RNA–Protein interactions for RNA: ENST00000392481.6

RFC4-202, Transcript of replication factor C subunit 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RFC4, Length 1,448 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-202ENST00000392481 TEAD4Q15561 434 aa12.05□□□□□ -0.48
RFC4-202ENST00000392481 DPYSL2Q16555 572 aa12.05□□□□□ -0.48
RFC4-202ENST00000392481 POM121L1PQ3SYA9 428 aa12.05□□□□□ -0.48
RFC4-202ENST00000392481 INO80DQ53TQ3 878 aaPredicted RBP12.05□□□□□ -0.48
RFC4-202ENST00000392481 ARSIQ5FYB1 569 aa12.05□□□□□ -0.48
RFC4-202ENST00000392481 H2AFVQ71UI9 128 aa12.05□□□□□ -0.48
RFC4-202ENST00000392481 ZNF354CQ86Y25 554 aa12.05□□□□□ -0.48
RFC4-202ENST00000392481 MINDY1Q8N5J2 469 aa12.05□□□□□ -0.48
RFC4-202ENST00000392481 ZNF564Q8TBZ8 553 aaPredicted RBP12.05□□□□□ -0.48
RFC4-202ENST00000392481 GRIN3AQ8TCU5 1115 aa12.05□□□□□ -0.48
RFC4-202ENST00000392481 TEKT4Q8WW24 435 aa12.05□□□□□ -0.48
RFC4-202ENST00000392481 CTNNBL1Q8WYA6 563 aaPredicted RBP12.05□□□□□ -0.48
RFC4-202ENST00000392481 BTBD6Q96KE9 485 aa12.05□□□□□ -0.48
RFC4-202ENST00000392481 CCDC42Q96M95 316 aa12.05□□□□□ -0.48
RFC4-202ENST00000392481 CHP1Q99653 195 aa12.05□□□□□ -0.48
RFC4-202ENST00000392481 HEPHQ9BQS7 1158 aa12.05□□□□□ -0.48
RFC4-202ENST00000392481 ORAI3Q9BRQ5 295 aa12.05□□□□□ -0.48
RFC4-202ENST00000392481 HDAC8Q9BY41 377 aa12.05□□□□□ -0.48
RFC4-202ENST00000392481 KLC2Q9H0B6 622 aa12.05□□□□□ -0.48
RFC4-202ENST00000392481 TM9SF3Q9HD45 589 aa12.05□□□□□ -0.48
RFC4-202ENST00000392481 DYRK4Q9NR20 520 aa12.05□□□□□ -0.48
RFC4-202ENST00000392481 CWC15Q9P013 229 aaKnown RBP12.05□□□□□ -0.48
RFC4-202ENST00000392481 SLCO1B1Q9Y6L6 691 aa12.05□□□□□ -0.48
RFC4-202ENST00000392481 WASF2Q9Y6W5 498 aa12.05□□□□□ -0.48
RFC4-202ENST00000392481 TPRP12270 2363 aaKnown RBP12.05□□□□□ -0.48
RFC4-202ENST00000392481 TBC1D3DA0A087WVF3 549 aa12.04□□□□□ -0.48
RFC4-202ENST00000392481 TBC1D3IA0A087WXS9 549 aa12.04□□□□□ -0.48
RFC4-202ENST00000392481 TBC1D3EA0A087X179 549 aa12.04□□□□□ -0.48
RFC4-202ENST00000392481 TBC1D3KA0A087X1G2 549 aa12.04□□□□□ -0.48
RFC4-202ENST00000392481 TBC1D3FA6NER0 549 aaPredicted RBP12.04□□□□□ -0.48
RFC4-202ENST00000392481 TBC1D3LB9A6J9 549 aa12.04□□□□□ -0.48
RFC4-202ENST00000392481 H3BRJ5 948 aa12.04□□□□□ -0.48
RFC4-202ENST00000392481 LATO43561 262 aa12.04□□□□□ -0.48
RFC4-202ENST00000392481 LEFTY1O75610 366 aa12.04□□□□□ -0.48
RFC4-202ENST00000392481 TMCC1O94876 653 aa12.04□□□□□ -0.48
RFC4-202ENST00000392481 POP4O95707 220 aaKnown RBP12.04□□□□□ -0.48
RFC4-202ENST00000392481 TBC1D3HP0C7X1 549 aa12.04□□□□□ -0.48
RFC4-202ENST00000392481 TCF4P15884 667 aa12.04□□□□□ -0.48
RFC4-202ENST00000392481 ERCC2P18074 760 aa12.04□□□□□ -0.48
RFC4-202ENST00000392481 NUDT1P36639 197 aa12.04□□□□□ -0.48
RFC4-202ENST00000392481 GRIA4P48058 902 aa12.04□□□□□ -0.48
RFC4-202ENST00000392481 SNRPD1P62314 119 aaKnown RBP12.04□□□□□ -0.48
RFC4-202ENST00000392481 DPYSQ14117 519 aa12.04□□□□□ -0.48
RFC4-202ENST00000392481 SMTNL2Q2TAL5 461 aa12.04□□□□□ -0.48
RFC4-202ENST00000392481 UAP1L1Q3KQV9 507 aa12.04□□□□□ -0.48
RFC4-202ENST00000392481 KCNT1Q5JUK3 1230 aa12.04□□□□□ -0.48
RFC4-202ENST00000392481 PIP5KL1Q5T9C9 394 aa12.04□□□□□ -0.48
RFC4-202ENST00000392481 AFMIDQ63HM1 303 aa12.04□□□□□ -0.48
RFC4-202ENST00000392481 TBC1D3GQ6DHY5 549 aa12.04□□□□□ -0.48
RFC4-202ENST00000392481 TBC1D3CQ6IPX1 549 aa12.04□□□□□ -0.48
RFC4-202ENST00000392481 IL27RAQ6UWB1 636 aa12.04□□□□□ -0.48
RFC4-202ENST00000392481 LEKR1Q6ZMV7 388 aa12.04□□□□□ -0.48
RFC4-202ENST00000392481 ERN2Q76MJ5 926 aaKnown RBP12.04□□□□□ -0.48
RFC4-202ENST00000392481 TBC1D3Q8IZP1 549 aaPredicted RBP12.04□□□□□ -0.48
RFC4-202ENST00000392481 OR2AP1Q8NGE2 309 aa12.04□□□□□ -0.48
RFC4-202ENST00000392481 ARRDC3Q96B67 414 aa12.04□□□□□ -0.48
RFC4-202ENST00000392481 PPP1R16AQ96I34 528 aa12.04□□□□□ -0.48
RFC4-202ENST00000392481 LRIG1Q96JA1 1093 aa12.04□□□□□ -0.48
RFC4-202ENST00000392481 TM6SF2Q9BZW4 377 aa12.04□□□□□ -0.48
RFC4-202ENST00000392481 RBSNQ9H1K0 784 aa12.04□□□□□ -0.48
RFC4-202ENST00000392481 ZWILCHQ9H900 591 aa12.04□□□□□ -0.48
RFC4-202ENST00000392481 NHEJ1Q9H9Q4 299 aaPredicted RBP12.04□□□□□ -0.48
RFC4-202ENST00000392481 PREBQ9HCU5 417 aa12.04□□□□□ -0.48
RFC4-202ENST00000392481 DNAAF2Q9NVR5 837 aaKnown RBP12.04□□□□□ -0.48
RFC4-202ENST00000392481 CTTNBP2NLQ9P2B4 639 aa12.04□□□□□ -0.48
RFC4-202ENST00000392481 LCMT1Q9UIC8 334 aa12.04□□□□□ -0.48
RFC4-202ENST00000392481 CHD8Q9HCK8 2581 aa12.04□□□□□ -0.48
RFC4-202ENST00000392481 ARHGAP42A6NI28 874 aa12.03□□□□□ -0.48
RFC4-202ENST00000392481 UPK3BL1B0FP48 263 aa12.03□□□□□ -0.48
RFC4-202ENST00000392481 UPK3BL2E5RIL1 263 aa12.03□□□□□ -0.48
RFC4-202ENST00000392481 OPHN1O60890 802 aa12.03□□□□□ -0.48
RFC4-202ENST00000392481 TMEM253P0C7T8 217 aa12.03□□□□□ -0.48
RFC4-202ENST00000392481 RARAP10276 462 aa12.03□□□□□ -0.48
RFC4-202ENST00000392481 ITGB7P26010 798 aa12.03□□□□□ -0.48
RFC4-202ENST00000392481 ARL4AP40617 200 aa12.03□□□□□ -0.48
RFC4-202ENST00000392481 CSNK1EP49674 416 aaKnown RBP12.03□□□□□ -0.48
RFC4-202ENST00000392481 TAS2R38P59533 333 aa12.03□□□□□ -0.48
RFC4-202ENST00000392481 RACK1P63244 317 aaKnown RBP12.03□□□□□ -0.48
RFC4-202ENST00000392481 BNC1Q01954 994 aa12.03□□□□□ -0.48
RFC4-202ENST00000392481 SLC25A11Q02978 314 aaKnown RBP12.03□□□□□ -0.48
RFC4-202ENST00000392481 MYLK3Q32MK0 819 aa12.03□□□□□ -0.48
RFC4-202ENST00000392481 PPM1JQ5JR12 505 aa12.03□□□□□ -0.48
RFC4-202ENST00000392481 NEK5Q6P3R8 708 aa12.03□□□□□ -0.48
RFC4-202ENST00000392481 POLNQ7Z5Q5 900 aa12.03□□□□□ -0.48
RFC4-202ENST00000392481 TRIM69Q86WT6 500 aa12.03□□□□□ -0.48
RFC4-202ENST00000392481 RYBPQ8N488 228 aaPredicted RBP12.03□□□□□ -0.48
RFC4-202ENST00000392481 LZTR1Q8N653 840 aa12.03□□□□□ -0.48
RFC4-202ENST00000392481 HSPH1Q92598 858 aa12.03□□□□□ -0.48
RFC4-202ENST00000392481 CELF6Q96J87 481 aaKnown RBP12.03□□□□□ -0.48
RFC4-202ENST00000392481 GDAP1L1Q96MZ0 367 aa12.03□□□□□ -0.48
RFC4-202ENST00000392481 PACSIN1Q9BY11 444 aa12.03□□□□□ -0.48
RFC4-202ENST00000392481 SLC39A8Q9C0K1 460 aa12.03□□□□□ -0.48
RFC4-202ENST00000392481 ZDHHC6Q9H6R6 413 aa12.03□□□□□ -0.48
RFC4-202ENST00000392481 EBF2Q9HAK2 575 aa12.03□□□□□ -0.48
RFC4-202ENST00000392481 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.03□□□□□ -0.48
RFC4-202ENST00000392481 A0A1B0GVT2 93 aa12.03□□□□□ -0.48
RFC4-202ENST00000392481 RNF103O00237 685 aa12.03□□□□□ -0.48
RFC4-202ENST00000392481 KRIT1O00522 736 aa12.03□□□□□ -0.48
RFC4-202ENST00000392481 PRAMEF11O60813 436 aa12.03□□□□□ -0.48
RFC4-202ENST00000392481 GJB3O75712 270 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms