RNA–Protein interactions for RNA: ENST00000381990.6

GPNMB-202, Transcript of glycoprotein nmb, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GPNMB, Length 2,763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-202ENST00000381990 TMEM114B3SHH9 223 aa9.08□□□□□ -0.96
GPNMB-202ENST00000381990 TPP1O14773 563 aa9.08□□□□□ -0.96
GPNMB-202ENST00000381990 KRT34O76011 436 aa9.08□□□□□ -0.96
GPNMB-202ENST00000381990 SORBS2O94875 1100 aaKnown RBP9.08□□□□□ -0.96
GPNMB-202ENST00000381990 CDH2P19022 906 aaPredicted RBP9.08□□□□□ -0.96
GPNMB-202ENST00000381990 NOS2P35228 1153 aa9.08□□□□□ -0.96
GPNMB-202ENST00000381990 APLP1P51693 650 aa9.08□□□□□ -0.96
GPNMB-202ENST00000381990 MAP3K7CLP57077 242 aa9.08□□□□□ -0.96
GPNMB-202ENST00000381990 SEMA5AQ13591 1074 aa9.08□□□□□ -0.96
GPNMB-202ENST00000381990 FLOT2Q14254 428 aa9.08□□□□□ -0.96
GPNMB-202ENST00000381990 CA9Q16790 459 aa9.08□□□□□ -0.96
GPNMB-202ENST00000381990 MYLK3Q32MK0 819 aa9.08□□□□□ -0.96
GPNMB-202ENST00000381990 TRAF7Q6Q0C0 670 aa9.08□□□□□ -0.96
GPNMB-202ENST00000381990 ERI1Q8IV48 349 aaKnown RBP9.08□□□□□ -0.96
GPNMB-202ENST00000381990 C10orf107Q8IVU9 208 aa9.08□□□□□ -0.96
GPNMB-202ENST00000381990 KYQ8NBH2 561 aa9.08□□□□□ -0.96
GPNMB-202ENST00000381990 PCDH19Q8TAB3 1148 aa9.08□□□□□ -0.96
GPNMB-202ENST00000381990 RGS18Q9NS28 235 aa9.08□□□□□ -0.96
GPNMB-202ENST00000381990 PNPOQ9NVS9 261 aa9.08□□□□□ -0.96
GPNMB-202ENST00000381990 SH3BP1Q9Y3L3 701 aa9.08□□□□□ -0.96
GPNMB-202ENST00000381990 ARHGEF37A1IGU5 675 aa9.08□□□□□ -0.96
GPNMB-202ENST00000381990 RGSL1A5PLK6 1076 aa9.08□□□□□ -0.96
GPNMB-202ENST00000381990 M0QZQ0 153 aa9.08□□□□□ -0.96
GPNMB-202ENST00000381990 STK10O94804 968 aaKnown RBP9.08□□□□□ -0.96
GPNMB-202ENST00000381990 EOMESO95936 686 aa9.08□□□□□ -0.96
GPNMB-202ENST00000381990 ZFXP17010 805 aaPredicted RBP9.08□□□□□ -0.96
GPNMB-202ENST00000381990 GARSP41250 739 aaKnown RBP9.08□□□□□ -0.96
GPNMB-202ENST00000381990 NR2C2P49116 596 aa9.08□□□□□ -0.96
GPNMB-202ENST00000381990 TKTL1P51854 596 aa9.08□□□□□ -0.96
GPNMB-202ENST00000381990 MYBPC1Q00872 1141 aa9.08□□□□□ -0.96
GPNMB-202ENST00000381990 PPP6R3Q5H9R7 873 aaPredicted RBP9.08□□□□□ -0.96
GPNMB-202ENST00000381990 DCLRE1AQ6PJP8 1040 aa9.08□□□□□ -0.96
GPNMB-202ENST00000381990 CD300LGQ6UXG3 332 aa9.08□□□□□ -0.96
GPNMB-202ENST00000381990 PACS1Q6VY07 963 aa9.08□□□□□ -0.96
GPNMB-202ENST00000381990 BNC2Q6ZN30 1099 aaPredicted RBP9.08□□□□□ -0.96
GPNMB-202ENST00000381990 PHTF2Q8N3S3 785 aa9.08□□□□□ -0.96
GPNMB-202ENST00000381990 PQLC3Q8N755 202 aa9.08□□□□□ -0.96
GPNMB-202ENST00000381990 RP9Q8TA86 221 aaKnown RBP9.08□□□□□ -0.96
GPNMB-202ENST00000381990 NT5C3BQ969T7 300 aa9.08□□□□□ -0.96
GPNMB-202ENST00000381990 DNAJC1Q96KC8 554 aaKnown RBP9.08□□□□□ -0.96
GPNMB-202ENST00000381990 BIRC8Q96P09 236 aa9.08□□□□□ -0.96
GPNMB-202ENST00000381990 PRPF18Q99633 342 aaKnown RBP9.08□□□□□ -0.96
GPNMB-202ENST00000381990 SMOQ99835 787 aa9.08□□□□□ -0.96
GPNMB-202ENST00000381990 ACBD6Q9BR61 282 aa9.08□□□□□ -0.96
GPNMB-202ENST00000381990 CDH19Q9H159 772 aa9.08□□□□□ -0.96
GPNMB-202ENST00000381990 DHX35Q9H5Z1 703 aaKnown RBP9.08□□□□□ -0.96
GPNMB-202ENST00000381990 COG4Q9H9E3 785 aa9.08□□□□□ -0.96
GPNMB-202ENST00000381990 STARD7Q9NQZ5 370 aa9.08□□□□□ -0.96
GPNMB-202ENST00000381990 STAP1Q9ULZ2 295 aa9.08□□□□□ -0.96
GPNMB-202ENST00000381990 AP4E1Q9UPM8 1137 aa9.08□□□□□ -0.96
GPNMB-202ENST00000381990 HEY1Q9Y5J3 304 aa9.08□□□□□ -0.96
GPNMB-202ENST00000381990 TSC2P49815 1807 aa9.08□□□□□ -0.96
GPNMB-202ENST00000381990 FRMPD3Q5JV73 1810 aa9.07□□□□□ -0.96
GPNMB-202ENST00000381990 C9IYK1 514 aa9.07□□□□□ -0.96
GPNMB-202ENST00000381990 COQ9O75208 318 aa9.07□□□□□ -0.96
GPNMB-202ENST00000381990 TOP3BO95985 862 aaKnown RBP9.07□□□□□ -0.96
GPNMB-202ENST00000381990 ATP6V1B1P15313 513 aa9.07□□□□□ -0.96
GPNMB-202ENST00000381990 NDUFV1P49821 464 aa9.07□□□□□ -0.96
GPNMB-202ENST00000381990 SULT1E1P49888 294 aa9.07□□□□□ -0.96
GPNMB-202ENST00000381990 ATXN1P54253 815 aaKnown RBP9.07□□□□□ -0.96
GPNMB-202ENST00000381990 PRMT2P55345 433 aa9.07□□□□□ -0.96
GPNMB-202ENST00000381990 MBTPS1Q14703 1052 aa9.07□□□□□ -0.96
GPNMB-202ENST00000381990 DCAF6Q58WW2 860 aa9.07□□□□□ -0.96
GPNMB-202ENST00000381990 PIGGQ5H8A4 983 aa9.07□□□□□ -0.96
GPNMB-202ENST00000381990 C16orf46Q6P387 395 aa9.07□□□□□ -0.96
GPNMB-202ENST00000381990 GLB1LQ6UWU2 654 aa9.07□□□□□ -0.96
GPNMB-202ENST00000381990 SLC24A5Q71RS6 500 aa9.07□□□□□ -0.96
GPNMB-202ENST00000381990 PSTKQ8IV42 348 aaKnown RBP9.07□□□□□ -0.96
GPNMB-202ENST00000381990 RSPH1Q8WYR4 309 aa9.07□□□□□ -0.96
GPNMB-202ENST00000381990 NDRG1Q92597 394 aaKnown RBP9.07□□□□□ -0.96
GPNMB-202ENST00000381990 SMARCD1Q96GM5 515 aa9.07□□□□□ -0.96
GPNMB-202ENST00000381990 CNBD2Q96M20 576 aa9.07□□□□□ -0.96
GPNMB-202ENST00000381990 SLC2A13Q96QE2 648 aa9.07□□□□□ -0.96
GPNMB-202ENST00000381990 NPY6RQ99463 290 aa9.07□□□□□ -0.96
GPNMB-202ENST00000381990 RTP3Q9BQQ7 232 aa9.07□□□□□ -0.96
GPNMB-202ENST00000381990 CNGB3Q9NQW8 809 aa9.07□□□□□ -0.96
GPNMB-202ENST00000381990 DDX18Q9NVP1 670 aaKnown RBP9.07□□□□□ -0.96
GPNMB-202ENST00000381990 RSL24D1Q9UHA3 163 aaKnown RBP9.07□□□□□ -0.96
GPNMB-202ENST00000381990 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.07□□□□□ -0.96
GPNMB-202ENST00000381990 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.07□□□□□ -0.96
GPNMB-202ENST00000381990 ARVCFO00192 962 aa9.07□□□□□ -0.96
GPNMB-202ENST00000381990 ZBTB14O43829 449 aa9.07□□□□□ -0.96
GPNMB-202ENST00000381990 FKTNO75072 461 aa9.07□□□□□ -0.96
GPNMB-202ENST00000381990 ZNF23P17027 643 aa9.07□□□□□ -0.96
GPNMB-202ENST00000381990 GLDCP23378 1020 aa9.07□□□□□ -0.96
GPNMB-202ENST00000381990 CYP2F1P24903 491 aa9.07□□□□□ -0.96
GPNMB-202ENST00000381990 GRK4P32298 578 aa9.07□□□□□ -0.96
GPNMB-202ENST00000381990 BRCC3P46736 316 aa9.07□□□□□ -0.96
GPNMB-202ENST00000381990 NUDT2P50583 147 aa9.07□□□□□ -0.96
GPNMB-202ENST00000381990 SCNN1BP51168 640 aa9.07□□□□□ -0.96
GPNMB-202ENST00000381990 EMP3P54852 163 aa9.07□□□□□ -0.96
GPNMB-202ENST00000381990 DAOAP59103 153 aa9.07□□□□□ -0.96
GPNMB-202ENST00000381990 RAB15P59190 212 aa9.07□□□□□ -0.96
GPNMB-202ENST00000381990 PAN2Q504Q3 1202 aaKnown RBP9.07□□□□□ -0.96
GPNMB-202ENST00000381990 INTS6LQ5JSJ4 861 aaKnown RBP9.07□□□□□ -0.96
GPNMB-202ENST00000381990 RAB41Q5JT25 222 aa9.07□□□□□ -0.96
GPNMB-202ENST00000381990 FAM171BQ6P995 826 aa9.07□□□□□ -0.96
GPNMB-202ENST00000381990 BNIPLQ7Z465 357 aa9.07□□□□□ -0.96
GPNMB-202ENST00000381990 ZNF554Q86TJ5 538 aa9.07□□□□□ -0.96
GPNMB-202ENST00000381990 RTN4RL1Q86UN2 441 aaPredicted RBP9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms