RNA–Protein interactions for RNA: ENST00000391941.6

ERCC2-201, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC2, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-201ENST00000391941 NAT9Q9BTE0 207 aa18.27■□□□□ 0.52
ERCC2-201ENST00000391941 NXF3Q9H4D5 531 aaKnown RBP18.27■□□□□ 0.52
ERCC2-201ENST00000391941 Q9H521 79 aa18.27■□□□□ 0.52
ERCC2-201ENST00000391941 LRRC40Q9H9A6 602 aa18.27■□□□□ 0.52
ERCC2-201ENST00000391941 EIF2B3Q9NR50 452 aaKnown RBP18.27■□□□□ 0.52
ERCC2-201ENST00000391941 EBF1Q9UH73 591 aa18.27■□□□□ 0.52
ERCC2-201ENST00000391941 TLK1Q9UKI8 766 aa18.27■□□□□ 0.52
ERCC2-201ENST00000391941 ARHGEF37A1IGU5 675 aa18.27■□□□□ 0.51
ERCC2-201ENST00000391941 PRORSD1PA6NEY8 169 aa18.27■□□□□ 0.51
ERCC2-201ENST00000391941 KPNA7A9QM74 516 aa18.27■□□□□ 0.51
ERCC2-201ENST00000391941 EEF2KO00418 725 aaKnown RBP18.27■□□□□ 0.51
ERCC2-201ENST00000391941 AHSGP02765 367 aa18.27■□□□□ 0.51
ERCC2-201ENST00000391941 SLC35E2BP0CK96 405 aa18.27■□□□□ 0.51
ERCC2-201ENST00000391941 CXCR3P49682 368 aa18.27■□□□□ 0.51
ERCC2-201ENST00000391941 CTBSQ01459 385 aa18.27■□□□□ 0.51
ERCC2-201ENST00000391941 ARHGAP36Q6ZRI8 547 aa18.27■□□□□ 0.51
ERCC2-201ENST00000391941 SLC7A14Q8TBB6 771 aa18.27■□□□□ 0.51
ERCC2-201ENST00000391941 SLCO4A1Q96BD0 722 aa18.27■□□□□ 0.51
ERCC2-201ENST00000391941 ZBTB26Q9HCK0 441 aa18.27■□□□□ 0.51
ERCC2-201ENST00000391941 BFARQ9NZS9 450 aa18.27■□□□□ 0.51
ERCC2-201ENST00000391941 RAB26Q9ULW5 256 aa18.27■□□□□ 0.51
ERCC2-201ENST00000391941 RAP2CQ9Y3L5 183 aa18.27■□□□□ 0.51
ERCC2-201ENST00000391941 PTGDR2Q9Y5Y4 395 aa18.27■□□□□ 0.51
ERCC2-201ENST00000391941 LAMA2P24043 3122 aaKnown RBP18.27■□□□□ 0.51
ERCC2-201ENST00000391941 HACD1B0YJ81 288 aa18.26■□□□□ 0.51
ERCC2-201ENST00000391941 PGK1P00558 417 aa18.26■□□□□ 0.51
ERCC2-201ENST00000391941 JCHAINP01591 159 aa18.26■□□□□ 0.51
ERCC2-201ENST00000391941 APOFQ13790 326 aa18.26■□□□□ 0.51
ERCC2-201ENST00000391941 SLC26A9Q7LBE3 791 aa18.26■□□□□ 0.51
ERCC2-201ENST00000391941 CHST15Q7LFX5 561 aaPredicted RBP18.26■□□□□ 0.51
ERCC2-201ENST00000391941 RP9Q8TA86 221 aaKnown RBP18.26■□□□□ 0.51
ERCC2-201ENST00000391941 CAMKK2Q96RR4 588 aa18.26■□□□□ 0.51
ERCC2-201ENST00000391941 DRC3Q9H069 523 aa18.26■□□□□ 0.51
ERCC2-201ENST00000391941 OSBPL2Q9H1P3 480 aa18.26■□□□□ 0.51
ERCC2-201ENST00000391941 SOX17Q9H6I2 414 aaPredicted RBP18.26■□□□□ 0.51
ERCC2-201ENST00000391941 CHST12Q9NRB3 414 aa18.26■□□□□ 0.51
ERCC2-201ENST00000391941 PRPF19Q9UMS4 504 aaKnown RBP18.26■□□□□ 0.51
ERCC2-201ENST00000391941 DMTF1Q9Y222 760 aa18.26■□□□□ 0.51
ERCC2-201ENST00000391941 YWHAQP27348 245 aa18.26■□□□□ 0.51
ERCC2-201ENST00000391941 NSUN2Q08J23 767 aaKnown RBP eCLIP18.26■□□□□ 0.51
ERCC2-201ENST00000391941 LAMC2Q13753 1193 aa18.26■□□□□ 0.51
ERCC2-201ENST00000391941 SPANXN3Q5MJ09 141 aa18.26■□□□□ 0.51
ERCC2-201ENST00000391941 KLHL35Q6PF15 583 aa18.26■□□□□ 0.51
ERCC2-201ENST00000391941 PGAM4Q8N0Y7 254 aa18.26■□□□□ 0.51
ERCC2-201ENST00000391941 AHI1Q8N157 1196 aa18.26■□□□□ 0.51
ERCC2-201ENST00000391941 LPGAT1Q92604 370 aa18.26■□□□□ 0.51
ERCC2-201ENST00000391941 EDEM1Q92611 657 aa18.26■□□□□ 0.51
ERCC2-201ENST00000391941 PHF21BQ96EK2 531 aa18.26■□□□□ 0.51
ERCC2-201ENST00000391941 C1QTNF1Q9BXJ1 281 aa18.26■□□□□ 0.51
ERCC2-201ENST00000391941 ARHGEF38Q9NXL2 777 aa18.26■□□□□ 0.51
ERCC2-201ENST00000391941 GTF2IRD1Q9UHL9 959 aa18.26■□□□□ 0.51
ERCC2-201ENST00000391941 SSC5DA1L4H1 1573 aa18.26■□□□□ 0.51
ERCC2-201ENST00000391941 TMEM114B3SHH9 223 aa18.25■□□□□ 0.51
ERCC2-201ENST00000391941 BOLA2-SMG1P6H3BVE0 249 aa18.25■□□□□ 0.51
ERCC2-201ENST00000391941 CCL22O00626 93 aa18.25■□□□□ 0.51
ERCC2-201ENST00000391941 BCAS2O75934 225 aaPredicted RBP18.25■□□□□ 0.51
ERCC2-201ENST00000391941 C1QTNF8P60827 252 aa18.25■□□□□ 0.51
ERCC2-201ENST00000391941 PSME3P61289 254 aa18.25■□□□□ 0.51
ERCC2-201ENST00000391941 LIPMQ5VYY2 423 aa18.25■□□□□ 0.51
ERCC2-201ENST00000391941 CLEC6AQ6EIG7 209 aa18.25■□□□□ 0.51
ERCC2-201ENST00000391941 MOB2Q70IA6 237 aa18.25■□□□□ 0.51
ERCC2-201ENST00000391941 LPCAT2Q7L5N7 544 aa18.25■□□□□ 0.51
ERCC2-201ENST00000391941 TXNDC5Q8NBS9 432 aaKnown RBP18.25■□□□□ 0.51
ERCC2-201ENST00000391941 ZNF696Q9H7X3 374 aa18.25■□□□□ 0.51
ERCC2-201ENST00000391941 PCDHGA7Q9Y5G6 932 aa18.25■□□□□ 0.51
ERCC2-201ENST00000391941 PENKP01210 267 aaPredicted RBP18.25■□□□□ 0.51
ERCC2-201ENST00000391941 MT-ND1P03886 318 aa18.25■□□□□ 0.51
ERCC2-201ENST00000391941 HNRNPCP07910 306 aaKnown RBP eCLIP18.25■□□□□ 0.51
ERCC2-201ENST00000391941 ENTPD1P49961 510 aa18.25■□□□□ 0.51
ERCC2-201ENST00000391941 PSMD7P51665 324 aa18.25■□□□□ 0.51
ERCC2-201ENST00000391941 SH3BGRP55822 239 aaPredicted RBP18.25■□□□□ 0.51
ERCC2-201ENST00000391941 AGKQ53H12 422 aa18.25■□□□□ 0.51
ERCC2-201ENST00000391941 HMBOX1Q6NT76 420 aa18.25■□□□□ 0.51
ERCC2-201ENST00000391941 TMEM135Q86UB9 458 aa18.25■□□□□ 0.51
ERCC2-201ENST00000391941 PSTKQ8IV42 348 aaKnown RBP18.25■□□□□ 0.51
ERCC2-201ENST00000391941 ISL2Q96A47 359 aa18.25■□□□□ 0.51
ERCC2-201ENST00000391941 ZNF419Q96HQ0 510 aaPredicted RBP18.25■□□□□ 0.51
ERCC2-201ENST00000391941 EFCAB1Q9HAE3 211 aa18.25■□□□□ 0.51
ERCC2-201ENST00000391941 FBP2O00757 339 aa18.24■□□□□ 0.51
ERCC2-201ENST00000391941 SETSIPP0DME0 302 aa18.24■□□□□ 0.51
ERCC2-201ENST00000391941 VGLL4Q14135 290 aa18.24■□□□□ 0.51
ERCC2-201ENST00000391941 ZNF789Q5FWF6 425 aa18.24■□□□□ 0.51
ERCC2-201ENST00000391941 HERC6Q8IVU3 1022 aa18.24■□□□□ 0.51
ERCC2-201ENST00000391941 FAM47BQ8NA70 645 aa18.24■□□□□ 0.51
ERCC2-201ENST00000391941 AP4S1Q9Y587 144 aa18.24■□□□□ 0.51
ERCC2-201ENST00000391941 SOCS2O14508 198 aa18.24■□□□□ 0.51
ERCC2-201ENST00000391941 MATKP42679 507 aa18.24■□□□□ 0.51
ERCC2-201ENST00000391941 BST2Q10589 180 aaKnown RBP18.24■□□□□ 0.51
ERCC2-201ENST00000391941 IKBKEQ14164 716 aa18.24■□□□□ 0.51
ERCC2-201ENST00000391941 FBXO48Q5FWF7 155 aa18.24■□□□□ 0.51
ERCC2-201ENST00000391941 LDB1Q86U70 411 aaPredicted RBP18.24■□□□□ 0.51
ERCC2-201ENST00000391941 ZC3HC1Q86WB0 502 aaKnown RBP18.24■□□□□ 0.51
ERCC2-201ENST00000391941 ZDHHC17Q8IUH5 632 aa18.24■□□□□ 0.51
ERCC2-201ENST00000391941 CHERPQ8IWX8 916 aaKnown RBP18.24■□□□□ 0.51
ERCC2-201ENST00000391941 KDM1BQ8NB78 822 aa18.24■□□□□ 0.51
ERCC2-201ENST00000391941 SH3RF2Q8TEC5 729 aa18.24■□□□□ 0.51
ERCC2-201ENST00000391941 CNDP1Q96KN2 507 aa18.24■□□□□ 0.51
ERCC2-201ENST00000391941 RNF39Q9H2S5 420 aa18.24■□□□□ 0.51
ERCC2-201ENST00000391941 EGFL7Q9UHF1 273 aa18.24■□□□□ 0.51
ERCC2-201ENST00000391941 ADAM28Q9UKQ2 775 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms