RNA–Protein interactions for RNA: ENST00000390467.3

TRAV40-201, Transcript of T cell receptor alpha variable 40, humanhuman

APPRIS P1 BASIC

Gene TRAV40, Length 317 nt, Biotype TR V gene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40-201ENST00000390467 TMEM247A6NEH6 219 aa3.55□□□□□ -1.84
TRAV40-201ENST00000390467 HMX3A6NHT5 357 aa3.55□□□□□ -1.84
TRAV40-201ENST00000390467 CCNT1O60563 726 aaKnown RBP3.55□□□□□ -1.84
TRAV40-201ENST00000390467 CAMTA2O94983 1202 aa3.55□□□□□ -1.84
TRAV40-201ENST00000390467 PLGP00747 810 aaPredicted RBP3.55□□□□□ -1.84
TRAV40-201ENST00000390467 CSTBP04080 98 aaKnown RBP3.55□□□□□ -1.84
TRAV40-201ENST00000390467 ENO3P13929 434 aaPredicted RBP3.55□□□□□ -1.84
TRAV40-201ENST00000390467 DCTDP32321 178 aa3.55□□□□□ -1.84
TRAV40-201ENST00000390467 RFC1P35251 1148 aaPredicted RBP3.55□□□□□ -1.84
TRAV40-201ENST00000390467 PTPN9P43378 593 aa3.55□□□□□ -1.84
TRAV40-201ENST00000390467 HTR3AP46098 478 aa3.55□□□□□ -1.84
TRAV40-201ENST00000390467 MTNR1AP48039 350 aa3.55□□□□□ -1.84
TRAV40-201ENST00000390467 RPS6KA3P51812 740 aa3.55□□□□□ -1.84
TRAV40-201ENST00000390467 MVDP53602 400 aa3.55□□□□□ -1.84
TRAV40-201ENST00000390467 HLFQ16534 295 aa3.55□□□□□ -1.84
TRAV40-201ENST00000390467 AP5B1Q2VPB7 878 aa3.55□□□□□ -1.84
TRAV40-201ENST00000390467 AADACL2Q6P093 401 aa3.55□□□□□ -1.84
TRAV40-201ENST00000390467 SPSB3Q6PJ21 355 aa3.55□□□□□ -1.84
TRAV40-201ENST00000390467 H1FNTQ75WM6 255 aaPredicted RBP3.55□□□□□ -1.84
TRAV40-201ENST00000390467 MON1BQ7L1V2 547 aa3.55□□□□□ -1.84
TRAV40-201ENST00000390467 PALB2Q86YC2 1186 aa3.55□□□□□ -1.84
TRAV40-201ENST00000390467 CSGALNACT1Q8TDX6 532 aa3.55□□□□□ -1.84
TRAV40-201ENST00000390467 RTP4Q96DX8 246 aa3.55□□□□□ -1.84
TRAV40-201ENST00000390467 TEFMQ96QE5 360 aaKnown RBP3.55□□□□□ -1.84
TRAV40-201ENST00000390467 GFM1Q96RP9 751 aaKnown RBP3.55□□□□□ -1.84
TRAV40-201ENST00000390467 MSTO1Q9BUK6 570 aa3.55□□□□□ -1.84
TRAV40-201ENST00000390467 NPFFR1Q9GZQ6 430 aa3.55□□□□□ -1.84
TRAV40-201ENST00000390467 DDX31Q9H8H2 851 aaKnown RBP3.55□□□□□ -1.84
TRAV40-201ENST00000390467 G6PC2Q9NQR9 355 aa3.55□□□□□ -1.84
TRAV40-201ENST00000390467 NLKQ9UBE8 527 aa3.55□□□□□ -1.84
TRAV40-201ENST00000390467 IL36RNQ9UBH0 155 aa3.55□□□□□ -1.84
TRAV40-201ENST00000390467 KDM4EB2RXH2 506 aaPredicted RBP3.54□□□□□ -1.84
TRAV40-201ENST00000390467 SLC16A5O15375 505 aa3.54□□□□□ -1.84
TRAV40-201ENST00000390467 GRID2O43424 1007 aa3.54□□□□□ -1.84
TRAV40-201ENST00000390467 KRT38O76015 456 aa3.54□□□□□ -1.84
TRAV40-201ENST00000390467 CKMT1AP12532 417 aa3.54□□□□□ -1.84
TRAV40-201ENST00000390467 VEGFAP15692 232 aaPredicted RBP3.54□□□□□ -1.84
TRAV40-201ENST00000390467 CD72P21854 359 aa3.54□□□□□ -1.84
TRAV40-201ENST00000390467 C21orf33P30042 268 aaPredicted RBP3.54□□□□□ -1.84
TRAV40-201ENST00000390467 MXI1P50539 228 aa3.54□□□□□ -1.84
TRAV40-201ENST00000390467 SMAD1Q15797 465 aaKnown RBP3.54□□□□□ -1.84
TRAV40-201ENST00000390467 KRTAP24-1Q3LI83 254 aa3.54□□□□□ -1.84
TRAV40-201ENST00000390467 ZNF718Q3SXZ3 478 aa3.54□□□□□ -1.84
TRAV40-201ENST00000390467 ZNF484Q5JVG2 852 aa3.54□□□□□ -1.84
TRAV40-201ENST00000390467 GFI1BQ5VTD9 330 aa3.54□□□□□ -1.84
TRAV40-201ENST00000390467 TMEM268Q5VZI3 342 aa3.54□□□□□ -1.84
TRAV40-201ENST00000390467 ZBTB8BQ8NAP8 495 aaPredicted RBP3.54□□□□□ -1.84
TRAV40-201ENST00000390467 LILRB1Q8NHL6 650 aaPredicted RBP3.54□□□□□ -1.84
TRAV40-201ENST00000390467 NR4A3Q92570 626 aa3.54□□□□□ -1.84
TRAV40-201ENST00000390467 ATOH1Q92858 354 aaPredicted RBP3.54□□□□□ -1.84
TRAV40-201ENST00000390467 KTI12Q96EK9 354 aaPredicted RBP3.54□□□□□ -1.84
TRAV40-201ENST00000390467 CLK4Q9HAZ1 481 aaKnown RBP3.54□□□□□ -1.84
TRAV40-201ENST00000390467 TMLHEQ9NVH6 421 aa3.54□□□□□ -1.84
TRAV40-201ENST00000390467 GRHL1Q9NZI5 618 aa3.54□□□□□ -1.84
TRAV40-201ENST00000390467 SRP68Q9UHB9 627 aaKnown RBP3.54□□□□□ -1.84
TRAV40-201ENST00000390467 AGO1Q9UL18 857 aaKnown RBP3.54□□□□□ -1.84
TRAV40-201ENST00000390467 WDR81Q562E7 1941 aa3.54□□□□□ -1.84
TRAV40-201ENST00000390467 E7EVH7 732 aa3.53□□□□□ -1.84
TRAV40-201ENST00000390467 EYA2O00167 538 aa3.53□□□□□ -1.84
TRAV40-201ENST00000390467 IPO5O00410 1097 aaKnown RBP3.53□□□□□ -1.84
TRAV40-201ENST00000390467 TIMM23O14925 209 aa3.53□□□□□ -1.84
TRAV40-201ENST00000390467 ITM2AO43736 263 aa3.53□□□□□ -1.84
TRAV40-201ENST00000390467 LDB3O75112 727 aa3.53□□□□□ -1.84
TRAV40-201ENST00000390467 CBX6O95503 412 aa3.53□□□□□ -1.84
TRAV40-201ENST00000390467 MMP3P08254 477 aa3.53□□□□□ -1.84
TRAV40-201ENST00000390467 PNPLA4P41247 253 aa3.53□□□□□ -1.84
TRAV40-201ENST00000390467 DLX5P56178 289 aa3.53□□□□□ -1.84
TRAV40-201ENST00000390467 TUBA1BP68363 451 aa3.53□□□□□ -1.84
TRAV40-201ENST00000390467 THOC5Q13769 683 aaKnown RBP3.53□□□□□ -1.84
TRAV40-201ENST00000390467 BYSLQ13895 437 aaKnown RBP3.53□□□□□ -1.84
TRAV40-201ENST00000390467 IL13RA2Q14627 380 aa3.53□□□□□ -1.84
TRAV40-201ENST00000390467 TIGD6Q17RP2 521 aa3.53□□□□□ -1.84
TRAV40-201ENST00000390467 TUBB8Q3ZCM7 444 aa3.53□□□□□ -1.84
TRAV40-201ENST00000390467 RUNDC3AQ59EK9 446 aa3.53□□□□□ -1.84
TRAV40-201ENST00000390467 JMJD6Q6NYC1 403 aaPredicted RBP3.53□□□□□ -1.84
TRAV40-201ENST00000390467 RBFAQ8N0V3 343 aa3.53□□□□□ -1.84
TRAV40-201ENST00000390467 FSIP1Q8NA03 581 aa3.53□□□□□ -1.84
TRAV40-201ENST00000390467 LINS1Q8NG48 757 aa3.53□□□□□ -1.84
TRAV40-201ENST00000390467 OR4N2Q8NGD1 307 aa3.53□□□□□ -1.84
TRAV40-201ENST00000390467 POF1BQ8WVV4 589 aa3.53□□□□□ -1.84
TRAV40-201ENST00000390467 TXNDC15Q96J42 360 aa3.53□□□□□ -1.84
TRAV40-201ENST00000390467 PKP4Q99569 1192 aa3.53□□□□□ -1.84
TRAV40-201ENST00000390467 SLC25A33Q9BSK2 321 aa3.53□□□□□ -1.84
TRAV40-201ENST00000390467 TAF1DQ9H5J8 278 aaPredicted RBP3.53□□□□□ -1.84
TRAV40-201ENST00000390467 RETREG1Q9H6L5 497 aa3.53□□□□□ -1.84
TRAV40-201ENST00000390467 GAREM1Q9H706 876 aa3.53□□□□□ -1.84
TRAV40-201ENST00000390467 WDR6Q9NNW5 1121 aaKnown RBP3.53□□□□□ -1.84
TRAV40-201ENST00000390467 DYTNA2CJ06 578 aa3.52□□□□□ -1.85
TRAV40-201ENST00000390467 DENND3A2RUS2 1198 aa3.52□□□□□ -1.85
TRAV40-201ENST00000390467 OR6C68A6NDL8 312 aa3.52□□□□□ -1.85
TRAV40-201ENST00000390467 STRNO43815 780 aa3.52□□□□□ -1.85
TRAV40-201ENST00000390467 PLIN1O60240 522 aa3.52□□□□□ -1.85
TRAV40-201ENST00000390467 METTL18O95568 372 aa3.52□□□□□ -1.85
TRAV40-201ENST00000390467 AFPP02771 609 aaKnown RBP3.52□□□□□ -1.85
TRAV40-201ENST00000390467 CST5P28325 142 aaPredicted RBP3.52□□□□□ -1.85
TRAV40-201ENST00000390467 GJC1P36383 396 aa3.52□□□□□ -1.85
TRAV40-201ENST00000390467 SKIV2L2P42285 1042 aaKnown RBP3.52□□□□□ -1.85
TRAV40-201ENST00000390467 FOXO1Q12778 655 aa3.52□□□□□ -1.85
TRAV40-201ENST00000390467 ILF3Q12906 894 aaKnown RBP eCLIP3.52□□□□□ -1.85
TRAV40-201ENST00000390467 TRAF2Q12933 501 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms