RNA–Protein interactions for RNA: ENST00000390654.7

COL23A1-201, Transcript of collagen type XXIII alpha 1 chain, humanhuman

APPRIS P2 TSL 5 BASIC

Gene COL23A1, Length 3,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1-201ENST00000390654 TMEM114B3SHH9 223 aa21.28■■□□□ 1
COL23A1-201ENST00000390654 XPO1O14980 1071 aaKnown RBP21.28■■□□□ 1
COL23A1-201ENST00000390654 NPR3P17342 541 aa21.28■■□□□ 1
COL23A1-201ENST00000390654 ME2P23368 584 aa21.28■■□□□ 1
COL23A1-201ENST00000390654 PAFAH1B3Q15102 231 aaKnown RBP21.28■■□□□ 1
COL23A1-201ENST00000390654 KYAT1Q16773 422 aa21.28■■□□□ 1
COL23A1-201ENST00000390654 PPP1R3AQ16821 1122 aa21.28■■□□□ 1
COL23A1-201ENST00000390654 ANO4Q32M45 955 aa21.28■■□□□ 1
COL23A1-201ENST00000390654 KIAA0319Q5VV43 1072 aa21.28■■□□□ 1
COL23A1-201ENST00000390654 MFSD6LQ8IWD5 586 aa21.28■■□□□ 1
COL23A1-201ENST00000390654 RP9Q8TA86 221 aaKnown RBP21.28■■□□□ 1
COL23A1-201ENST00000390654 EME1Q96AY2 570 aa21.28■■□□□ 1
COL23A1-201ENST00000390654 PRICKLE1Q96MT3 831 aaPredicted RBP21.28■■□□□ 1
COL23A1-201ENST00000390654 DUSP16Q9BY84 665 aa21.28■■□□□ 1
COL23A1-201ENST00000390654 TMEM30AQ9NV96 361 aa21.28■■□□□ 1
COL23A1-201ENST00000390654 C6orf203Q9P0P8 240 aaPredicted RBP21.28■■□□□ 1
COL23A1-201ENST00000390654 GTF2IRD1Q9UHL9 959 aa21.28■■□□□ 1
COL23A1-201ENST00000390654 ATP6AP2A0A1C7CYW4 349 aa21.28■■□□□ 1
COL23A1-201ENST00000390654 MEIS3P2A8K0S8 358 aa21.28■■□□□ 1
COL23A1-201ENST00000390654 ATP6AP2O75787 350 aa21.28■■□□□ 1
COL23A1-201ENST00000390654 YBX3P16989 372 aaKnown RBP eCLIP21.28■■□□□ 1
COL23A1-201ENST00000390654 SOX11P35716 441 aa21.28■■□□□ 1
COL23A1-201ENST00000390654 PTK2BQ14289 1009 aa21.28■■□□□ 1
COL23A1-201ENST00000390654 PAN2Q504Q3 1202 aaKnown RBP21.28■■□□□ 1
COL23A1-201ENST00000390654 LRRC23Q53EV4 343 aaPredicted RBP21.28■■□□□ 1
COL23A1-201ENST00000390654 NOMO2Q5JPE7 1267 aa21.28■■□□□ 1
COL23A1-201ENST00000390654 PDCD6IPQ8WUM4 868 aaKnown RBP21.28■■□□□ 1
COL23A1-201ENST00000390654 NCSTNQ92542 709 aa21.28■■□□□ 1
COL23A1-201ENST00000390654 BTBD9Q96Q07 612 aa21.28■■□□□ 1
COL23A1-201ENST00000390654 SLC39A3Q9BRY0 314 aa21.28■■□□□ 1
COL23A1-201ENST00000390654 LIN28AQ9H9Z2 209 aaKnown RBP21.28■■□□□ 1
COL23A1-201ENST00000390654 ADARB2Q9NS39 739 aaKnown RBP21.28■■□□□ 1
COL23A1-201ENST00000390654 ADAM28Q9UKQ2 775 aa21.28■■□□□ 1
COL23A1-201ENST00000390654 UBQLN1Q9UMX0 589 aaKnown RBP21.28■■□□□ 1
COL23A1-201ENST00000390654 DAB1O75553 588 aa21.27■■□□□ 1
COL23A1-201ENST00000390654 EPHX2P34913 555 aa21.27■■□□□ 1
COL23A1-201ENST00000390654 TAF6P49848 677 aa21.27■■□□□ 1
COL23A1-201ENST00000390654 NME5P56597 212 aa21.27■■□□□ 1
COL23A1-201ENST00000390654 SEPT6Q14141 434 aa21.27■■□□□ 1
COL23A1-201ENST00000390654 METTL21CQ5VZV1 264 aa21.27■■□□□ 1
COL23A1-201ENST00000390654 ZYG11AQ6WRX3 759 aa21.27■■□□□ 1
COL23A1-201ENST00000390654 ARRDC4Q8NCT1 418 aa21.27■■□□□ 1
COL23A1-201ENST00000390654 MRPL1Q9BYD6 325 aaKnown RBP21.27■■□□□ 1
COL23A1-201ENST00000390654 PLEKHA5Q9HAU0 1116 aa21.27■■□□□ 1
COL23A1-201ENST00000390654 IRAK4Q9NWZ3 460 aa21.27■■□□□ 1
COL23A1-201ENST00000390654 PGK1P00558 417 aa21.27■■□□□ 1
COL23A1-201ENST00000390654 DCAF4L1Q3SXM0 396 aa21.27■■□□□ 1
COL23A1-201ENST00000390654 PHF21BQ96EK2 531 aa21.27■■□□□ 1
COL23A1-201ENST00000390654 ELMO2Q96JJ3 720 aa21.27■■□□□ 1
COL23A1-201ENST00000390654 C1QTNF1Q9BXJ1 281 aa21.27■■□□□ 1
COL23A1-201ENST00000390654 MROH8Q9H579 483 aa21.27■■□□□ 1
COL23A1-201ENST00000390654 TNFRSF12AQ9NP84 129 aa21.27■■□□□ 1
COL23A1-201ENST00000390654 PMPCBO75439 489 aa21.27■□□□□ 0.99
COL23A1-201ENST00000390654 CYP2C9P11712 490 aa21.27■□□□□ 0.99
COL23A1-201ENST00000390654 PCSK6P29122 969 aa21.27■□□□□ 0.99
COL23A1-201ENST00000390654 PRDX6P30041 224 aa21.27■□□□□ 0.99
COL23A1-201ENST00000390654 RPL5P46777 297 aaKnown RBP21.27■□□□□ 0.99
COL23A1-201ENST00000390654 LILRA4P59901 499 aa21.27■□□□□ 0.99
COL23A1-201ENST00000390654 MAP7Q14244 749 aa21.27■□□□□ 0.99
COL23A1-201ENST00000390654 LRRC8EQ6NSJ5 796 aa21.27■□□□□ 0.99
COL23A1-201ENST00000390654 NOTUMQ6P988 496 aa21.27■□□□□ 0.99
COL23A1-201ENST00000390654 PPTC7Q8NI37 304 aa21.27■□□□□ 0.99
COL23A1-201ENST00000390654 DGCR14Q96DF8 476 aaKnown RBP21.27■□□□□ 0.99
COL23A1-201ENST00000390654 TKTL2Q9H0I9 626 aa21.27■□□□□ 0.99
COL23A1-201ENST00000390654 EFCAB1Q9HAE3 211 aa21.27■□□□□ 0.99
COL23A1-201ENST00000390654 OR12D3Q9UGF7 316 aa21.27■□□□□ 0.99
COL23A1-201ENST00000390654 H3BSA7 217 aa21.26■□□□□ 0.99
COL23A1-201ENST00000390654 PIRO00625 290 aa21.26■□□□□ 0.99
COL23A1-201ENST00000390654 CXCL11O14625 94 aa21.26■□□□□ 0.99
COL23A1-201ENST00000390654 DDHD2O94830 711 aa21.26■□□□□ 0.99
COL23A1-201ENST00000390654 SNAI1O95863 264 aaPredicted RBP21.26■□□□□ 0.99
COL23A1-201ENST00000390654 XIAPP98170 497 aa21.26■□□□□ 0.99
COL23A1-201ENST00000390654 PRKAA1Q13131 559 aa21.26■□□□□ 0.99
COL23A1-201ENST00000390654 CSHL1Q14406 222 aa21.26■□□□□ 0.99
COL23A1-201ENST00000390654 MARVELD2Q8N4S9 558 aa21.26■□□□□ 0.99
COL23A1-201ENST00000390654 CNTD1Q8N815 330 aa21.26■□□□□ 0.99
COL23A1-201ENST00000390654 LRTOMTQ8WZ04 291 aa21.26■□□□□ 0.99
COL23A1-201ENST00000390654 TNIP3Q96KP6 325 aa21.26■□□□□ 0.99
COL23A1-201ENST00000390654 ZNF512Q96ME7 567 aaPredicted RBP21.26■□□□□ 0.99
COL23A1-201ENST00000390654 TRPC7Q9HCX4 862 aa21.26■□□□□ 0.99
COL23A1-201ENST00000390654 C9JVG2 144 aa21.26■□□□□ 0.99
COL23A1-201ENST00000390654 AFF1P51825 1210 aaKnown RBP21.26■□□□□ 0.99
COL23A1-201ENST00000390654 PDAP1Q13442 181 aaKnown RBP21.26■□□□□ 0.99
COL23A1-201ENST00000390654 GPRC5AQ8NFJ5 357 aa21.26■□□□□ 0.99
COL23A1-201ENST00000390654 OR9I1Q8NGQ6 314 aa21.26■□□□□ 0.99
COL23A1-201ENST00000390654 FAM110BQ8TC76 370 aa21.26■□□□□ 0.99
COL23A1-201ENST00000390654 GBA3Q9H227 469 aa21.26■□□□□ 0.99
COL23A1-201ENST00000390654 Q9H521 79 aa21.26■□□□□ 0.99
COL23A1-201ENST00000390654 WDR6Q9NNW5 1121 aaKnown RBP21.26■□□□□ 0.99
COL23A1-201ENST00000390654 RCOR3Q9P2K3 495 aaPredicted RBP21.26■□□□□ 0.99
COL23A1-201ENST00000390654 PRPF19Q9UMS4 504 aaKnown RBP21.26■□□□□ 0.99
COL23A1-201ENST00000390654 ACOT9Q9Y305 439 aa21.26■□□□□ 0.99
COL23A1-201ENST00000390654 MTF2Q9Y483 593 aaPredicted RBP21.26■□□□□ 0.99
COL23A1-201ENST00000390654 SNX13Q9Y5W8 968 aa21.26■□□□□ 0.99
COL23A1-201ENST00000390654 TCAF2A6NFQ2 919 aa21.25■□□□□ 0.99
COL23A1-201ENST00000390654 E7ENX8 843 aa21.25■□□□□ 0.99
COL23A1-201ENST00000390654 CHRNA4P43681 627 aa21.25■□□□□ 0.99
COL23A1-201ENST00000390654 USP46P62068 366 aa21.25■□□□□ 0.99
COL23A1-201ENST00000390654 KCTD11Q693B1 232 aa21.25■□□□□ 0.99
COL23A1-201ENST00000390654 CNSTQ6PJW8 725 aa21.25■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms