RNA–Protein interactions for RNA: ENST00000381089.7

VCX3A-201, Transcript of variable charge X-linked 3A, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VCX3A, Length 995 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-201ENST00000381089 TRPM6Q9BX84 2022 aa16.33■□□□□ 0.2
VCX3A-201ENST00000381089 BECN2A8MW95 431 aa16.32■□□□□ 0.2
VCX3A-201ENST00000381089 FPGTO14772 594 aa16.32■□□□□ 0.2
VCX3A-201ENST00000381089 SMAD6O43541 496 aaKnown RBP16.32■□□□□ 0.2
VCX3A-201ENST00000381089 CSF2P04141 144 aa16.32■□□□□ 0.2
VCX3A-201ENST00000381089 ERBB2P04626 1255 aa16.32■□□□□ 0.2
VCX3A-201ENST00000381089 ADRB3P13945 408 aa16.32■□□□□ 0.2
VCX3A-201ENST00000381089 NME1P15531 152 aaKnown RBP16.32■□□□□ 0.2
VCX3A-201ENST00000381089 ITGB7P26010 798 aa16.32■□□□□ 0.2
VCX3A-201ENST00000381089 CXCR3P49682 368 aa16.32■□□□□ 0.2
VCX3A-201ENST00000381089 DEUP1Q05D60 604 aa16.32■□□□□ 0.2
VCX3A-201ENST00000381089 EXOC3L4Q17RC7 722 aa16.32■□□□□ 0.2
VCX3A-201ENST00000381089 ISXQ2M1V0 245 aa16.32■□□□□ 0.2
VCX3A-201ENST00000381089 ZNF542PQ5EBM4 170 aa16.32■□□□□ 0.2
VCX3A-201ENST00000381089 GJB7Q6PEY0 223 aa16.32■□□□□ 0.2
VCX3A-201ENST00000381089 IGF2-ASQ6U949 168 aa16.32■□□□□ 0.2
VCX3A-201ENST00000381089 DPY19L3Q6ZPD9 716 aa16.32■□□□□ 0.2
VCX3A-201ENST00000381089 TFAP2DQ7Z6R9 452 aa16.32■□□□□ 0.2
VCX3A-201ENST00000381089 PCDH20Q8N6Y1 951 aaKnown RBP16.32■□□□□ 0.2
VCX3A-201ENST00000381089 SHC3Q92529 594 aa16.32■□□□□ 0.2
VCX3A-201ENST00000381089 VCPIP1Q96JH7 1222 aa16.32■□□□□ 0.2
VCX3A-201ENST00000381089 C1orf74Q96LT6 269 aa16.32■□□□□ 0.2
VCX3A-201ENST00000381089 NPY6RQ99463 290 aa16.32■□□□□ 0.2
VCX3A-201ENST00000381089 IL12RB2Q99665 862 aa16.32■□□□□ 0.2
VCX3A-201ENST00000381089 HEPHQ9BQS7 1158 aa16.32■□□□□ 0.2
VCX3A-201ENST00000381089 SPON2Q9BUD6 331 aa16.32■□□□□ 0.2
VCX3A-201ENST00000381089 PDCL3Q9H2J4 239 aa16.32■□□□□ 0.2
VCX3A-201ENST00000381089 CPNE5Q9HCH3 593 aa16.32■□□□□ 0.2
VCX3A-201ENST00000381089 CFAP46Q8IYW2 2715 aa16.32■□□□□ 0.2
VCX3A-201ENST00000381089 ATMQ13315 3056 aa16.31■□□□□ 0.2
VCX3A-201ENST00000381089 A0A0D9SEW6 157 aa16.31■□□□□ 0.2
VCX3A-201ENST00000381089 SPTY2D1-AS1A0A0U1RR47 76 aa16.31■□□□□ 0.2
VCX3A-201ENST00000381089 ILVBLA1L0T0 632 aa16.31■□□□□ 0.2
VCX3A-201ENST00000381089 CPED1A4D0V7 1026 aa16.31■□□□□ 0.2
VCX3A-201ENST00000381089 DRGXA6NNA5 263 aa16.31■□□□□ 0.2
VCX3A-201ENST00000381089 BIN1O00499 593 aa16.31■□□□□ 0.2
VCX3A-201ENST00000381089 AQP9O43315 295 aa16.31■□□□□ 0.2
VCX3A-201ENST00000381089 AP1G1O43747 822 aa16.31■□□□□ 0.2
VCX3A-201ENST00000381089 LZTS3O60299 673 aaPredicted RBP16.31■□□□□ 0.2
VCX3A-201ENST00000381089 NEBLO76041 1014 aa16.31■□□□□ 0.2
VCX3A-201ENST00000381089 ENDOD1O94919 500 aa16.31■□□□□ 0.2
VCX3A-201ENST00000381089 PAK4O96013 591 aaPredicted RBP16.31■□□□□ 0.2
VCX3A-201ENST00000381089 MYF5P13349 255 aa16.31■□□□□ 0.2
VCX3A-201ENST00000381089 BMP6P22004 513 aa16.31■□□□□ 0.2
VCX3A-201ENST00000381089 L1CAMP32004 1257 aa16.31■□□□□ 0.2
VCX3A-201ENST00000381089 RPIAP49247 311 aa16.31■□□□□ 0.2
VCX3A-201ENST00000381089 DNA2P51530 1060 aa16.31■□□□□ 0.2
VCX3A-201ENST00000381089 RNASE9P60153 205 aaKnown RBP16.31■□□□□ 0.2
VCX3A-201ENST00000381089 VAC14Q08AM6 782 aa16.31■□□□□ 0.2
VCX3A-201ENST00000381089 FZD2Q14332 565 aa16.31■□□□□ 0.2
VCX3A-201ENST00000381089 C3orf38Q5JPI3 329 aa16.31■□□□□ 0.2
VCX3A-201ENST00000381089 PCSK4Q6UW60 755 aa16.31■□□□□ 0.2
VCX3A-201ENST00000381089 WDR48Q8TAF3 677 aa16.31■□□□□ 0.2
VCX3A-201ENST00000381089 BTN2A2Q8WVV5 523 aa16.31■□□□□ 0.2
VCX3A-201ENST00000381089 PGAP3Q96FM1 320 aaPredicted RBP16.31■□□□□ 0.2
VCX3A-201ENST00000381089 BMFQ96LC9 184 aa16.31■□□□□ 0.2
VCX3A-201ENST00000381089 ATP13A1Q9HD20 1204 aa16.31■□□□□ 0.2
VCX3A-201ENST00000381089 GPR27Q9NS67 375 aa16.31■□□□□ 0.2
VCX3A-201ENST00000381089 SALL4Q9UJQ4 1053 aa16.31■□□□□ 0.2
VCX3A-201ENST00000381089 SATB2Q9UPW6 733 aa16.31■□□□□ 0.2
VCX3A-201ENST00000381089 FADS3Q9Y5Q0 445 aa16.31■□□□□ 0.2
VCX3A-201ENST00000381089 LY6G6EA0A0G2JKS1 128 aa16.3■□□□□ 0.2
VCX3A-201ENST00000381089 POM121BA6NF01 834 aa16.3■□□□□ 0.2
VCX3A-201ENST00000381089 NEMP1O14524 444 aa16.3■□□□□ 0.2
VCX3A-201ENST00000381089 TPP1O14773 563 aa16.3■□□□□ 0.2
VCX3A-201ENST00000381089 TCEA3O75764 348 aa16.3■□□□□ 0.2
VCX3A-201ENST00000381089 JUNDP17535 347 aa16.3■□□□□ 0.2
VCX3A-201ENST00000381089 SLC9A1P19634 815 aa16.3■□□□□ 0.2
VCX3A-201ENST00000381089 SERPINH1P50454 418 aaKnown RBP16.3■□□□□ 0.2
VCX3A-201ENST00000381089 BPIFB4P59827 614 aa16.3■□□□□ 0.2
VCX3A-201ENST00000381089 PDE1CQ14123 709 aaPredicted RBP16.3■□□□□ 0.2
VCX3A-201ENST00000381089 PTK2BQ14289 1009 aa16.3■□□□□ 0.2
VCX3A-201ENST00000381089 NR0B2Q15466 257 aa16.3■□□□□ 0.2
VCX3A-201ENST00000381089 CDKN3Q16667 212 aa16.3■□□□□ 0.2
VCX3A-201ENST00000381089 PTPN20Q4JDL3 420 aa16.3■□□□□ 0.2
VCX3A-201ENST00000381089 CARD16Q5EG05 197 aa16.3■□□□□ 0.2
VCX3A-201ENST00000381089 RBM44Q6ZP01 1051 aaKnown RBP16.3■□□□□ 0.2
VCX3A-201ENST00000381089 EFL1Q7Z2Z2 1120 aaKnown RBP16.3■□□□□ 0.2
VCX3A-201ENST00000381089 ARL14Q8N4G2 192 aa16.3■□□□□ 0.2
VCX3A-201ENST00000381089 TMEM35BQ8NCS4 154 aa16.3■□□□□ 0.2
VCX3A-201ENST00000381089 LMX1AQ8TE12 382 aa16.3■□□□□ 0.2
VCX3A-201ENST00000381089 RAB7BQ96AH8 199 aa16.3■□□□□ 0.2
VCX3A-201ENST00000381089 ARHGEF26Q96DR7 871 aa16.3■□□□□ 0.2
VCX3A-201ENST00000381089 LENG8Q96PV6 779 aaPredicted RBP16.3■□□□□ 0.2
VCX3A-201ENST00000381089 ASCL3Q9NQ33 180 aa16.3■□□□□ 0.2
VCX3A-201ENST00000381089 MPP6Q9NZW5 540 aa16.3■□□□□ 0.2
VCX3A-201ENST00000381089 SPASTQ9UBP0 616 aa16.3■□□□□ 0.2
VCX3A-201ENST00000381089 WASF2Q9Y6W5 498 aa16.3■□□□□ 0.2
VCX3A-201ENST00000381089 U3KQA8 63 aa16.3■□□□□ 0.2
VCX3A-201ENST00000381089 COL6A6A6NMZ7 2263 aa16.3■□□□□ 0.2
VCX3A-201ENST00000381089 IGLV3-10A0A075B6K4 115 aa16.29■□□□□ 0.2
VCX3A-201ENST00000381089 GTPBP10A4D1E9 387 aaKnown RBP16.29■□□□□ 0.2
VCX3A-201ENST00000381089 TSPAN6O43657 245 aa16.29■□□□□ 0.2
VCX3A-201ENST00000381089 SRGAP2O75044 1071 aa16.29■□□□□ 0.2
VCX3A-201ENST00000381089 TGM2P21980 687 aa16.29■□□□□ 0.2
VCX3A-201ENST00000381089 SCNN1AP37088 669 aa16.29■□□□□ 0.2
VCX3A-201ENST00000381089 ETFBP38117 255 aa16.29■□□□□ 0.2
VCX3A-201ENST00000381089 CCNHP51946 323 aaPredicted RBP16.29■□□□□ 0.2
VCX3A-201ENST00000381089 THOP1P52888 689 aa16.29■□□□□ 0.2
VCX3A-201ENST00000381089 GEMIN4P57678 1058 aaKnown RBP16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms