RNA–Protein interactions for RNA: ENST00000380281.5

PRPF40B-202, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,154 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-202ENST00000380281 IL1RL2Q9HB29 575 aa12.65□□□□□ -0.38
PRPF40B-202ENST00000380281 TCF7L2Q9NQB0 619 aa12.65□□□□□ -0.38
PRPF40B-202ENST00000380281 GTSE1Q9NYZ3 720 aa12.65□□□□□ -0.38
PRPF40B-202ENST00000380281 RBPJLQ9UBG7 517 aa12.65□□□□□ -0.38
PRPF40B-202ENST00000380281 GPC6Q9Y625 555 aaPredicted RBP12.65□□□□□ -0.38
PRPF40B-202ENST00000380281 CROCCQ5TZA2 2017 aa12.65□□□□□ -0.38
PRPF40B-202ENST00000380281 IGKV6-21A0A0C4DH24 114 aa12.65□□□□□ -0.39
PRPF40B-202ENST00000380281 ATP6AP2A0A1C7CYW4 349 aa12.65□□□□□ -0.39
PRPF40B-202ENST00000380281 CASQ2O14958 399 aaPredicted RBP12.65□□□□□ -0.39
PRPF40B-202ENST00000380281 ATP6AP2O75787 350 aa12.65□□□□□ -0.39
PRPF40B-202ENST00000380281 KLHL2O95198 593 aa12.65□□□□□ -0.39
PRPF40B-202ENST00000380281 MCF2P10911 925 aa12.65□□□□□ -0.39
PRPF40B-202ENST00000380281 XRCC1P18887 633 aaPredicted RBP12.65□□□□□ -0.39
PRPF40B-202ENST00000380281 CDK9P50750 372 aaKnown RBP12.65□□□□□ -0.39
PRPF40B-202ENST00000380281 TNFAIP2Q03169 654 aa12.65□□□□□ -0.39
PRPF40B-202ENST00000380281 ENPEPQ07075 957 aa12.65□□□□□ -0.39
PRPF40B-202ENST00000380281 KLF10Q13118 480 aa12.65□□□□□ -0.39
PRPF40B-202ENST00000380281 GRM1Q13255 1194 aa12.65□□□□□ -0.39
PRPF40B-202ENST00000380281 TUBB3Q13509 450 aa12.65□□□□□ -0.39
PRPF40B-202ENST00000380281 ADRM1Q16186 407 aa12.65□□□□□ -0.39
PRPF40B-202ENST00000380281 ZNF423Q2M1K9 1284 aa12.65□□□□□ -0.39
PRPF40B-202ENST00000380281 C16orf87Q6PH81 154 aa12.65□□□□□ -0.39
PRPF40B-202ENST00000380281 KBTBD6Q86V97 674 aa12.65□□□□□ -0.39
PRPF40B-202ENST00000380281 SIX6OS1Q8N1H7 587 aa12.65□□□□□ -0.39
PRPF40B-202ENST00000380281 LZTR1Q8N653 840 aa12.65□□□□□ -0.39
PRPF40B-202ENST00000380281 ACTRT2Q8TDY3 377 aa12.65□□□□□ -0.39
PRPF40B-202ENST00000380281 DRC3Q9H069 523 aa12.65□□□□□ -0.39
PRPF40B-202ENST00000380281 ASB7Q9H672 318 aa12.65□□□□□ -0.39
PRPF40B-202ENST00000380281 VANGL2Q9ULK5 521 aa12.65□□□□□ -0.39
PRPF40B-202ENST00000380281 RUVBL2Q9Y230 463 aaKnown RBP12.65□□□□□ -0.39
PRPF40B-202ENST00000380281 POLR2AP24928 1970 aaKnown RBP12.64□□□□□ -0.39
PRPF40B-202ENST00000380281 MGAMO43451 1857 aa12.64□□□□□ -0.39
PRPF40B-202ENST00000380281 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.64□□□□□ -0.39
PRPF40B-202ENST00000380281 GCATO75600 419 aa12.64□□□□□ -0.39
PRPF40B-202ENST00000380281 MT-CYBP00156 380 aaPredicted RBP12.64□□□□□ -0.39
PRPF40B-202ENST00000380281 ERCC2P18074 760 aa12.64□□□□□ -0.39
PRPF40B-202ENST00000380281 NDST2P52849 883 aa12.64□□□□□ -0.39
PRPF40B-202ENST00000380281 FLOT2Q14254 428 aa12.64□□□□□ -0.39
PRPF40B-202ENST00000380281 PITRM1Q5JRX3 1037 aa12.64□□□□□ -0.39
PRPF40B-202ENST00000380281 DENND6AQ8IWF6 608 aa12.64□□□□□ -0.39
PRPF40B-202ENST00000380281 MCUQ8NE86 351 aa12.64□□□□□ -0.39
PRPF40B-202ENST00000380281 C12orf42Q96LP6 360 aa12.64□□□□□ -0.39
PRPF40B-202ENST00000380281 CAMKK2Q96RR4 588 aa12.64□□□□□ -0.39
PRPF40B-202ENST00000380281 FTHL17Q9BXU8 183 aa12.64□□□□□ -0.39
PRPF40B-202ENST00000380281 PNPLA8Q9NP80 782 aa12.64□□□□□ -0.39
PRPF40B-202ENST00000380281 CHST12Q9NRB3 414 aa12.64□□□□□ -0.39
PRPF40B-202ENST00000380281 BFARQ9NZS9 450 aa12.64□□□□□ -0.39
PRPF40B-202ENST00000380281 TLK1Q9UKI8 766 aa12.64□□□□□ -0.39
PRPF40B-202ENST00000380281 DFFAO00273 331 aa12.64□□□□□ -0.39
PRPF40B-202ENST00000380281 NCAM1P13591 858 aa12.64□□□□□ -0.39
PRPF40B-202ENST00000380281 CDH3P22223 829 aa12.64□□□□□ -0.39
PRPF40B-202ENST00000380281 NMBRP28336 390 aa12.64□□□□□ -0.39
PRPF40B-202ENST00000380281 GP5P40197 560 aa12.64□□□□□ -0.39
PRPF40B-202ENST00000380281 THOP1P52888 689 aa12.64□□□□□ -0.39
PRPF40B-202ENST00000380281 CACNB2Q08289 660 aaPredicted RBP12.64□□□□□ -0.39
PRPF40B-202ENST00000380281 PCSK7Q16549 785 aa12.64□□□□□ -0.39
PRPF40B-202ENST00000380281 FBXO48Q5FWF7 155 aa12.64□□□□□ -0.39
PRPF40B-202ENST00000380281 NOMO2Q5JPE7 1267 aa12.64□□□□□ -0.39
PRPF40B-202ENST00000380281 NANOGP8Q6NSW7 305 aa12.64□□□□□ -0.39
PRPF40B-202ENST00000380281 IPMKQ8NFU5 416 aa12.64□□□□□ -0.39
PRPF40B-202ENST00000380281 HASPINQ8TF76 798 aa12.64□□□□□ -0.39
PRPF40B-202ENST00000380281 JADE3Q92613 823 aa12.64□□□□□ -0.39
PRPF40B-202ENST00000380281 CMTM5Q96DZ9 223 aa12.64□□□□□ -0.39
PRPF40B-202ENST00000380281 TPK1Q9H3S4 243 aa12.64□□□□□ -0.39
PRPF40B-202ENST00000380281 PIGVQ9NUD9 493 aa12.64□□□□□ -0.39
PRPF40B-202ENST00000380281 DCDC2Q9UHG0 476 aa12.64□□□□□ -0.39
PRPF40B-202ENST00000380281 VPS51Q9UID3 782 aa12.64□□□□□ -0.39
PRPF40B-202ENST00000380281 ZNF112Q9UJU3 913 aa12.64□□□□□ -0.39
PRPF40B-202ENST00000380281 PMPCBO75439 489 aa12.63□□□□□ -0.39
PRPF40B-202ENST00000380281 USP17L7P0C7H9 530 aa12.63□□□□□ -0.39
PRPF40B-202ENST00000380281 NFKB1P19838 968 aa12.63□□□□□ -0.39
PRPF40B-202ENST00000380281 GRM3Q14832 879 aa12.63□□□□□ -0.39
PRPF40B-202ENST00000380281 CYP2A13Q16696 494 aa12.63□□□□□ -0.39
PRPF40B-202ENST00000380281 RARS2Q5T160 578 aaKnown RBP12.63□□□□□ -0.39
PRPF40B-202ENST00000380281 PGM2L1Q6PCE3 622 aa12.63□□□□□ -0.39
PRPF40B-202ENST00000380281 BORAQ6PGQ7 559 aa12.63□□□□□ -0.39
PRPF40B-202ENST00000380281 ZNF354CQ86Y25 554 aa12.63□□□□□ -0.39
PRPF40B-202ENST00000380281 APOBEC3FQ8IUX4 373 aaKnown RBP12.63□□□□□ -0.39
PRPF40B-202ENST00000380281 SLC41A1Q8IVJ1 513 aa12.63□□□□□ -0.39
PRPF40B-202ENST00000380281 QKIQ96PU8 341 aaKnown RBP eCLIP12.63□□□□□ -0.39
PRPF40B-202ENST00000380281 SLC4A5Q9BY07 1137 aa12.63□□□□□ -0.39
PRPF40B-202ENST00000380281 DDIT4Q9NX09 232 aa12.63□□□□□ -0.39
PRPF40B-202ENST00000380281 PLK2Q9NYY3 685 aa12.63□□□□□ -0.39
PRPF40B-202ENST00000380281 ZNHIT2Q9UHR6 403 aa12.63□□□□□ -0.39
PRPF40B-202ENST00000380281 ARHGAP26Q9UNA1 814 aa12.63□□□□□ -0.39
PRPF40B-202ENST00000380281 PPME1Q9Y570 386 aa12.63□□□□□ -0.39
PRPF40B-202ENST00000380281 TLL2Q9Y6L7 1015 aa12.63□□□□□ -0.39
PRPF40B-202ENST00000380281 BPTFQ12830 3046 aa12.63□□□□□ -0.39
PRPF40B-202ENST00000380281 MEIS3P2A8K0S8 358 aa12.63□□□□□ -0.39
PRPF40B-202ENST00000380281 NRP1O14786 923 aa12.63□□□□□ -0.39
PRPF40B-202ENST00000380281 TPST1O60507 370 aa12.63□□□□□ -0.39
PRPF40B-202ENST00000380281 MOCS2O96007 188 aaPredicted RBP12.63□□□□□ -0.39
PRPF40B-202ENST00000380281 PRKCGP05129 697 aa12.63□□□□□ -0.39
PRPF40B-202ENST00000380281 PGAM1P18669 254 aa12.63□□□□□ -0.39
PRPF40B-202ENST00000380281 C21orf59P57076 290 aa12.63□□□□□ -0.39
PRPF40B-202ENST00000380281 ART3Q13508 389 aa12.63□□□□□ -0.39
PRPF40B-202ENST00000380281 DPYSL2Q16555 572 aa12.63□□□□□ -0.39
PRPF40B-202ENST00000380281 LSM12Q3MHD2 195 aaKnown RBP12.63□□□□□ -0.39
PRPF40B-202ENST00000380281 ARL13AQ5H913 290 aaPredicted RBP12.63□□□□□ -0.39
PRPF40B-202ENST00000380281 RYBPQ8N488 228 aaPredicted RBP12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms