RNA–Protein interactions for RNA: ENST00000381150.5

SDC1-202, Transcript of syndecan 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SDC1, Length 3,291 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-202ENST00000381150 IKBKEQ14164 716 aa14.05□□□□□ -0.16
SDC1-202ENST00000381150 FAM47CQ5HY64 1035 aa14.05□□□□□ -0.16
SDC1-202ENST00000381150 SETD3Q86TU7 594 aaPredicted RBP14.05□□□□□ -0.16
SDC1-202ENST00000381150 CENPSQ8N2Z9 138 aa14.05□□□□□ -0.16
SDC1-202ENST00000381150 C12orf29Q8N999 325 aa14.05□□□□□ -0.16
SDC1-202ENST00000381150 FAM110BQ8TC76 370 aa14.05□□□□□ -0.16
SDC1-202ENST00000381150 AFG1LQ8WV93 481 aa14.05□□□□□ -0.16
SDC1-202ENST00000381150 CYP4F12Q9HCS2 524 aa14.05□□□□□ -0.16
SDC1-202ENST00000381150 TRPC7Q9HCX4 862 aa14.05□□□□□ -0.16
SDC1-202ENST00000381150 WARS2Q9UGM6 360 aaKnown RBP14.05□□□□□ -0.16
SDC1-202ENST00000381150 EGFL7Q9UHF1 273 aa14.05□□□□□ -0.16
SDC1-202ENST00000381150 CDYLQ9Y232 598 aa14.05□□□□□ -0.16
SDC1-202ENST00000381150 CITO14578 2027 aa14.05□□□□□ -0.16
SDC1-202ENST00000381150 FUOMA2VDF0 154 aa14.05□□□□□ -0.16
SDC1-202ENST00000381150 ZBBXA8MT70 800 aa14.05□□□□□ -0.16
SDC1-202ENST00000381150 KPNA7A9QM74 516 aa14.05□□□□□ -0.16
SDC1-202ENST00000381150 KCNK1O00180 336 aa14.05□□□□□ -0.16
SDC1-202ENST00000381150 CBFA2T3O75081 653 aa14.05□□□□□ -0.16
SDC1-202ENST00000381150 GNL1P36915 607 aaPredicted RBP14.05□□□□□ -0.16
SDC1-202ENST00000381150 GRIA4P48058 902 aa14.05□□□□□ -0.16
SDC1-202ENST00000381150 TNFAIP2Q03169 654 aa14.05□□□□□ -0.16
SDC1-202ENST00000381150 CYP4V2Q6ZWL3 525 aaPredicted RBP14.05□□□□□ -0.16
SDC1-202ENST00000381150 SNX29P2Q8IUI4 249 aa14.05□□□□□ -0.16
SDC1-202ENST00000381150 LPGAT1Q92604 370 aa14.05□□□□□ -0.16
SDC1-202ENST00000381150 CXCL16Q9H2A7 254 aa14.05□□□□□ -0.16
SDC1-202ENST00000381150 CYP3A43Q9HB55 503 aa14.05□□□□□ -0.16
SDC1-202ENST00000381150 SYBUQ9NX95 663 aa14.05□□□□□ -0.16
SDC1-202ENST00000381150 UBP1Q9NZI7 540 aa14.05□□□□□ -0.16
SDC1-202ENST00000381150 TLK1Q9UKI8 766 aa14.05□□□□□ -0.16
SDC1-202ENST00000381150 AP4E1Q9UPM8 1137 aa14.05□□□□□ -0.16
SDC1-202ENST00000381150 ATP6AP2A0A1C7CYW4 349 aa14.05□□□□□ -0.16
SDC1-202ENST00000381150 TMEM247A6NEH6 219 aa14.05□□□□□ -0.16
SDC1-202ENST00000381150 TMEM221A6NGB7 291 aa14.05□□□□□ -0.16
SDC1-202ENST00000381150 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.05□□□□□ -0.16
SDC1-202ENST00000381150 PAPSS1O43252 624 aaPredicted RBP14.05□□□□□ -0.16
SDC1-202ENST00000381150 ATP6AP2O75787 350 aa14.05□□□□□ -0.16
SDC1-202ENST00000381150 SNAI1O95863 264 aaPredicted RBP14.05□□□□□ -0.16
SDC1-202ENST00000381150 C1QAP02745 245 aa14.05□□□□□ -0.16
SDC1-202ENST00000381150 CD247P20963 164 aa14.05□□□□□ -0.16
SDC1-202ENST00000381150 CDH3P22223 829 aa14.05□□□□□ -0.16
SDC1-202ENST00000381150 CYP2F1P24903 491 aa14.05□□□□□ -0.16
SDC1-202ENST00000381150 INCA1Q0VD86 236 aa14.05□□□□□ -0.16
SDC1-202ENST00000381150 TGFBIQ15582 683 aa14.05□□□□□ -0.16
SDC1-202ENST00000381150 ADRM1Q16186 407 aa14.05□□□□□ -0.16
SDC1-202ENST00000381150 CYP2A13Q16696 494 aa14.05□□□□□ -0.16
SDC1-202ENST00000381150 TRIM16LQ309B1 348 aa14.05□□□□□ -0.16
SDC1-202ENST00000381150 TRNP1Q6NT89 227 aa14.05□□□□□ -0.16
SDC1-202ENST00000381150 EPGNQ6UW88 154 aa14.05□□□□□ -0.16
SDC1-202ENST00000381150 RPS27LQ71UM5 84 aaKnown RBP14.05□□□□□ -0.16
SDC1-202ENST00000381150 COLGALT1Q8NBJ5 622 aa14.05□□□□□ -0.16
SDC1-202ENST00000381150 PDZD8Q8NEN9 1154 aa14.05□□□□□ -0.16
SDC1-202ENST00000381150 PLEKHA8Q96JA3 519 aa14.05□□□□□ -0.16
SDC1-202ENST00000381150 RPL10LQ96L21 214 aaKnown RBP14.05□□□□□ -0.16
SDC1-202ENST00000381150 MRPL46Q9H2W6 279 aaKnown RBP14.05□□□□□ -0.16
SDC1-202ENST00000381150 E7ENX8 843 aa14.04□□□□□ -0.16
SDC1-202ENST00000381150 TPD52L2O43399 206 aaKnown RBP14.04□□□□□ -0.16
SDC1-202ENST00000381150 ENDOD1O94919 500 aa14.04□□□□□ -0.16
SDC1-202ENST00000381150 ACAT1P24752 427 aaKnown RBP14.04□□□□□ -0.16
SDC1-202ENST00000381150 SDC4P31431 198 aa14.04□□□□□ -0.16
SDC1-202ENST00000381150 GJA8P48165 433 aa14.04□□□□□ -0.16
SDC1-202ENST00000381150 APOFQ13790 326 aa14.04□□□□□ -0.16
SDC1-202ENST00000381150 AGKQ53H12 422 aa14.04□□□□□ -0.16
SDC1-202ENST00000381150 PIGGQ5H8A4 983 aa14.04□□□□□ -0.16
SDC1-202ENST00000381150 DQX1Q8TE96 717 aaKnown RBP14.04□□□□□ -0.16
SDC1-202ENST00000381150 CNDP1Q96KN2 507 aa14.04□□□□□ -0.16
SDC1-202ENST00000381150 CORO1BQ9BR76 489 aa14.04□□□□□ -0.16
SDC1-202ENST00000381150 SNRNP25Q9BV90 132 aaKnown RBP14.04□□□□□ -0.16
SDC1-202ENST00000381150 B3GNT5Q9BYG0 378 aa14.04□□□□□ -0.16
SDC1-202ENST00000381150 TRIM8Q9BZR9 551 aa14.04□□□□□ -0.16
SDC1-202ENST00000381150 NMRAL1Q9HBL8 299 aa14.04□□□□□ -0.16
SDC1-202ENST00000381150 PNPLA3Q9NST1 481 aa14.04□□□□□ -0.16
SDC1-202ENST00000381150 RNF19AQ9NV58 838 aa14.04□□□□□ -0.16
SDC1-202ENST00000381150 PRPF19Q9UMS4 504 aaKnown RBP14.04□□□□□ -0.16
SDC1-202ENST00000381150 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.04□□□□□ -0.16
SDC1-202ENST00000381150 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.04□□□□□ -0.16
SDC1-202ENST00000381150 TSPAN1O60635 241 aa14.04□□□□□ -0.16
SDC1-202ENST00000381150 PFKMP08237 780 aa14.04□□□□□ -0.16
SDC1-202ENST00000381150 ZNF286BP0CG31 522 aa14.04□□□□□ -0.16
SDC1-202ENST00000381150 HNRNPLP14866 589 aaKnown RBP eCLIP14.04□□□□□ -0.16
SDC1-202ENST00000381150 YBX3P16989 372 aaKnown RBP eCLIP14.04□□□□□ -0.16
SDC1-202ENST00000381150 TSPAN8P19075 237 aa14.04□□□□□ -0.16
SDC1-202ENST00000381150 TFEBP19484 476 aa14.04□□□□□ -0.16
SDC1-202ENST00000381150 ADCYAP1R1P41586 468 aa14.04□□□□□ -0.16
SDC1-202ENST00000381150 PLK1P53350 603 aa14.04□□□□□ -0.16
SDC1-202ENST00000381150 PSME3P61289 254 aa14.04□□□□□ -0.16
SDC1-202ENST00000381150 GEN1Q17RS7 908 aa14.04□□□□□ -0.16
SDC1-202ENST00000381150 C9orf131Q5VYM1 1079 aa14.04□□□□□ -0.16
SDC1-202ENST00000381150 PID1Q7Z2X4 250 aa14.04□□□□□ -0.16
SDC1-202ENST00000381150 CBR4Q8N4T8 237 aa14.04□□□□□ -0.16
SDC1-202ENST00000381150 FRMD8P1Q9BZ68 369 aaPredicted RBP14.04□□□□□ -0.16
SDC1-202ENST00000381150 PIF1Q9H611 641 aa14.04□□□□□ -0.16
SDC1-202ENST00000381150 VTA1Q9NP79 307 aa14.04□□□□□ -0.16
SDC1-202ENST00000381150 DGKBQ9Y6T7 804 aa14.04□□□□□ -0.16
SDC1-202ENST00000381150 COL1A2P08123 1366 aa14.04□□□□□ -0.16
SDC1-202ENST00000381150 BTBD19C9JJ37 291 aa14.03□□□□□ -0.16
SDC1-202ENST00000381150 STAU1O95793 577 aaKnown RBP14.03□□□□□ -0.16
SDC1-202ENST00000381150 FUCA1P04066 466 aa14.03□□□□□ -0.16
SDC1-202ENST00000381150 ATP5BP06576 529 aaKnown RBP14.03□□□□□ -0.16
SDC1-202ENST00000381150 MYL4P12829 197 aa14.03□□□□□ -0.16
SDC1-202ENST00000381150 PPARGP37231 505 aaPredicted RBP14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms