RNA–Protein interactions for RNA: ENST00000378133.4

PCDHA1-201, Transcript of protocadherin alpha 1, humanhuman

BASIC

Gene PCDHA1, Length 2,726 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-201ENST00000378133 SPRP35270 261 aaPredicted RBP16.85■□□□□ 0.29
PCDHA1-201ENST00000378133 NUMBP49757 651 aa16.85■□□□□ 0.29
PCDHA1-201ENST00000378133 RABGGTBP53611 331 aa16.85■□□□□ 0.29
PCDHA1-201ENST00000378133 NOTUMQ6P988 496 aa16.85■□□□□ 0.29
PCDHA1-201ENST00000378133 HFE2Q6ZVN8 426 aa16.85■□□□□ 0.29
PCDHA1-201ENST00000378133 TMEM102Q8N9M5 508 aaPredicted RBP16.85■□□□□ 0.29
PCDHA1-201ENST00000378133 ADAM32Q8TC27 787 aa16.85■□□□□ 0.29
PCDHA1-201ENST00000378133 MFSD3Q96ES6 412 aa16.85■□□□□ 0.29
PCDHA1-201ENST00000378133 KLHL32Q96NJ5 620 aa16.85■□□□□ 0.29
PCDHA1-201ENST00000378133 NPY6RQ99463 290 aa16.85■□□□□ 0.29
PCDHA1-201ENST00000378133 CAAP1Q9H8G2 361 aa16.85■□□□□ 0.29
PCDHA1-201ENST00000378133 EPS15L1Q9UBC2 864 aa16.85■□□□□ 0.29
PCDHA1-201ENST00000378133 VANGL2Q9ULK5 521 aa16.85■□□□□ 0.29
PCDHA1-201ENST00000378133 RNF11Q9Y3C5 154 aa16.85■□□□□ 0.29
PCDHA1-201ENST00000378133 A0A096LPK6 155 aa16.84■□□□□ 0.29
PCDHA1-201ENST00000378133 STX16-NPEPL1H3BU86 382 aa16.84■□□□□ 0.29
PCDHA1-201ENST00000378133 RNASEH2AO75792 299 aaKnown RBP16.84■□□□□ 0.29
PCDHA1-201ENST00000378133 AMHP03971 560 aa16.84■□□□□ 0.29
PCDHA1-201ENST00000378133 ZNF26P17031 533 aaPredicted RBP16.84■□□□□ 0.29
PCDHA1-201ENST00000378133 STT3AP46977 705 aa16.84■□□□□ 0.29
PCDHA1-201ENST00000378133 PLOD1Q02809 727 aaPredicted RBP16.84■□□□□ 0.29
PCDHA1-201ENST00000378133 PAFAH1B3Q15102 231 aaKnown RBP16.84■□□□□ 0.29
PCDHA1-201ENST00000378133 ZNF792Q3KQV3 632 aa16.84■□□□□ 0.29
PCDHA1-201ENST00000378133 PSTKQ8IV42 348 aaKnown RBP16.84■□□□□ 0.29
PCDHA1-201ENST00000378133 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.84■□□□□ 0.29
PCDHA1-201ENST00000378133 RNF169Q8NCN4 708 aa16.84■□□□□ 0.29
PCDHA1-201ENST00000378133 CNDP1Q96KN2 507 aa16.84■□□□□ 0.29
PCDHA1-201ENST00000378133 ZNF512Q96ME7 567 aaPredicted RBP16.84■□□□□ 0.29
PCDHA1-201ENST00000378133 RNF39Q9H2S5 420 aa16.84■□□□□ 0.29
PCDHA1-201ENST00000378133 WDR41Q9HAD4 459 aa16.84■□□□□ 0.29
PCDHA1-201ENST00000378133 FAIMQ9NVQ4 179 aa16.84■□□□□ 0.29
PCDHA1-201ENST00000378133 BCAS2O75934 225 aaPredicted RBP16.84■□□□□ 0.29
PCDHA1-201ENST00000378133 H6PDO95479 791 aa16.84■□□□□ 0.29
PCDHA1-201ENST00000378133 ERCC2P18074 760 aa16.84■□□□□ 0.29
PCDHA1-201ENST00000378133 TCN1P20061 433 aaPredicted RBP16.84■□□□□ 0.29
PCDHA1-201ENST00000378133 PTPN3P26045 913 aa16.84■□□□□ 0.29
PCDHA1-201ENST00000378133 EPHA3P29320 983 aa16.84■□□□□ 0.29
PCDHA1-201ENST00000378133 LIMK2P53671 638 aa16.84■□□□□ 0.29
PCDHA1-201ENST00000378133 SOX4Q06945 474 aaPredicted RBP16.84■□□□□ 0.29
PCDHA1-201ENST00000378133 ART3Q13508 389 aa16.84■□□□□ 0.29
PCDHA1-201ENST00000378133 DPYSQ14117 519 aa16.84■□□□□ 0.29
PCDHA1-201ENST00000378133 MGAT5BQ3V5L5 792 aa16.84■□□□□ 0.29
PCDHA1-201ENST00000378133 CHERPQ8IWX8 916 aaKnown RBP16.84■□□□□ 0.29
PCDHA1-201ENST00000378133 PGAM4Q8N0Y7 254 aa16.84■□□□□ 0.29
PCDHA1-201ENST00000378133 SMYD1Q8NB12 490 aa16.84■□□□□ 0.29
PCDHA1-201ENST00000378133 B3GALNT2Q8NCR0 500 aa16.84■□□□□ 0.29
PCDHA1-201ENST00000378133 ACVR1CQ8NER5 493 aa16.84■□□□□ 0.29
PCDHA1-201ENST00000378133 APOL2Q9BQE5 337 aa16.84■□□□□ 0.29
PCDHA1-201ENST00000378133 DUSP16Q9BY84 665 aa16.84■□□□□ 0.29
PCDHA1-201ENST00000378133 NUF2Q9BZD4 464 aa16.84■□□□□ 0.29
PCDHA1-201ENST00000378133 VTA1Q9NP79 307 aa16.84■□□□□ 0.29
PCDHA1-201ENST00000378133 TBCCD1Q9NVR7 557 aa16.84■□□□□ 0.29
PCDHA1-201ENST00000378133 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.84■□□□□ 0.29
PCDHA1-201ENST00000378133 BFARQ9NZS9 450 aa16.84■□□□□ 0.29
PCDHA1-201ENST00000378133 CNOT11Q9UKZ1 510 aaKnown RBP16.84■□□□□ 0.29
PCDHA1-201ENST00000378133 ZCWPW2A0A1B0GU75 182 aa16.83■□□□□ 0.29
PCDHA1-201ENST00000378133 ARHGEF37A1IGU5 675 aa16.83■□□□□ 0.29
PCDHA1-201ENST00000378133 C7orf72A4D263 438 aa16.83■□□□□ 0.29
PCDHA1-201ENST00000378133 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.83■□□□□ 0.29
PCDHA1-201ENST00000378133 G3V2L1 256 aa16.83■□□□□ 0.29
PCDHA1-201ENST00000378133 DCLK1O15075 740 aa16.83■□□□□ 0.29
PCDHA1-201ENST00000378133 GPR32O75388 356 aa16.83■□□□□ 0.29
PCDHA1-201ENST00000378133 DAB1O75553 588 aa16.83■□□□□ 0.29
PCDHA1-201ENST00000378133 NELFEP18615 380 aaKnown RBP16.83■□□□□ 0.29
PCDHA1-201ENST00000378133 LSM12Q3MHD2 195 aaKnown RBP16.83■□□□□ 0.29
PCDHA1-201ENST00000378133 SLC44A4Q53GD3 710 aa16.83■□□□□ 0.29
PCDHA1-201ENST00000378133 CERCAMQ5T4B2 595 aa16.83■□□□□ 0.29
PCDHA1-201ENST00000378133 FASTKD5Q7L8L6 764 aaKnown RBP16.83■□□□□ 0.29
PCDHA1-201ENST00000378133 TMEM135Q86UB9 458 aa16.83■□□□□ 0.29
PCDHA1-201ENST00000378133 OSTM1Q86WC4 334 aa16.83■□□□□ 0.29
PCDHA1-201ENST00000378133 GRIN3AQ8TCU5 1115 aa16.83■□□□□ 0.29
PCDHA1-201ENST00000378133 SLC35B4Q969S0 331 aa16.83■□□□□ 0.29
PCDHA1-201ENST00000378133 NT5C3BQ969T7 300 aa16.83■□□□□ 0.29
PCDHA1-201ENST00000378133 BIRC8Q96P09 236 aa16.83■□□□□ 0.29
PCDHA1-201ENST00000378133 ILKAPQ9H0C8 392 aaPredicted RBP16.83■□□□□ 0.29
PCDHA1-201ENST00000378133 PLGRKTQ9HBL7 147 aa16.83■□□□□ 0.29
PCDHA1-201ENST00000378133 LRRC4Q9HBW1 653 aa16.83■□□□□ 0.29
PCDHA1-201ENST00000378133 ANLNQ9NQW6 1124 aa16.83■□□□□ 0.29
PCDHA1-201ENST00000378133 GDAP2Q9NXN4 497 aa16.83■□□□□ 0.29
PCDHA1-201ENST00000378133 SH3PXD2BA1X283 911 aa16.83■□□□□ 0.28
PCDHA1-201ENST00000378133 GOLGA8TH3BQL2 631 aa16.83■□□□□ 0.28
PCDHA1-201ENST00000378133 ZBTB24O43167 697 aaPredicted RBP16.83■□□□□ 0.28
PCDHA1-201ENST00000378133 HUS1O60921 280 aa16.83■□□□□ 0.28
PCDHA1-201ENST00000378133 CD4P01730 458 aa16.83■□□□□ 0.28
PCDHA1-201ENST00000378133 LTFP02788 710 aa16.83■□□□□ 0.28
PCDHA1-201ENST00000378133 MAGEA12P43365 314 aa16.83■□□□□ 0.28
PCDHA1-201ENST00000378133 ALDH3B2P48448 385 aa16.83■□□□□ 0.28
PCDHA1-201ENST00000378133 PPIL2Q13356 520 aa16.83■□□□□ 0.28
PCDHA1-201ENST00000378133 SREK1Q8WXA9 508 aaKnown RBP16.83■□□□□ 0.28
PCDHA1-201ENST00000378133 EMID1Q96A84 441 aaPredicted RBP16.83■□□□□ 0.28
PCDHA1-201ENST00000378133 CDCA5Q96FF9 252 aa16.83■□□□□ 0.28
PCDHA1-201ENST00000378133 TNIP3Q96KP6 325 aa16.83■□□□□ 0.28
PCDHA1-201ENST00000378133 SEMA6AQ9H2E6 1030 aa16.83■□□□□ 0.28
PCDHA1-201ENST00000378133 AP2A1O95782 977 aa16.83■□□□□ 0.28
PCDHA1-201ENST00000378133 C2P06681 752 aa16.83■□□□□ 0.28
PCDHA1-201ENST00000378133 TPH1P17752 444 aa16.83■□□□□ 0.28
PCDHA1-201ENST00000378133 DPP6P42658 865 aa16.83■□□□□ 0.28
PCDHA1-201ENST00000378133 TAF6P49848 677 aa16.83■□□□□ 0.28
PCDHA1-201ENST00000378133 PGGT1BP53609 377 aa16.83■□□□□ 0.28
PCDHA1-201ENST00000378133 IL23RQ5VWK5 629 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms