RNA–Protein interactions for RNA: ENST00000390627.3

IGHV3-53-201, Transcript of immunoglobulin heavy variable 3-53, humanhuman

APPRIS P1 BASIC

Gene IGHV3-53, Length 571 nt, Biotype IG V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-53-201ENST00000390627 FAM124AQ86V42 546 aa15.29■□□□□ 0.04
IGHV3-53-201ENST00000390627 TMEFF1Q8IYR6 380 aa15.29■□□□□ 0.04
IGHV3-53-201ENST00000390627 KATNAL2Q8IYT4 538 aa15.29■□□□□ 0.04
IGHV3-53-201ENST00000390627 RYBPQ8N488 228 aaPredicted RBP15.29■□□□□ 0.04
IGHV3-53-201ENST00000390627 HDDC3Q8N4P3 179 aa15.29■□□□□ 0.04
IGHV3-53-201ENST00000390627 RNF10Q8N5U6 811 aaKnown RBP15.29■□□□□ 0.04
IGHV3-53-201ENST00000390627 PQLC3Q8N755 202 aa15.29■□□□□ 0.04
IGHV3-53-201ENST00000390627 NETO2Q8NC67 525 aa15.29■□□□□ 0.04
IGHV3-53-201ENST00000390627 CHST14Q8NCH0 376 aa15.29■□□□□ 0.04
IGHV3-53-201ENST00000390627 TMIEQ8NEW7 156 aa15.29■□□□□ 0.04
IGHV3-53-201ENST00000390627 GRIN3AQ8TCU5 1115 aa15.29■□□□□ 0.04
IGHV3-53-201ENST00000390627 NSMCE1Q8WV22 266 aa15.29■□□□□ 0.04
IGHV3-53-201ENST00000390627 FOXJ1Q92949 421 aa15.29■□□□□ 0.04
IGHV3-53-201ENST00000390627 RNF25Q96BH1 459 aaPredicted RBP15.29■□□□□ 0.04
IGHV3-53-201ENST00000390627 PPP1R16AQ96I34 528 aa15.29■□□□□ 0.04
IGHV3-53-201ENST00000390627 RBM41Q96IZ5 413 aaKnown RBP15.29■□□□□ 0.04
IGHV3-53-201ENST00000390627 LRIG1Q96JA1 1093 aa15.29■□□□□ 0.04
IGHV3-53-201ENST00000390627 ZNF830Q96NB3 372 aaPredicted RBP15.29■□□□□ 0.04
IGHV3-53-201ENST00000390627 ZNF599Q96NL3 588 aa15.29■□□□□ 0.04
IGHV3-53-201ENST00000390627 PCED1AQ9H1Q7 454 aa15.29■□□□□ 0.04
IGHV3-53-201ENST00000390627 DYRK4Q9NR20 520 aa15.29■□□□□ 0.04
IGHV3-53-201ENST00000390627 TRIM10Q9UDY6 481 aa15.29■□□□□ 0.04
IGHV3-53-201ENST00000390627 PCDHGA5Q9Y5G8 931 aa15.29■□□□□ 0.04
IGHV3-53-201ENST00000390627 A0A0U1RQJ8 604 aa15.28■□□□□ 0.04
IGHV3-53-201ENST00000390627 CCDC66A2RUB6 948 aa15.28■□□□□ 0.04
IGHV3-53-201ENST00000390627 KPNA3O00505 521 aaPredicted RBP15.28■□□□□ 0.04
IGHV3-53-201ENST00000390627 SLC7A4O43246 635 aa15.28■□□□□ 0.04
IGHV3-53-201ENST00000390627 ZRANB2O95218 330 aaKnown RBP eCLIP15.28■□□□□ 0.04
IGHV3-53-201ENST00000390627 PTMAP06454 111 aaKnown RBP15.28■□□□□ 0.04
IGHV3-53-201ENST00000390627 CTSLP07711 333 aa15.28■□□□□ 0.04
IGHV3-53-201ENST00000390627 MX2P20592 715 aa15.28■□□□□ 0.04
IGHV3-53-201ENST00000390627 CTNNA1P35221 906 aaKnown RBP15.28■□□□□ 0.04
IGHV3-53-201ENST00000390627 DPP6P42658 865 aa15.28■□□□□ 0.04
IGHV3-53-201ENST00000390627 DHPSP49366 369 aaPredicted RBP15.28■□□□□ 0.04
IGHV3-53-201ENST00000390627 GALNT2Q10471 571 aa15.28■□□□□ 0.04
IGHV3-53-201ENST00000390627 GSE1Q14687 1217 aa15.28■□□□□ 0.04
IGHV3-53-201ENST00000390627 CYTH1Q15438 398 aa15.28■□□□□ 0.04
IGHV3-53-201ENST00000390627 LYSMD4Q5XG99 296 aa15.28■□□□□ 0.04
IGHV3-53-201ENST00000390627 SLC9A4Q6AI14 798 aa15.28■□□□□ 0.04
IGHV3-53-201ENST00000390627 MFSD7Q6UXD7 560 aa15.28■□□□□ 0.04
IGHV3-53-201ENST00000390627 RFX6Q8HWS3 928 aa15.28■□□□□ 0.04
IGHV3-53-201ENST00000390627 TP53INP2Q8IXH6 220 aa15.28■□□□□ 0.04
IGHV3-53-201ENST00000390627 RCOR2Q8IZ40 523 aa15.28■□□□□ 0.04
IGHV3-53-201ENST00000390627 BBS5Q8N3I7 341 aa15.28■□□□□ 0.04
IGHV3-53-201ENST00000390627 AADATQ8N5Z0 425 aa15.28■□□□□ 0.04
IGHV3-53-201ENST00000390627 LRRC57Q8N9N7 239 aa15.28■□□□□ 0.04
IGHV3-53-201ENST00000390627 CADM4Q8NFZ8 388 aa15.28■□□□□ 0.04
IGHV3-53-201ENST00000390627 EXD1Q8NHP7 514 aa15.28■□□□□ 0.04
IGHV3-53-201ENST00000390627 CINPQ9BW66 212 aaPredicted RBP15.28■□□□□ 0.04
IGHV3-53-201ENST00000390627 GPR174Q9BXC1 333 aa15.28■□□□□ 0.04
IGHV3-53-201ENST00000390627 ZDHHC6Q9H6R6 413 aa15.28■□□□□ 0.04
IGHV3-53-201ENST00000390627 LHX3Q9UBR4 397 aa15.28■□□□□ 0.04
IGHV3-53-201ENST00000390627 SEPT3Q9UH03 358 aa15.28■□□□□ 0.04
IGHV3-53-201ENST00000390627 AMFRQ9UKV5 643 aa15.28■□□□□ 0.04
IGHV3-53-201ENST00000390627 SARDHQ9UL12 918 aa15.28■□□□□ 0.04
IGHV3-53-201ENST00000390627 USP34Q70CQ2 3546 aa15.28■□□□□ 0.04
IGHV3-53-201ENST00000390627 ABCA7Q8IZY2 2146 aa15.28■□□□□ 0.04
IGHV3-53-201ENST00000390627 THADAQ6YHU6 1953 aa15.27■□□□□ 0.04
IGHV3-53-201ENST00000390627 DMDP11532 3685 aa15.27■□□□□ 0.04
IGHV3-53-201ENST00000390627 MAFKO60675 156 aa15.27■□□□□ 0.04
IGHV3-53-201ENST00000390627 LEFTY1O75610 366 aa15.27■□□□□ 0.04
IGHV3-53-201ENST00000390627 POP4O95707 220 aaKnown RBP15.27■□□□□ 0.04
IGHV3-53-201ENST00000390627 SEMA4FO95754 770 aa15.27■□□□□ 0.04
IGHV3-53-201ENST00000390627 CTNNA2P26232 953 aa15.27■□□□□ 0.04
IGHV3-53-201ENST00000390627 ACSL1P33121 698 aa15.27■□□□□ 0.04
IGHV3-53-201ENST00000390627 DRD3P35462 400 aa15.27■□□□□ 0.04
IGHV3-53-201ENST00000390627 GARSP41250 739 aaKnown RBP15.27■□□□□ 0.04
IGHV3-53-201ENST00000390627 CREB5Q02930 508 aa15.27■□□□□ 0.04
IGHV3-53-201ENST00000390627 ZNF33AQ06730 810 aa15.27■□□□□ 0.04
IGHV3-53-201ENST00000390627 TFDP2Q14188 446 aa15.27■□□□□ 0.04
IGHV3-53-201ENST00000390627 ZNF235Q14590 738 aa15.27■□□□□ 0.04
IGHV3-53-201ENST00000390627 LBRQ14739 615 aaKnown RBP15.27■□□□□ 0.04
IGHV3-53-201ENST00000390627 GRM3Q14832 879 aa15.27■□□□□ 0.04
IGHV3-53-201ENST00000390627 MYLK3Q32MK0 819 aa15.27■□□□□ 0.04
IGHV3-53-201ENST00000390627 ARSIQ5FYB1 569 aa15.27■□□□□ 0.04
IGHV3-53-201ENST00000390627 TFDP3Q5H9I0 405 aa15.27■□□□□ 0.04
IGHV3-53-201ENST00000390627 SYCP2LQ5T4T6 812 aa15.27■□□□□ 0.04
IGHV3-53-201ENST00000390627 ATXN7L2Q5T6C5 722 aaPredicted RBP15.27■□□□□ 0.04
IGHV3-53-201ENST00000390627 TIGD7Q6NT04 549 aaPredicted RBP15.27■□□□□ 0.04
IGHV3-53-201ENST00000390627 SPOCD1Q6ZMY3 1216 aa15.27■□□□□ 0.04
IGHV3-53-201ENST00000390627 ZNF662Q6ZS27 426 aa15.27■□□□□ 0.04
IGHV3-53-201ENST00000390627 ARMCX6Q7L4S7 300 aa15.27■□□□□ 0.04
IGHV3-53-201ENST00000390627 PEX26Q7Z412 305 aa15.27■□□□□ 0.04
IGHV3-53-201ENST00000390627 CYP2U1Q7Z449 544 aa15.27■□□□□ 0.04
IGHV3-53-201ENST00000390627 CCDC50Q8IVM0 306 aa15.27■□□□□ 0.04
IGHV3-53-201ENST00000390627 OR6K2Q8NGY2 324 aa15.27■□□□□ 0.04
IGHV3-53-201ENST00000390627 KRT35Q92764 455 aa15.27■□□□□ 0.04
IGHV3-53-201ENST00000390627 ZNF419Q96HQ0 510 aaPredicted RBP15.27■□□□□ 0.04
IGHV3-53-201ENST00000390627 HSPA12BQ96MM6 686 aa15.27■□□□□ 0.04
IGHV3-53-201ENST00000390627 OSBPL1AQ9BXW6 950 aa15.27■□□□□ 0.04
IGHV3-53-201ENST00000390627 NEUROG2Q9H2A3 272 aa15.27■□□□□ 0.04
IGHV3-53-201ENST00000390627 SERGEFQ9UGK8 458 aa15.27■□□□□ 0.04
IGHV3-53-201ENST00000390627 GUCA1BQ9UMX6 200 aa15.27■□□□□ 0.04
IGHV3-53-201ENST00000390627 PCDHA3Q9Y5H8 950 aa15.27■□□□□ 0.04
IGHV3-53-201ENST00000390627 WASF2Q9Y6W5 498 aa15.27■□□□□ 0.04
IGHV3-53-201ENST00000390627 LRRC72A6NJI9 287 aa15.26■□□□□ 0.03
IGHV3-53-201ENST00000390627 MEI4A8MW99 385 aa15.26■□□□□ 0.03
IGHV3-53-201ENST00000390627 KRIT1O00522 736 aa15.26■□□□□ 0.03
IGHV3-53-201ENST00000390627 LRP3O75074 770 aa15.26■□□□□ 0.03
IGHV3-53-201ENST00000390627 HSPA9P38646 679 aaKnown RBP15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms