RNA–Protein interactions for RNA: ENST00000391814.5

SHANK1-204, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK1, Length 6,622 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-204ENST00000391814 ASB14A6NK59 587 aa16.33■□□□□ 0.2
SHANK1-204ENST00000391814 F8VP50 259 aa16.33■□□□□ 0.2
SHANK1-204ENST00000391814 H0Y858 1186 aa16.33■□□□□ 0.2
SHANK1-204ENST00000391814 KDELR1P24390 212 aa16.33■□□□□ 0.2
SHANK1-204ENST00000391814 RFX4Q33E94 735 aa16.33■□□□□ 0.2
SHANK1-204ENST00000391814 MPZL3Q6UWV2 235 aa16.33■□□□□ 0.2
SHANK1-204ENST00000391814 ZSCAN2Q7Z7L9 614 aaPredicted RBP16.33■□□□□ 0.2
SHANK1-204ENST00000391814 GMCL1Q96IK5 515 aa16.33■□□□□ 0.2
SHANK1-204ENST00000391814 ABCA8O94911 1581 aa16.33■□□□□ 0.2
SHANK1-204ENST00000391814 BTNL10A8MVZ5 291 aa16.33■□□□□ 0.2
SHANK1-204ENST00000391814 IFRD1O00458 451 aaPredicted RBP16.33■□□□□ 0.2
SHANK1-204ENST00000391814 RAB27AP51159 221 aa16.33■□□□□ 0.2
SHANK1-204ENST00000391814 CDH18Q13634 790 aa16.33■□□□□ 0.2
SHANK1-204ENST00000391814 CLNKQ7Z7G1 428 aa16.33■□□□□ 0.2
SHANK1-204ENST00000391814 PNMA5Q96PV4 448 aa16.33■□□□□ 0.2
SHANK1-204ENST00000391814 RBM22Q9NW64 420 aaKnown RBP eCLIP16.33■□□□□ 0.2
SHANK1-204ENST00000391814 TM7SF2O76062 418 aa16.33■□□□□ 0.2
SHANK1-204ENST00000391814 PSMB4P28070 264 aa16.33■□□□□ 0.2
SHANK1-204ENST00000391814 RAB25P57735 213 aa16.33■□□□□ 0.2
SHANK1-204ENST00000391814 GALNT15Q8N3T1 639 aa16.33■□□□□ 0.2
SHANK1-204ENST00000391814 ITFG2Q969R8 447 aa16.33■□□□□ 0.2
SHANK1-204ENST00000391814 TDRD1Q9BXT4 1180 aaKnown RBP16.33■□□□□ 0.2
SHANK1-204ENST00000391814 C17orf75Q9HAS0 396 aa16.33■□□□□ 0.2
SHANK1-204ENST00000391814 ARHGAP28Q9P2N2 729 aa16.33■□□□□ 0.2
SHANK1-204ENST00000391814 LEF1Q9UJU2 399 aaPredicted RBP16.33■□□□□ 0.2
SHANK1-204ENST00000391814 EPHB6O15197 1021 aa16.33■□□□□ 0.2
SHANK1-204ENST00000391814 DDX3YO15523 660 aaKnown RBP16.33■□□□□ 0.2
SHANK1-204ENST00000391814 RCVRNP35243 200 aa16.33■□□□□ 0.2
SHANK1-204ENST00000391814 VPS72Q15906 364 aa16.33■□□□□ 0.2
SHANK1-204ENST00000391814 NXNL1Q96CM4 212 aa16.33■□□□□ 0.2
SHANK1-204ENST00000391814 SLC4A9Q96Q91 983 aa16.33■□□□□ 0.2
SHANK1-204ENST00000391814 ZNF12P17014 697 aa16.32■□□□□ 0.2
SHANK1-204ENST00000391814 IFNGR2P38484 337 aa16.32■□□□□ 0.2
SHANK1-204ENST00000391814 MTHFRP42898 656 aa16.32■□□□□ 0.2
SHANK1-204ENST00000391814 ZC3H7AQ8IWR0 971 aaKnown RBP16.32■□□□□ 0.2
SHANK1-204ENST00000391814 CLEC4AQ9UMR7 237 aa16.32■□□□□ 0.2
SHANK1-204ENST00000391814 CHRNGP07510 517 aa16.32■□□□□ 0.2
SHANK1-204ENST00000391814 TCF4P15884 667 aa16.32■□□□□ 0.2
SHANK1-204ENST00000391814 ITGALP20701 1170 aa16.32■□□□□ 0.2
SHANK1-204ENST00000391814 PNPLA4P41247 253 aa16.32■□□□□ 0.2
SHANK1-204ENST00000391814 CYP4F8P98187 520 aa16.32■□□□□ 0.2
SHANK1-204ENST00000391814 EIF2B5Q13144 721 aaKnown RBP16.32■□□□□ 0.2
SHANK1-204ENST00000391814 KCTD8Q6ZWB6 473 aa16.32■□□□□ 0.2
SHANK1-204ENST00000391814 SV2AQ7L0J3 742 aa16.32■□□□□ 0.2
SHANK1-204ENST00000391814 PRELID2Q8N945 189 aa16.32■□□□□ 0.2
SHANK1-204ENST00000391814 OR52K1Q8NGK4 314 aa16.32■□□□□ 0.2
SHANK1-204ENST00000391814 Q96MT0 163 aa16.32■□□□□ 0.2
SHANK1-204ENST00000391814 MIPP30301 263 aa16.32■□□□□ 0.2
SHANK1-204ENST00000391814 PTPN11Q06124 597 aaPredicted RBP16.32■□□□□ 0.2
SHANK1-204ENST00000391814 KCNA10Q16322 511 aa16.32■□□□□ 0.2
SHANK1-204ENST00000391814 CA9Q16790 459 aa16.32■□□□□ 0.2
SHANK1-204ENST00000391814 TMEM119Q4V9L6 283 aa16.32■□□□□ 0.2
SHANK1-204ENST00000391814 OGFOD2Q6N063 350 aa16.32■□□□□ 0.2
SHANK1-204ENST00000391814 ZNF662Q6ZS27 426 aa16.32■□□□□ 0.2
SHANK1-204ENST00000391814 DCP1BQ8IZD4 617 aaKnown RBP16.32■□□□□ 0.2
SHANK1-204ENST00000391814 KCTD4Q8WVF5 259 aa16.32■□□□□ 0.2
SHANK1-204ENST00000391814 MNTQ99583 582 aa16.32■□□□□ 0.2
SHANK1-204ENST00000391814 TMEM216Q9P0N5 145 aa16.32■□□□□ 0.2
SHANK1-204ENST00000391814 KDM6AO15550 1401 aaPredicted RBP16.32■□□□□ 0.2
SHANK1-204ENST00000391814 LTA4HP09960 611 aaKnown RBP16.32■□□□□ 0.2
SHANK1-204ENST00000391814 STAG3L1P0CL83 205 aa16.32■□□□□ 0.2
SHANK1-204ENST00000391814 RALGDSQ12967 914 aa16.32■□□□□ 0.2
SHANK1-204ENST00000391814 KCNT2Q6UVM3 1135 aa16.32■□□□□ 0.2
SHANK1-204ENST00000391814 ILDR2Q71H61 639 aa16.32■□□□□ 0.2
SHANK1-204ENST00000391814 TBC1D21Q8IYX1 336 aa16.32■□□□□ 0.2
SHANK1-204ENST00000391814 OSBPL7Q9BZF2 842 aa16.32■□□□□ 0.2
SHANK1-204ENST00000391814 RPS6KA6Q9UK32 745 aa16.32■□□□□ 0.2
SHANK1-204ENST00000391814 ITGA11Q9UKX5 1188 aa16.32■□□□□ 0.2
SHANK1-204ENST00000391814 AXIN2Q9Y2T1 843 aa16.32■□□□□ 0.2
SHANK1-204ENST00000391814 FADS3Q9Y5Q0 445 aa16.32■□□□□ 0.2
SHANK1-204ENST00000391814 ODC1P11926 461 aa16.32■□□□□ 0.2
SHANK1-204ENST00000391814 NAMPTP43490 491 aa16.32■□□□□ 0.2
SHANK1-204ENST00000391814 RBBP4Q09028 425 aa16.32■□□□□ 0.2
SHANK1-204ENST00000391814 LIN54Q6MZP7 749 aa16.32■□□□□ 0.2
SHANK1-204ENST00000391814 GPSM1Q86YR5 675 aa16.32■□□□□ 0.2
SHANK1-204ENST00000391814 KLHL28Q9NXS3 571 aa16.32■□□□□ 0.2
SHANK1-204ENST00000391814 HACD1B0YJ81 288 aa16.31■□□□□ 0.2
SHANK1-204ENST00000391814 APOC4-APOC2K7ER74 178 aa16.31■□□□□ 0.2
SHANK1-204ENST00000391814 AVILO75366 819 aa16.31■□□□□ 0.2
SHANK1-204ENST00000391814 STX11O75558 287 aa16.31■□□□□ 0.2
SHANK1-204ENST00000391814 APOC2P02655 101 aa16.31■□□□□ 0.2
SHANK1-204ENST00000391814 MYL9P24844 172 aa16.31■□□□□ 0.2
SHANK1-204ENST00000391814 TGFBR2P37173 567 aa16.31■□□□□ 0.2
SHANK1-204ENST00000391814 NOTUMQ6P988 496 aa16.31■□□□□ 0.2
SHANK1-204ENST00000391814 BTN2A1Q7KYR7 527 aa16.31■□□□□ 0.2
SHANK1-204ENST00000391814 DSELQ8IZU8 1212 aa16.31■□□□□ 0.2
SHANK1-204ENST00000391814 ZNF606Q8WXB4 792 aa16.31■□□□□ 0.2
SHANK1-204ENST00000391814 LRTOMTQ8WZ04 291 aa16.31■□□□□ 0.2
SHANK1-204ENST00000391814 GPATCH1Q9BRR8 931 aaKnown RBP16.31■□□□□ 0.2
SHANK1-204ENST00000391814 LRRC19Q9H756 370 aa16.31■□□□□ 0.2
SHANK1-204ENST00000391814 TAL1P17542 331 aaPredicted RBP16.31■□□□□ 0.2
SHANK1-204ENST00000391814 ZNF613Q6PF04 617 aa16.31■□□□□ 0.2
SHANK1-204ENST00000391814 DEPDC4Q8N2C3 294 aa16.31■□□□□ 0.2
SHANK1-204ENST00000391814 ADI1Q9BV57 179 aa16.31■□□□□ 0.2
SHANK1-204ENST00000391814 NMUR2Q9GZQ4 415 aa16.31■□□□□ 0.2
SHANK1-204ENST00000391814 RAP2CQ9Y3L5 183 aa16.31■□□□□ 0.2
SHANK1-204ENST00000391814 PRKAB1Q9Y478 270 aa16.31■□□□□ 0.2
SHANK1-204ENST00000391814 NAGLUP54802 743 aa16.31■□□□□ 0.2
SHANK1-204ENST00000391814 PACS1Q6VY07 963 aa16.31■□□□□ 0.2
SHANK1-204ENST00000391814 UBE2Q1Q7Z7E8 422 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms