RNA–Protein interactions for RNA: ENST00000392449.4

PTPRK-208, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 2

Gene PTPRK, Length 1,456 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-208ENST00000392449 FGL2Q14314 439 aa16.91■□□□□ 0.3
PTPRK-208ENST00000392449 RETSATQ6NUM9 610 aa16.91■□□□□ 0.3
PTPRK-208ENST00000392449 ZNF783Q6ZMS7 281 aa16.91■□□□□ 0.3
PTPRK-208ENST00000392449 KDM7AQ6ZMT4 941 aa16.91■□□□□ 0.3
PTPRK-208ENST00000392449 IQCHQ86VS3 1027 aa16.91■□□□□ 0.3
PTPRK-208ENST00000392449 NLRP14Q86W24 1093 aa16.91■□□□□ 0.3
PTPRK-208ENST00000392449 PYROXD2Q8N2H3 581 aa16.91■□□□□ 0.3
PTPRK-208ENST00000392449 OR13H1Q8NG92 308 aa16.91■□□□□ 0.3
PTPRK-208ENST00000392449 KLHDC7BQ96G42 594 aa16.91■□□□□ 0.3
PTPRK-208ENST00000392449 CALN1Q9BXU9 219 aa16.91■□□□□ 0.3
PTPRK-208ENST00000392449 HSD3B7Q9H2F3 369 aa16.91■□□□□ 0.3
PTPRK-208ENST00000392449 ZDHHC6Q9H6R6 413 aa16.91■□□□□ 0.3
PTPRK-208ENST00000392449 SEPT11Q9NVA2 429 aaKnown RBP16.91■□□□□ 0.3
PTPRK-208ENST00000392449 UCKL1Q9NWZ5 548 aa16.91■□□□□ 0.3
PTPRK-208ENST00000392449 CACNA1GO43497 2377 aa16.91■□□□□ 0.3
PTPRK-208ENST00000392449 MYLKQ15746 1914 aa16.9■□□□□ 0.3
PTPRK-208ENST00000392449 LGALS16A8MUM7 142 aa16.9■□□□□ 0.3
PTPRK-208ENST00000392449 TRIM38O00635 465 aa16.9■□□□□ 0.3
PTPRK-208ENST00000392449 RFPL3O75679 317 aa16.9■□□□□ 0.3
PTPRK-208ENST00000392449 TPM2P07951 284 aa16.9■□□□□ 0.3
PTPRK-208ENST00000392449 NUDT1P36639 197 aa16.9■□□□□ 0.3
PTPRK-208ENST00000392449 PTPN9P43378 593 aa16.9■□□□□ 0.3
PTPRK-208ENST00000392449 NSFP46459 744 aaKnown RBP16.9■□□□□ 0.3
PTPRK-208ENST00000392449 CLEC16AQ2KHT3 1053 aa16.9■□□□□ 0.3
PTPRK-208ENST00000392449 CARD16Q5EG05 197 aa16.9■□□□□ 0.3
PTPRK-208ENST00000392449 ACBD5Q5T8D3 534 aaPredicted RBP16.9■□□□□ 0.3
PTPRK-208ENST00000392449 GCNT7Q6ZNI0 430 aa16.9■□□□□ 0.3
PTPRK-208ENST00000392449 PARS2Q7L3T8 475 aaKnown RBP16.9■□□□□ 0.3
PTPRK-208ENST00000392449 SLC22A18ASQ8N1D0 253 aa16.9■□□□□ 0.3
PTPRK-208ENST00000392449 SLC25A45Q8N413 288 aa16.9■□□□□ 0.3
PTPRK-208ENST00000392449 PCDH20Q8N6Y1 951 aaKnown RBP16.9■□□□□ 0.3
PTPRK-208ENST00000392449 NEK11Q8NG66 645 aa16.9■□□□□ 0.3
PTPRK-208ENST00000392449 TSC1Q92574 1164 aa16.9■□□□□ 0.3
PTPRK-208ENST00000392449 ARHGEF2Q92974 986 aaKnown RBP16.9■□□□□ 0.3
PTPRK-208ENST00000392449 HDAC8Q9BY41 377 aa16.9■□□□□ 0.3
PTPRK-208ENST00000392449 ADAM22Q9P0K1 906 aa16.9■□□□□ 0.3
PTPRK-208ENST00000392449 LIMA1Q9UHB6 759 aaKnown RBP16.9■□□□□ 0.3
PTPRK-208ENST00000392449 GGT7Q9UJ14 662 aa16.9■□□□□ 0.3
PTPRK-208ENST00000392449 ITM2BQ9Y287 266 aa16.9■□□□□ 0.3
PTPRK-208ENST00000392449 RAD51BO15315 384 aa16.89■□□□□ 0.29
PTPRK-208ENST00000392449 PLEKP08567 350 aaPredicted RBP16.89■□□□□ 0.29
PTPRK-208ENST00000392449 KRT3P12035 628 aa16.89■□□□□ 0.29
PTPRK-208ENST00000392449 ADRB3P13945 408 aa16.89■□□□□ 0.29
PTPRK-208ENST00000392449 NEK3P51956 506 aa16.89■□□□□ 0.29
PTPRK-208ENST00000392449 MYL5Q02045 173 aa16.89■□□□□ 0.29
PTPRK-208ENST00000392449 UBXN1Q04323 297 aa16.89■□□□□ 0.29
PTPRK-208ENST00000392449 OVGP1Q12889 678 aa16.89■□□□□ 0.29
PTPRK-208ENST00000392449 ARL13BQ3SXY8 428 aa16.89■□□□□ 0.29
PTPRK-208ENST00000392449 TMEM259Q4ZIN3 620 aa16.89■□□□□ 0.29
PTPRK-208ENST00000392449 ZNF542PQ5EBM4 170 aa16.89■□□□□ 0.29
PTPRK-208ENST00000392449 WDR59Q6PJI9 974 aa16.89■□□□□ 0.29
PTPRK-208ENST00000392449 SASS6Q6UVJ0 657 aa16.89■□□□□ 0.29
PTPRK-208ENST00000392449 TRIM72Q6ZMU5 477 aa16.89■□□□□ 0.29
PTPRK-208ENST00000392449 STRADAQ7RTN6 431 aa16.89■□□□□ 0.29
PTPRK-208ENST00000392449 APTXQ7Z2E3 356 aaKnown RBP16.89■□□□□ 0.29
PTPRK-208ENST00000392449 RYBPQ8N488 228 aaPredicted RBP16.89■□□□□ 0.29
PTPRK-208ENST00000392449 OXR1Q8N573 874 aa16.89■□□□□ 0.29
PTPRK-208ENST00000392449 HNRNPLLQ8WVV9 542 aaKnown RBP16.89■□□□□ 0.29
PTPRK-208ENST00000392449 CENPIQ92674 756 aaPredicted RBP16.89■□□□□ 0.29
PTPRK-208ENST00000392449 VOPP1Q96AW1 172 aa16.89■□□□□ 0.29
PTPRK-208ENST00000392449 HEPHQ9BQS7 1158 aa16.89■□□□□ 0.29
PTPRK-208ENST00000392449 CEP44Q9C0F1 390 aa16.89■□□□□ 0.29
PTPRK-208ENST00000392449 OSBPL2Q9H1P3 480 aa16.89■□□□□ 0.29
PTPRK-208ENST00000392449 HECAQ9UBI9 543 aaPredicted RBP16.89■□□□□ 0.29
PTPRK-208ENST00000392449 PCDHGA1Q9Y5H4 931 aa16.89■□□□□ 0.29
PTPRK-208ENST00000392449 FFAR2O15552 330 aa16.88■□□□□ 0.29
PTPRK-208ENST00000392449 SIGLEC6O43699 453 aa16.88■□□□□ 0.29
PTPRK-208ENST00000392449 MYF5P13349 255 aa16.88■□□□□ 0.29
PTPRK-208ENST00000392449 ATP1A3P13637 1013 aa16.88■□□□□ 0.29
PTPRK-208ENST00000392449 RHOQP17081 205 aa16.88■□□□□ 0.29
PTPRK-208ENST00000392449 GPD1P21695 349 aa16.88■□□□□ 0.29
PTPRK-208ENST00000392449 HNRNPA2B1P22626 353 aaKnown RBP16.88■□□□□ 0.29
PTPRK-208ENST00000392449 ITGB7P26010 798 aa16.88■□□□□ 0.29
PTPRK-208ENST00000392449 AKT2P31751 481 aa16.88■□□□□ 0.29
PTPRK-208ENST00000392449 ABL2P42684 1182 aa16.88■□□□□ 0.29
PTPRK-208ENST00000392449 NRG1Q02297 640 aaPredicted RBP16.88■□□□□ 0.29
PTPRK-208ENST00000392449 NCAPHQ15003 741 aa16.88■□□□□ 0.29
PTPRK-208ENST00000392449 STX1AQ16623 288 aa16.88■□□□□ 0.29
PTPRK-208ENST00000392449 COL28A1Q2UY09 1125 aa16.88■□□□□ 0.29
PTPRK-208ENST00000392449 LRRC73Q5JTD7 316 aa16.88■□□□□ 0.29
PTPRK-208ENST00000392449 ATXN7L2Q5T6C5 722 aaPredicted RBP16.88■□□□□ 0.29
PTPRK-208ENST00000392449 HES3Q5TGS1 186 aa16.88■□□□□ 0.29
PTPRK-208ENST00000392449 NEK5Q6P3R8 708 aa16.88■□□□□ 0.29
PTPRK-208ENST00000392449 FBXL19Q6PCT2 694 aa16.88■□□□□ 0.29
PTPRK-208ENST00000392449 MON1BQ7L1V2 547 aa16.88■□□□□ 0.29
PTPRK-208ENST00000392449 PHF13Q86YI8 300 aaPredicted RBP16.88■□□□□ 0.29
PTPRK-208ENST00000392449 TBC1D31Q96DN5 1066 aa16.88■□□□□ 0.29
PTPRK-208ENST00000392449 PPP1R16AQ96I34 528 aa16.88■□□□□ 0.29
PTPRK-208ENST00000392449 SELENOOQ9BVL4 669 aa16.88■□□□□ 0.29
PTPRK-208ENST00000392449 KLC2Q9H0B6 622 aa16.88■□□□□ 0.29
PTPRK-208ENST00000392449 TMEM51Q9NW97 253 aa16.88■□□□□ 0.29
PTPRK-208ENST00000392449 TMEM248Q9NWD8 314 aa16.88■□□□□ 0.29
PTPRK-208ENST00000392449 FADS3Q9Y5Q0 445 aa16.88■□□□□ 0.29
PTPRK-208ENST00000392449 POM121BA6NF01 834 aa16.87■□□□□ 0.29
PTPRK-208ENST00000392449 CCP110O43303 1012 aa16.87■□□□□ 0.29
PTPRK-208ENST00000392449 MAGEC1O60732 1142 aa16.87■□□□□ 0.29
PTPRK-208ENST00000392449 PAK4O96013 591 aaPredicted RBP16.87■□□□□ 0.29
PTPRK-208ENST00000392449 DGKAP23743 735 aa16.87■□□□□ 0.29
PTPRK-208ENST00000392449 L1CAMP32004 1257 aa16.87■□□□□ 0.29
PTPRK-208ENST00000392449 MAPKAPK2P49137 400 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms