RNA–Protein interactions for RNA: ENST00000381431.9

SGCB-201, Transcript of sarcoglycan beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCB, Length 4,431 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCB-201ENST00000381431 MFSD3Q96ES6 412 aa17.35■□□□□ 0.37
SGCB-201ENST00000381431 YME1L1Q96TA2 773 aa17.35■□□□□ 0.37
SGCB-201ENST00000381431 SMAD5Q99717 465 aaKnown RBP17.35■□□□□ 0.37
SGCB-201ENST00000381431 NIFKQ9BYG3 293 aaKnown RBP17.35■□□□□ 0.37
SGCB-201ENST00000381431 PAIP1Q9H074 479 aaKnown RBP17.35■□□□□ 0.37
SGCB-201ENST00000381431 VPS45Q9NRW7 570 aa17.35■□□□□ 0.37
SGCB-201ENST00000381431 MAFBQ9Y5Q3 323 aaPredicted RBP17.35■□□□□ 0.37
SGCB-201ENST00000381431 IFT172Q9UG01 1749 aa17.35■□□□□ 0.37
SGCB-201ENST00000381431 BIRC5O15392 142 aa17.35■□□□□ 0.37
SGCB-201ENST00000381431 FGF10O15520 208 aaPredicted RBP17.35■□□□□ 0.37
SGCB-201ENST00000381431 SERPINB1P30740 379 aa17.35■□□□□ 0.37
SGCB-201ENST00000381431 RFX3P48380 749 aa17.35■□□□□ 0.37
SGCB-201ENST00000381431 HADHBP55084 474 aaKnown RBP17.35■□□□□ 0.37
SGCB-201ENST00000381431 TXNRD3NBQ6F5E7 133 aa17.35■□□□□ 0.37
SGCB-201ENST00000381431 BBS7Q8IWZ6 715 aa17.35■□□□□ 0.37
SGCB-201ENST00000381431 TBC1D19Q8N5T2 526 aa17.35■□□□□ 0.37
SGCB-201ENST00000381431 BPIFA1Q9NP55 256 aa17.35■□□□□ 0.37
SGCB-201ENST00000381431 KLQ9UEF7 1012 aa17.35■□□□□ 0.37
SGCB-201ENST00000381431 MYO9BQ13459 2157 aa17.34■□□□□ 0.37
SGCB-201ENST00000381431 MSI1O43347 362 aaKnown RBP17.34■□□□□ 0.37
SGCB-201ENST00000381431 KRT8P05787 483 aa17.34■□□□□ 0.37
SGCB-201ENST00000381431 PSMB9P28065 219 aa17.34■□□□□ 0.37
SGCB-201ENST00000381431 CYP2C18P33260 490 aa17.34■□□□□ 0.37
SGCB-201ENST00000381431 HOXD13P35453 343 aa17.34■□□□□ 0.37
SGCB-201ENST00000381431 PTP4A2Q12974 167 aa17.34■□□□□ 0.37
SGCB-201ENST00000381431 C16orf72Q14CZ0 275 aa17.34■□□□□ 0.37
SGCB-201ENST00000381431 VWA5B1Q5TIE3 1220 aa17.34■□□□□ 0.37
SGCB-201ENST00000381431 STRADAQ7RTN6 431 aa17.34■□□□□ 0.37
SGCB-201ENST00000381431 SYTL1Q8IYJ3 562 aa17.34■□□□□ 0.37
SGCB-201ENST00000381431 TMCO5AQ8N6Q1 288 aa17.34■□□□□ 0.37
SGCB-201ENST00000381431 ADAM28Q9UKQ2 775 aa17.34■□□□□ 0.37
SGCB-201ENST00000381431 MTA2O94776 668 aa17.34■□□□□ 0.37
SGCB-201ENST00000381431 RPLP2P05387 115 aaKnown RBP17.34■□□□□ 0.37
SGCB-201ENST00000381431 SNRPB2P08579 225 aaKnown RBP17.34■□□□□ 0.37
SGCB-201ENST00000381431 TCF4P15884 667 aa17.34■□□□□ 0.37
SGCB-201ENST00000381431 ATXN1P54253 815 aaKnown RBP17.34■□□□□ 0.37
SGCB-201ENST00000381431 SLC44A4Q53GD3 710 aa17.34■□□□□ 0.37
SGCB-201ENST00000381431 ADGRD1Q6QNK2 874 aa17.34■□□□□ 0.37
SGCB-201ENST00000381431 MAGEE2Q8TD90 523 aaPredicted RBP17.34■□□□□ 0.37
SGCB-201ENST00000381431 UTP15Q8TED0 518 aaKnown RBP17.34■□□□□ 0.37
SGCB-201ENST00000381431 OSCP1Q8WVF1 389 aa17.34■□□□□ 0.37
SGCB-201ENST00000381431 MED8Q96G25 268 aa17.34■□□□□ 0.37
SGCB-201ENST00000381431 UXTQ9UBK9 157 aaPredicted RBP17.34■□□□□ 0.37
SGCB-201ENST00000381431 ZNF214Q9UL59 606 aaPredicted RBP17.34■□□□□ 0.37
SGCB-201ENST00000381431 PAIP2BQ9ULR5 123 aaKnown RBP17.34■□□□□ 0.37
SGCB-201ENST00000381431 A0A087X1B8 175 aa17.34■□□□□ 0.37
SGCB-201ENST00000381431 HGFP14210 728 aa17.34■□□□□ 0.37
SGCB-201ENST00000381431 ATP6V1C1P21283 382 aa17.34■□□□□ 0.37
SGCB-201ENST00000381431 MAPK1P28482 360 aa17.34■□□□□ 0.37
SGCB-201ENST00000381431 FOXN2P32314 431 aa17.34■□□□□ 0.37
SGCB-201ENST00000381431 ABL2P42684 1182 aa17.34■□□□□ 0.37
SGCB-201ENST00000381431 LACTB2Q53H82 288 aaPredicted RBP17.34■□□□□ 0.37
SGCB-201ENST00000381431 SWT1Q5T5J6 900 aaKnown RBP17.34■□□□□ 0.37
SGCB-201ENST00000381431 OTOP3Q7RTS5 596 aa17.34■□□□□ 0.37
SGCB-201ENST00000381431 DENND2DQ9H6A0 471 aaPredicted RBP17.34■□□□□ 0.37
SGCB-201ENST00000381431 NMRK1Q9NWW6 199 aa17.34■□□□□ 0.37
SGCB-201ENST00000381431 CABYRO75952 493 aa17.33■□□□□ 0.37
SGCB-201ENST00000381431 MPSTP25325 297 aa17.33■□□□□ 0.37
SGCB-201ENST00000381431 ATP5C1P36542 298 aaKnown RBP17.33■□□□□ 0.37
SGCB-201ENST00000381431 HSPA14Q0VDF9 509 aa17.33■□□□□ 0.37
SGCB-201ENST00000381431 CAMK2GQ13555 558 aaPredicted RBP17.33■□□□□ 0.37
SGCB-201ENST00000381431 TRMT10BQ6PF06 316 aaKnown RBP17.33■□□□□ 0.37
SGCB-201ENST00000381431 CDYL2Q8N8U2 506 aa17.33■□□□□ 0.37
SGCB-201ENST00000381431 FBXO30Q8TB52 745 aa17.33■□□□□ 0.37
SGCB-201ENST00000381431 MTFMTQ96DP5 389 aaKnown RBP17.33■□□□□ 0.37
SGCB-201ENST00000381431 CYLDQ9NQC7 956 aa17.33■□□□□ 0.37
SGCB-201ENST00000381431 FAM105AQ9NUU6 356 aa17.33■□□□□ 0.37
SGCB-201ENST00000381431 H2AFY2Q9P0M6 372 aaPredicted RBP17.33■□□□□ 0.37
SGCB-201ENST00000381431 IPPQ9Y573 584 aa17.33■□□□□ 0.37
SGCB-201ENST00000381431 GRIN2DO15399 1336 aa17.33■□□□□ 0.37
SGCB-201ENST00000381431 C1orf232A0A0U1RR37 186 aa17.33■□□□□ 0.37
SGCB-201ENST00000381431 HS6ST1O60243 411 aa17.33■□□□□ 0.37
SGCB-201ENST00000381431 NELFEP18615 380 aaKnown RBP17.33■□□□□ 0.37
SGCB-201ENST00000381431 NEK3P51956 506 aa17.33■□□□□ 0.37
SGCB-201ENST00000381431 ARHGAP15Q53QZ3 475 aa17.33■□□□□ 0.37
SGCB-201ENST00000381431 LIPMQ5VYY2 423 aa17.33■□□□□ 0.37
SGCB-201ENST00000381431 TPGS1Q6ZTW0 290 aa17.33■□□□□ 0.37
SGCB-201ENST00000381431 ZNF572Q7Z3I7 529 aaPredicted RBP17.33■□□□□ 0.37
SGCB-201ENST00000381431 ZNF467Q7Z7K2 595 aaPredicted RBP17.33■□□□□ 0.37
SGCB-201ENST00000381431 PCDHGC3Q9UN70 934 aa17.33■□□□□ 0.37
SGCB-201ENST00000381431 MYH10P35580 1976 aa17.33■□□□□ 0.36
SGCB-201ENST00000381431 FFAR3O14843 346 aa17.33■□□□□ 0.36
SGCB-201ENST00000381431 GPR42O15529 346 aa17.33■□□□□ 0.36
SGCB-201ENST00000381431 TMEM63AO94886 807 aa17.33■□□□□ 0.36
SGCB-201ENST00000381431 VNN1O95497 513 aa17.33■□□□□ 0.36
SGCB-201ENST00000381431 SLC16A1P53985 500 aa17.33■□□□□ 0.36
SGCB-201ENST00000381431 WDR4P57081 412 aaKnown RBP17.33■□□□□ 0.36
SGCB-201ENST00000381431 SPATA16Q9BXB7 569 aa17.33■□□□□ 0.36
SGCB-201ENST00000381431 PDZD7Q9H5P4 517 aa17.33■□□□□ 0.36
SGCB-201ENST00000381431 RRAGCQ9HB90 399 aa17.33■□□□□ 0.36
SGCB-201ENST00000381431 HBS1LQ9Y450 684 aaKnown RBP17.33■□□□□ 0.36
SGCB-201ENST00000381431 KLRG2A4D1S0 409 aaPredicted RBP17.33■□□□□ 0.36
SGCB-201ENST00000381431 DARSP14868 501 aaKnown RBP17.33■□□□□ 0.36
SGCB-201ENST00000381431 PIK3R1P27986 724 aa17.33■□□□□ 0.36
SGCB-201ENST00000381431 CHI3L1P36222 383 aaPredicted RBP17.33■□□□□ 0.36
SGCB-201ENST00000381431 SLC10A6Q3KNW5 377 aa17.33■□□□□ 0.36
SGCB-201ENST00000381431 ZIK1Q3SY52 487 aaPredicted RBP17.33■□□□□ 0.36
SGCB-201ENST00000381431 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.33■□□□□ 0.36
SGCB-201ENST00000381431 CACUL1Q86Y37 369 aa17.33■□□□□ 0.36
SGCB-201ENST00000381431 ITFG1Q8TB96 612 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms