RNA–Protein interactions for RNA: ENST00000376854.5

C9orf40-201, Transcript of chromosome 9 open reading frame 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf40, Length 2,327 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40-201ENST00000376854 CPSF7Q8N684 471 aaKnown RBP25.67■■□□□ 1.7
C9orf40-201ENST00000376854 RNF34Q969K3 372 aa25.67■■□□□ 1.7
C9orf40-201ENST00000376854 CDYLQ9Y232 598 aa25.67■■□□□ 1.7
C9orf40-201ENST00000376854 PCID2Q5JVF3 399 aa25.66■■□□□ 1.7
C9orf40-201ENST00000376854 PM20D1Q6GTS8 502 aa25.66■■□□□ 1.7
C9orf40-201ENST00000376854 PKN3Q6P5Z2 889 aa25.66■■□□□ 1.7
C9orf40-201ENST00000376854 DCLRE1AQ6PJP8 1040 aa25.66■■□□□ 1.7
C9orf40-201ENST00000376854 TMEM86AQ8N2M4 240 aa25.66■■□□□ 1.7
C9orf40-201ENST00000376854 ICA1LQ8NDH6 482 aa25.66■■□□□ 1.7
C9orf40-201ENST00000376854 RHOBTB2Q9BYZ6 727 aa25.66■■□□□ 1.7
C9orf40-201ENST00000376854 VTI1BQ9UEU0 232 aa25.66■■□□□ 1.7
C9orf40-201ENST00000376854 IQCA1LA6NCM1 817 aa25.66■■□□□ 1.7
C9orf40-201ENST00000376854 DFFAO00273 331 aa25.66■■□□□ 1.7
C9orf40-201ENST00000376854 SRGAP2BP0DMP2 458 aa25.66■■□□□ 1.7
C9orf40-201ENST00000376854 COG7P83436 770 aa25.66■■□□□ 1.7
C9orf40-201ENST00000376854 NXNQ6DKJ4 435 aa25.66■■□□□ 1.7
C9orf40-201ENST00000376854 LRRC8EQ6NSJ5 796 aa25.66■■□□□ 1.7
C9orf40-201ENST00000376854 RWDD4Q6NW29 188 aaKnown RBP25.66■■□□□ 1.7
C9orf40-201ENST00000376854 TAC4Q86UU9 113 aa25.66■■□□□ 1.7
C9orf40-201ENST00000376854 ZFAND2BQ8WV99 257 aa25.66■■□□□ 1.7
C9orf40-201ENST00000376854 CATSPER2Q96P56 530 aa25.66■■□□□ 1.7
C9orf40-201ENST00000376854 CDRT15Q96T59 188 aa25.66■■□□□ 1.7
C9orf40-201ENST00000376854 TBL1YQ9BQ87 522 aa25.66■■□□□ 1.7
C9orf40-201ENST00000376854 PSMD13Q9UNM6 376 aa25.66■■□□□ 1.7
C9orf40-201ENST00000376854 INPP5FQ9Y2H2 1132 aa25.66■■□□□ 1.7
C9orf40-201ENST00000376854 ACOT9Q9Y305 439 aa25.66■■□□□ 1.7
C9orf40-201ENST00000376854 AAR2Q9Y312 384 aaKnown RBP25.66■■□□□ 1.7
C9orf40-201ENST00000376854 PTCH2Q9Y6C5 1203 aa25.66■■□□□ 1.7
C9orf40-201ENST00000376854 SLCO1B7G3V0H7 640 aa25.65■■□□□ 1.7
C9orf40-201ENST00000376854 HAS3O00219 553 aa25.65■■□□□ 1.7
C9orf40-201ENST00000376854 SLC22A2O15244 555 aa25.65■■□□□ 1.7
C9orf40-201ENST00000376854 POU6F1Q14863 301 aa25.65■■□□□ 1.7
C9orf40-201ENST00000376854 UGP2Q16851 508 aa25.65■■□□□ 1.7
C9orf40-201ENST00000376854 OGFRL1Q5TC84 451 aaPredicted RBP25.65■■□□□ 1.7
C9orf40-201ENST00000376854 TMEM198Q66K66 360 aa25.65■■□□□ 1.7
C9orf40-201ENST00000376854 BNC2Q6ZN30 1099 aaPredicted RBP25.65■■□□□ 1.7
C9orf40-201ENST00000376854 ARHGAP36Q6ZRI8 547 aa25.65■■□□□ 1.7
C9orf40-201ENST00000376854 SDCCAG8Q86SQ7 713 aaPredicted RBP25.65■■□□□ 1.7
C9orf40-201ENST00000376854 SETD3Q86TU7 594 aaPredicted RBP25.65■■□□□ 1.7
C9orf40-201ENST00000376854 DENND6AQ8IWF6 608 aa25.65■■□□□ 1.7
C9orf40-201ENST00000376854 LSMEM2Q8N112 164 aa25.65■■□□□ 1.7
C9orf40-201ENST00000376854 ARHGAP18Q8N392 663 aa25.65■■□□□ 1.7
C9orf40-201ENST00000376854 RCN3Q96D15 328 aa25.65■■□□□ 1.7
C9orf40-201ENST00000376854 SMARCD1Q96GM5 515 aa25.65■■□□□ 1.7
C9orf40-201ENST00000376854 CENPKQ9BS16 269 aa25.65■■□□□ 1.7
C9orf40-201ENST00000376854 TRIM4Q9C037 500 aa25.65■■□□□ 1.7
C9orf40-201ENST00000376854 ZNF385DQ9H6B1 395 aa25.65■■□□□ 1.7
C9orf40-201ENST00000376854 SLC38A7Q9NVC3 462 aa25.65■■□□□ 1.7
C9orf40-201ENST00000376854 XPR1Q9UBH6 696 aa25.65■■□□□ 1.7
C9orf40-201ENST00000376854 TARM1B6A8C7 271 aa25.65■■□□□ 1.7
C9orf40-201ENST00000376854 DLX3O60479 287 aa25.65■■□□□ 1.7
C9orf40-201ENST00000376854 COL6A2P12110 1019 aa25.65■■□□□ 1.7
C9orf40-201ENST00000376854 ALDH1A3P47895 512 aa25.65■■□□□ 1.7
C9orf40-201ENST00000376854 CLCNKBP51801 687 aa25.65■■□□□ 1.7
C9orf40-201ENST00000376854 MPP1Q00013 466 aa25.65■■□□□ 1.7
C9orf40-201ENST00000376854 CTBP1Q13363 440 aa25.65■■□□□ 1.7
C9orf40-201ENST00000376854 ZNF460Q14592 562 aa25.65■■□□□ 1.7
C9orf40-201ENST00000376854 LIN52Q52LA3 116 aa25.65■■□□□ 1.7
C9orf40-201ENST00000376854 MORN1Q5T089 497 aa25.65■■□□□ 1.7
C9orf40-201ENST00000376854 RASIP1Q5U651 963 aa25.65■■□□□ 1.7
C9orf40-201ENST00000376854 PQLC1Q8N2U9 271 aa25.65■■□□□ 1.7
C9orf40-201ENST00000376854 TSGA13Q96PP4 275 aa25.65■■□□□ 1.7
C9orf40-201ENST00000376854 C6orf203Q9P0P8 240 aaPredicted RBP25.65■■□□□ 1.7
C9orf40-201ENST00000376854 CDH9Q9ULB4 789 aa25.65■■□□□ 1.7
C9orf40-201ENST00000376854 TXNDC9O14530 226 aa25.64■■□□□ 1.7
C9orf40-201ENST00000376854 CACNG3O60359 315 aa25.64■■□□□ 1.7
C9orf40-201ENST00000376854 VAPBO95292 243 aa25.64■■□□□ 1.7
C9orf40-201ENST00000376854 MT-CYBP00156 380 aaPredicted RBP25.64■■□□□ 1.7
C9orf40-201ENST00000376854 PIM1P11309 404 aaPredicted RBP25.64■■□□□ 1.7
C9orf40-201ENST00000376854 THOP1P52888 689 aa25.64■■□□□ 1.7
C9orf40-201ENST00000376854 NSUN2Q08J23 767 aaKnown RBP eCLIP25.64■■□□□ 1.7
C9orf40-201ENST00000376854 DTNAQ9Y4J8 743 aa25.64■■□□□ 1.7
C9orf40-201ENST00000376854 JUNP05412 331 aaKnown RBP25.64■■□□□ 1.69
C9orf40-201ENST00000376854 RAB10P61026 200 aa25.64■■□□□ 1.69
C9orf40-201ENST00000376854 RPL26P61254 145 aaKnown RBP25.64■■□□□ 1.69
C9orf40-201ENST00000376854 PDK3Q15120 406 aa25.64■■□□□ 1.69
C9orf40-201ENST00000376854 PDCD2Q16342 344 aaPredicted RBP25.64■■□□□ 1.69
C9orf40-201ENST00000376854 CNTN4Q8IWV2 1026 aa25.64■■□□□ 1.69
C9orf40-201ENST00000376854 KLHDC8BQ8IXV7 354 aa25.64■■□□□ 1.69
C9orf40-201ENST00000376854 IPMKQ8NFU5 416 aa25.64■■□□□ 1.69
C9orf40-201ENST00000376854 BTBD9Q96Q07 612 aa25.64■■□□□ 1.69
C9orf40-201ENST00000376854 ZNF236Q9UL36 1845 aa25.63■■□□□ 1.69
C9orf40-201ENST00000376854 ADSLP30566 484 aaPredicted RBP25.63■■□□□ 1.69
C9orf40-201ENST00000376854 AFF1P51825 1210 aaKnown RBP25.63■■□□□ 1.69
C9orf40-201ENST00000376854 MAP2K5Q13163 448 aa25.63■■□□□ 1.69
C9orf40-201ENST00000376854 FLOT2Q14254 428 aa25.63■■□□□ 1.69
C9orf40-201ENST00000376854 GRM2Q14416 872 aa25.63■■□□□ 1.69
C9orf40-201ENST00000376854 ZNF423Q2M1K9 1284 aa25.63■■□□□ 1.69
C9orf40-201ENST00000376854 CEP97Q8IW35 865 aa25.63■■□□□ 1.69
C9orf40-201ENST00000376854 SPATA6LQ8N4H0 392 aa25.63■■□□□ 1.69
C9orf40-201ENST00000376854 NXNL1Q96CM4 212 aa25.63■■□□□ 1.69
C9orf40-201ENST00000376854 MARK4Q96L34 752 aa25.63■■□□□ 1.69
C9orf40-201ENST00000376854 FTHL17Q9BXU8 183 aa25.63■■□□□ 1.69
C9orf40-201ENST00000376854 NUP205Q92621 2012 aa25.63■■□□□ 1.69
C9orf40-201ENST00000376854 FAM95CA0A1B0GW59 222 aa25.63■■□□□ 1.69
C9orf40-201ENST00000376854 C17orf102A2RUQ5 167 aa25.63■■□□□ 1.69
C9orf40-201ENST00000376854 CAPN8A6NHC0 703 aa25.63■■□□□ 1.69
C9orf40-201ENST00000376854 CFLARO15519 480 aa25.63■■□□□ 1.69
C9orf40-201ENST00000376854 STMN1P16949 149 aa25.63■■□□□ 1.69
C9orf40-201ENST00000376854 DNAJB1P25685 340 aa25.63■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms