RNA–Protein interactions for RNA: ENST00000378156.8

NPHP4-201, Transcript of nephrocystin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP4, Length 4,994 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-201ENST00000378156 TFAP2BQ92481 460 aa15.21■□□□□ 0.02
NPHP4-201ENST00000378156 CERS2Q96G23 380 aa15.21■□□□□ 0.02
NPHP4-201ENST00000378156 CDRT15Q96T59 188 aa15.21■□□□□ 0.02
NPHP4-201ENST00000378156 PDZD7Q9H5P4 517 aa15.21■□□□□ 0.02
NPHP4-201ENST00000378156 TMEM59LQ9UK28 342 aa15.21■□□□□ 0.02
NPHP4-201ENST00000378156 CRYL1Q9Y2S2 319 aa15.21■□□□□ 0.02
NPHP4-201ENST00000378156 KPNA3O00505 521 aaPredicted RBP15.2■□□□□ 0.02
NPHP4-201ENST00000378156 RAD51BO15315 384 aa15.2■□□□□ 0.02
NPHP4-201ENST00000378156 NAGLUP54802 743 aa15.2■□□□□ 0.02
NPHP4-201ENST00000378156 DDR2Q16832 855 aa15.2■□□□□ 0.02
NPHP4-201ENST00000378156 ATP6AP1LQ52LC2 224 aa15.2■□□□□ 0.02
NPHP4-201ENST00000378156 LACTB2Q53H82 288 aaPredicted RBP15.2■□□□□ 0.02
NPHP4-201ENST00000378156 SDHAF4Q5VUM1 108 aa15.2■□□□□ 0.02
NPHP4-201ENST00000378156 XYLT1Q86Y38 959 aa15.2■□□□□ 0.02
NPHP4-201ENST00000378156 SIAH1Q8IUQ4 282 aa15.2■□□□□ 0.02
NPHP4-201ENST00000378156 NTPCRQ9BSD7 190 aaKnown RBP15.2■□□□□ 0.02
NPHP4-201ENST00000378156 CNTNAP1P78357 1384 aa15.2■□□□□ 0.02
NPHP4-201ENST00000378156 TMEM88BA6NKF7 163 aa15.2■□□□□ 0.02
NPHP4-201ENST00000378156 CCNT2O60583 730 aaKnown RBP15.2■□□□□ 0.02
NPHP4-201ENST00000378156 ZMPSTE24O75844 475 aa15.2■□□□□ 0.02
NPHP4-201ENST00000378156 BCL10O95999 233 aa15.2■□□□□ 0.02
NPHP4-201ENST00000378156 UNGP13051 313 aaPredicted RBP15.2■□□□□ 0.02
NPHP4-201ENST00000378156 SERPINA4P29622 427 aa15.2■□□□□ 0.02
NPHP4-201ENST00000378156 NOMO1Q15155 1222 aa15.2■□□□□ 0.02
NPHP4-201ENST00000378156 NOL9Q5SY16 702 aaKnown RBP15.2■□□□□ 0.02
NPHP4-201ENST00000378156 LRRC8DQ7L1W4 858 aa15.2■□□□□ 0.02
NPHP4-201ENST00000378156 MON1AQ86VX9 555 aa15.2■□□□□ 0.02
NPHP4-201ENST00000378156 PHACTR4Q8IZ21 702 aa15.2■□□□□ 0.02
NPHP4-201ENST00000378156 MGAT4DA6NG13 374 aa15.2■□□□□ 0.02
NPHP4-201ENST00000378156 FAM155BO75949 473 aa15.2■□□□□ 0.02
NPHP4-201ENST00000378156 ALDH1A2O94788 518 aa15.2■□□□□ 0.02
NPHP4-201ENST00000378156 PTP4A2Q12974 167 aa15.2■□□□□ 0.02
NPHP4-201ENST00000378156 ZFP1Q6P2D0 407 aa15.2■□□□□ 0.02
NPHP4-201ENST00000378156 TMC5Q6UXY8 1006 aa15.2■□□□□ 0.02
NPHP4-201ENST00000378156 CROCCP3Q8IVE0 287 aa15.2■□□□□ 0.02
NPHP4-201ENST00000378156 TMEM199Q8N511 208 aa15.2■□□□□ 0.02
NPHP4-201ENST00000378156 ZFP42Q96MM3 310 aa15.2■□□□□ 0.02
NPHP4-201ENST00000378156 VTI1BQ9UEU0 232 aa15.2■□□□□ 0.02
NPHP4-201ENST00000378156 POLG2Q9UHN1 485 aa15.2■□□□□ 0.02
NPHP4-201ENST00000378156 PACSIN3Q9UKS6 424 aa15.2■□□□□ 0.02
NPHP4-201ENST00000378156 PADI3Q9ULW8 664 aa15.2■□□□□ 0.02
NPHP4-201ENST00000378156 BAZ2AQ9UIF9 1905 aaKnown RBP15.2■□□□□ 0.02
NPHP4-201ENST00000378156 OR6C75A6NL08 312 aa15.19■□□□□ 0.02
NPHP4-201ENST00000378156 F8W810 466 aa15.19■□□□□ 0.02
NPHP4-201ENST00000378156 CD86P42081 329 aa15.19■□□□□ 0.02
NPHP4-201ENST00000378156 BOP1Q14137 746 aaKnown RBP15.19■□□□□ 0.02
NPHP4-201ENST00000378156 SLC25A52Q3SY17 297 aa15.19■□□□□ 0.02
NPHP4-201ENST00000378156 STRADAQ7RTN6 431 aa15.19■□□□□ 0.02
NPHP4-201ENST00000378156 PPP1R10Q96QC0 940 aaKnown RBP15.19■□□□□ 0.02
NPHP4-201ENST00000378156 ZNF184Q99676 751 aaPredicted RBP15.19■□□□□ 0.02
NPHP4-201ENST00000378156 ZCCHC2Q9C0B9 1178 aaKnown RBP15.19■□□□□ 0.02
NPHP4-201ENST00000378156 POLE3Q9NRF9 147 aa15.19■□□□□ 0.02
NPHP4-201ENST00000378156 SCAMP3O14828 347 aaKnown RBP15.19■□□□□ 0.02
NPHP4-201ENST00000378156 TSPAN1O60635 241 aa15.19■□□□□ 0.02
NPHP4-201ENST00000378156 ARIH2O95376 493 aa15.19■□□□□ 0.02
NPHP4-201ENST00000378156 IMPDH2P12268 514 aa15.19■□□□□ 0.02
NPHP4-201ENST00000378156 PSMD5Q16401 504 aa15.19■□□□□ 0.02
NPHP4-201ENST00000378156 MPP4Q96JB8 637 aa15.19■□□□□ 0.02
NPHP4-201ENST00000378156 DEFB118Q96PH6 123 aa15.19■□□□□ 0.02
NPHP4-201ENST00000378156 GNG14A0A1W2PPG7 69 aa15.19■□□□□ 0.02
NPHP4-201ENST00000378156 NT5C1B-RDH14C9J2C7 533 aa15.19■□□□□ 0.02
NPHP4-201ENST00000378156 ASGR1P07306 291 aa15.19■□□□□ 0.02
NPHP4-201ENST00000378156 GRK3P35626 688 aa15.19■□□□□ 0.02
NPHP4-201ENST00000378156 SKIV2L2P42285 1042 aaKnown RBP15.19■□□□□ 0.02
NPHP4-201ENST00000378156 PKNOX1P55347 436 aa15.19■□□□□ 0.02
NPHP4-201ENST00000378156 UBAP2LQ14157 1087 aaKnown RBP15.19■□□□□ 0.02
NPHP4-201ENST00000378156 RMND5BQ96G75 393 aaPredicted RBP15.19■□□□□ 0.02
NPHP4-201ENST00000378156 PANX3Q96QZ0 392 aa15.19■□□□□ 0.02
NPHP4-201ENST00000378156 RBPJLQ9UBG7 517 aa15.19■□□□□ 0.02
NPHP4-201ENST00000378156 IFRD1O00458 451 aaPredicted RBP15.19■□□□□ 0.02
NPHP4-201ENST00000378156 TLR5O60602 858 aa15.19■□□□□ 0.02
NPHP4-201ENST00000378156 SMPD1P17405 629 aa15.19■□□□□ 0.02
NPHP4-201ENST00000378156 CYP1B1Q16678 543 aa15.19■□□□□ 0.02
NPHP4-201ENST00000378156 RNASEH2BQ5TBB1 312 aaKnown RBP15.19■□□□□ 0.02
NPHP4-201ENST00000378156 ISLR2Q6UXK2 745 aa15.19■□□□□ 0.02
NPHP4-201ENST00000378156 SPG21Q9NZD8 308 aa15.19■□□□□ 0.02
NPHP4-201ENST00000378156 FZD9O00144 591 aa15.18■□□□□ 0.02
NPHP4-201ENST00000378156 LYPLA1O75608 230 aaPredicted RBP15.18■□□□□ 0.02
NPHP4-201ENST00000378156 BAIAP3O94812 1187 aa15.18■□□□□ 0.02
NPHP4-201ENST00000378156 OR56A5P0C7T3 313 aa15.18■□□□□ 0.02
NPHP4-201ENST00000378156 FMO4P31512 558 aa15.18■□□□□ 0.02
NPHP4-201ENST00000378156 SLC24A5Q71RS6 500 aa15.18■□□□□ 0.02
NPHP4-201ENST00000378156 TRMT11Q7Z4G4 463 aaKnown RBP15.18■□□□□ 0.02
NPHP4-201ENST00000378156 TNS4Q8IZW8 715 aa15.18■□□□□ 0.02
NPHP4-201ENST00000378156 ZCCHC7Q8N3Z6 543 aaKnown RBP15.18■□□□□ 0.02
NPHP4-201ENST00000378156 MCOLN3Q8TDD5 553 aa15.18■□□□□ 0.02
NPHP4-201ENST00000378156 MID1IP1Q9NPA3 183 aa15.18■□□□□ 0.02
NPHP4-201ENST00000378156 MAN1C1Q9NR34 630 aa15.18■□□□□ 0.02
NPHP4-201ENST00000378156 C2orf71A6NGG8 1288 aa15.18■□□□□ 0.02
NPHP4-201ENST00000378156 POLR2EP19388 210 aaKnown RBP15.18■□□□□ 0.02
NPHP4-201ENST00000378156 CYP2A7P20853 494 aa15.18■□□□□ 0.02
NPHP4-201ENST00000378156 GPC1P35052 558 aa15.18■□□□□ 0.02
NPHP4-201ENST00000378156 PURAQ00577 322 aaKnown RBP15.18■□□□□ 0.02
NPHP4-201ENST00000378156 BNIP1Q12981 228 aa15.18■□□□□ 0.02
NPHP4-201ENST00000378156 DSG4Q86SJ6 1040 aa15.18■□□□□ 0.02
NPHP4-201ENST00000378156 DENND1CQ8IV53 801 aa15.18■□□□□ 0.02
NPHP4-201ENST00000378156 CYP4X1Q8N118 509 aa15.18■□□□□ 0.02
NPHP4-201ENST00000378156 FCRL2Q96LA5 508 aaPredicted RBP15.18■□□□□ 0.02
NPHP4-201ENST00000378156 SEMA3CQ99985 751 aa15.18■□□□□ 0.02
NPHP4-201ENST00000378156 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP15.18■□□□□ 0.024e-6■□□□□ 8.5
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms