.59
CMTM4-202ENST00000394106 SLC39A8Q9C0K1 460 aa31.25■■■□□ 2.59
CMTM4-202ENST00000394106 STAU2Q9NUL3 570 aaKnown RBP eCLIP31.25■■■□□ 2.59
CMTM4-202ENST00000394106 MYO1FO00160 1098 aa31.24■■■□□ 2.59
CMTM4-202ENST00000394106 KCNK3O14649 394 aa31.24■■■□□ 2.59
CMTM4-202ENST00000394106 VILLO15195 856 aa31.24■■■□□ 2.59
CMTM4-202ENST00000394106 MFAP3LO75121 409 aa31.24■■■□□ 2.59
CMTM4-202ENST00000394106 WNT1P04628 370 aa31.24■■■□□ 2.59
CMTM4-202ENST00000394106 CD38P28907 300 aa31.24■■■□□ 2.59
CMTM4-202ENST00000394106 SSR1P43307 286 aaKnown RBP31.24■■■□□ 2.59
CMTM4-202ENST00000394106 NEK3P51956 506 aa31.24■■■□□ 2.59
CMTM4-202ENST00000394106 MYLK3Q32MK0 819 aa31.24■■■□□ 2.59
CMTM4-202ENST00000394106 BOLA3Q53S33 107 aa31.24■■■□□ 2.59
CMTM4-202ENST00000394106 FBXL19Q6PCT2 694 aa31.24■■■□□ 2.59
CMTM4-202ENST00000394106 NIPA2Q8N8Q9 360 aa31.24■■■□□ 2.59
CMTM4-202ENST00000394106 ZNF564Q8TBZ8 553 aaPredicted RBP31.24■■■□□ 2.59
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms