RNA–Protein interactions for RNA: ENST00000380518.7

COL2A1-202, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL2A1, Length 5,071 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-202ENST00000380518 SPANXN2Q5MJ10 180 aa16.23■□□□□ 0.19
COL2A1-202ENST00000380518 INTS11Q5TA45 600 aaKnown RBP16.23■□□□□ 0.19
COL2A1-202ENST00000380518 CRELD2Q6UXH1 353 aaPredicted RBP16.23■□□□□ 0.19
COL2A1-202ENST00000380518 PLPPR4Q7Z2D5 763 aa16.23■□□□□ 0.19
COL2A1-202ENST00000380518 HEATR4Q86WZ0 1026 aa16.23■□□□□ 0.19
COL2A1-202ENST00000380518 OR5B17Q8NGF7 314 aa16.23■□□□□ 0.19
COL2A1-202ENST00000380518 TEKT5Q96M29 485 aa16.23■□□□□ 0.19
COL2A1-202ENST00000380518 OLFM1Q99784 485 aa16.23■□□□□ 0.19
COL2A1-202ENST00000380518 TINF2Q9BSI4 451 aa16.23■□□□□ 0.19
COL2A1-202ENST00000380518 MLPHQ9BV36 600 aaPredicted RBP16.23■□□□□ 0.19
COL2A1-202ENST00000380518 ACE2Q9BYF1 805 aaPredicted RBP16.23■□□□□ 0.19
COL2A1-202ENST00000380518 PHACTR1Q9C0D0 580 aa16.23■□□□□ 0.19
COL2A1-202ENST00000380518 FBXO6Q9NRD1 293 aaPredicted RBP16.23■□□□□ 0.19
COL2A1-202ENST00000380518 MYL12BO14950 172 aa16.23■□□□□ 0.19
COL2A1-202ENST00000380518 GUCY1B2O75343 617 aa16.23■□□□□ 0.19
COL2A1-202ENST00000380518 MLYCDO95822 493 aa16.23■□□□□ 0.19
COL2A1-202ENST00000380518 TFEBP19484 476 aa16.23■□□□□ 0.19
COL2A1-202ENST00000380518 RPL7AP62424 266 aaKnown RBP16.23■□□□□ 0.19
COL2A1-202ENST00000380518 INO80DQ53TQ3 878 aaPredicted RBP16.23■□□□□ 0.19
COL2A1-202ENST00000380518 KRT73Q86Y46 540 aa16.23■□□□□ 0.19
COL2A1-202ENST00000380518 UROC1Q96N76 676 aa16.23■□□□□ 0.19
COL2A1-202ENST00000380518 PDGFDQ9GZP0 370 aaPredicted RBP16.23■□□□□ 0.19
COL2A1-202ENST00000380518 VPS45Q9NRW7 570 aa16.23■□□□□ 0.19
COL2A1-202ENST00000380518 BTBD7Q9P203 1132 aa16.23■□□□□ 0.19
COL2A1-202ENST00000380518 LRRIQ1Q96JM4 1722 aa16.23■□□□□ 0.19
COL2A1-202ENST00000380518 SMIM31A0A1B0GVY4 71 aa16.23■□□□□ 0.19
COL2A1-202ENST00000380518 COX4I1P13073 169 aa16.23■□□□□ 0.19
COL2A1-202ENST00000380518 PAX3P23760 479 aa16.23■□□□□ 0.19
COL2A1-202ENST00000380518 CHKAP35790 457 aa16.23■□□□□ 0.19
COL2A1-202ENST00000380518 PSEN1P49768 467 aa16.23■□□□□ 0.19
COL2A1-202ENST00000380518 TTC23Q5W5X9 447 aa16.23■□□□□ 0.19
COL2A1-202ENST00000380518 C8orf59Q8N0T1 100 aaPredicted RBP16.23■□□□□ 0.19
COL2A1-202ENST00000380518 LRMDAQ9H2I8 198 aa16.23■□□□□ 0.19
COL2A1-202ENST00000380518 CYLDQ9NQC7 956 aa16.23■□□□□ 0.19
COL2A1-202ENST00000380518 SPATA31C1P0DKV0 1188 aa16.22■□□□□ 0.19
COL2A1-202ENST00000380518 GRIA4P48058 902 aa16.22■□□□□ 0.19
COL2A1-202ENST00000380518 CLK2P49760 499 aaKnown RBP16.22■□□□□ 0.19
COL2A1-202ENST00000380518 BEX3Q00994 111 aa16.22■□□□□ 0.19
COL2A1-202ENST00000380518 ATP1A4Q13733 1029 aa16.22■□□□□ 0.19
COL2A1-202ENST00000380518 VGLL4Q14135 290 aa16.22■□□□□ 0.19
COL2A1-202ENST00000380518 GRIK5Q16478 980 aa16.22■□□□□ 0.19
COL2A1-202ENST00000380518 MACC1Q6ZN28 852 aa16.22■□□□□ 0.19
COL2A1-202ENST00000380518 FBXW8Q8N3Y1 598 aa16.22■□□□□ 0.19
COL2A1-202ENST00000380518 MBOAT7Q96N66 472 aa16.22■□□□□ 0.19
COL2A1-202ENST00000380518 NLNQ9BYT8 704 aa16.22■□□□□ 0.19
COL2A1-202ENST00000380518 HDHD2Q9H0R4 259 aa16.22■□□□□ 0.19
COL2A1-202ENST00000380518 BIRC5O15392 142 aa16.22■□□□□ 0.19
COL2A1-202ENST00000380518 ITGB5P18084 799 aa16.22■□□□□ 0.19
COL2A1-202ENST00000380518 GTF2E2P29084 291 aaKnown RBP16.22■□□□□ 0.19
COL2A1-202ENST00000380518 NUP62P37198 522 aaPredicted RBP16.22■□□□□ 0.19
COL2A1-202ENST00000380518 TTPAP49638 278 aa16.22■□□□□ 0.19
COL2A1-202ENST00000380518 TIMM50Q3ZCQ8 353 aa16.22■□□□□ 0.19
COL2A1-202ENST00000380518 RAP1GAP2Q684P5 730 aa16.22■□□□□ 0.19
COL2A1-202ENST00000380518 CDC73Q6P1J9 531 aa16.22■□□□□ 0.19
COL2A1-202ENST00000380518 AGAP11Q8TF27 550 aa16.22■□□□□ 0.19
COL2A1-202ENST00000380518 COPS5Q92905 334 aa16.22■□□□□ 0.19
COL2A1-202ENST00000380518 ZYG11BQ9C0D3 744 aa16.22■□□□□ 0.19
COL2A1-202ENST00000380518 ASB8Q9H765 288 aa16.22■□□□□ 0.19
COL2A1-202ENST00000380518 ATAD3AQ9NVI7 634 aa16.22■□□□□ 0.19
COL2A1-202ENST00000380518 LEF1Q9UJU2 399 aaPredicted RBP16.22■□□□□ 0.19
COL2A1-202ENST00000380518 SNX6Q9UNH7 406 aa16.22■□□□□ 0.19
COL2A1-202ENST00000380518 RAP2CQ9Y3L5 183 aa16.22■□□□□ 0.19
COL2A1-202ENST00000380518 RGSL1A5PLK6 1076 aa16.22■□□□□ 0.19
COL2A1-202ENST00000380518 ALOX15BO15296 676 aa16.22■□□□□ 0.19
COL2A1-202ENST00000380518 ERBB2P04626 1255 aa16.22■□□□□ 0.19
COL2A1-202ENST00000380518 PREPLQ4J6C6 727 aaPredicted RBP16.22■□□□□ 0.19
COL2A1-202ENST00000380518 HECTD3Q5T447 861 aa16.22■□□□□ 0.19
COL2A1-202ENST00000380518 AADATQ8N5Z0 425 aa16.22■□□□□ 0.19
COL2A1-202ENST00000380518 ATL1Q8WXF7 558 aa16.22■□□□□ 0.19
COL2A1-202ENST00000380518 CENPIQ92674 756 aaPredicted RBP16.22■□□□□ 0.19
COL2A1-202ENST00000380518 MRPL57Q9BQC6 102 aaKnown RBP16.22■□□□□ 0.19
COL2A1-202ENST00000380518 SPRTNQ9H040 489 aaPredicted RBP16.22■□□□□ 0.19
COL2A1-202ENST00000380518 GEMIN8Q9NWZ8 242 aaKnown RBP16.22■□□□□ 0.19
COL2A1-202ENST00000380518 MTF2Q9Y483 593 aaPredicted RBP16.22■□□□□ 0.19
COL2A1-202ENST00000380518 HES2Q9Y543 173 aa16.22■□□□□ 0.19
COL2A1-202ENST00000380518 TGFB1I1O43294 461 aa16.22■□□□□ 0.19
COL2A1-202ENST00000380518 ITGA2BP08514 1039 aa16.22■□□□□ 0.19
COL2A1-202ENST00000380518 DRD4P21917 467 aa16.22■□□□□ 0.19
COL2A1-202ENST00000380518 PSME3P61289 254 aa16.22■□□□□ 0.19
COL2A1-202ENST00000380518 GNA13Q14344 377 aa16.22■□□□□ 0.19
COL2A1-202ENST00000380518 RDH11Q8TC12 318 aa16.22■□□□□ 0.19
COL2A1-202ENST00000380518 PTCD3Q96EY7 689 aaKnown RBP16.22■□□□□ 0.19
COL2A1-202ENST00000380518 RNPEPQ9H4A4 650 aa16.22■□□□□ 0.19
COL2A1-202ENST00000380518 PEX11AO75192 247 aa16.21■□□□□ 0.19
COL2A1-202ENST00000380518 POLR2EP19388 210 aaKnown RBP16.21■□□□□ 0.19
COL2A1-202ENST00000380518 TNFSF9P41273 254 aa16.21■□□□□ 0.19
COL2A1-202ENST00000380518 RAB10P61026 200 aa16.21■□□□□ 0.19
COL2A1-202ENST00000380518 TRAF3Q13114 568 aa16.21■□□□□ 0.19
COL2A1-202ENST00000380518 NRF1Q16656 503 aa16.21■□□□□ 0.19
COL2A1-202ENST00000380518 PPM1LQ5SGD2 360 aa16.21■□□□□ 0.19
COL2A1-202ENST00000380518 RD3Q7Z3Z2 195 aa16.21■□□□□ 0.19
COL2A1-202ENST00000380518 TRAPPC5Q8IUR0 188 aa16.21■□□□□ 0.19
COL2A1-202ENST00000380518 FBXO30Q8TB52 745 aa16.21■□□□□ 0.19
COL2A1-202ENST00000380518 OSBPL6Q9BZF3 934 aa16.21■□□□□ 0.19
COL2A1-202ENST00000380518 RNF19AQ9NV58 838 aa16.21■□□□□ 0.19
COL2A1-202ENST00000380518 ENTPD4Q9Y227 616 aa16.21■□□□□ 0.19
COL2A1-202ENST00000380518 SESN1Q9Y6P5 492 aa16.21■□□□□ 0.19
COL2A1-202ENST00000380518 BCLAF3A2AJT9 711 aaKnown RBP16.21■□□□□ 0.19
COL2A1-202ENST00000380518 CARNS1A5YM72 827 aa16.21■□□□□ 0.19
COL2A1-202ENST00000380518 MTA2O94776 668 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms