RNA–Protein interactions for RNA: ENST00000376492.3

CLCN6-205, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 1 (best)

Gene CLCN6, Length 1,062 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-205ENST00000376492 OR6B2Q6IFH4 312 aa13.43□□□□□ -0.26
CLCN6-205ENST00000376492 BEND5Q7L4P6 421 aa13.43□□□□□ -0.26
CLCN6-205ENST00000376492 LUZP1Q86V48 1076 aa13.43□□□□□ -0.26
CLCN6-205ENST00000376492 HORMAD1Q86X24 394 aa13.43□□□□□ -0.26
CLCN6-205ENST00000376492 SH2D3CQ8N5H7 860 aa13.43□□□□□ -0.26
CLCN6-205ENST00000376492 ATP6V0D2Q8N8Y2 350 aa13.43□□□□□ -0.26
CLCN6-205ENST00000376492 IFI44Q8TCB0 444 aa13.43□□□□□ -0.26
CLCN6-205ENST00000376492 ABCG4Q9H172 646 aa13.43□□□□□ -0.26
CLCN6-205ENST00000376492 CLMPQ9H6B4 373 aa13.43□□□□□ -0.26
CLCN6-205ENST00000376492 POPDC2Q9HBU9 364 aa13.43□□□□□ -0.26
CLCN6-205ENST00000376492 RTN4Q9NQC3 1192 aaKnown RBP13.43□□□□□ -0.26
CLCN6-205ENST00000376492 THSD1Q9NS62 852 aa13.43□□□□□ -0.26
CLCN6-205ENST00000376492 DNAJC28Q9NX36 388 aa13.43□□□□□ -0.26
CLCN6-205ENST00000376492 VPS28Q9UK41 221 aa13.43□□□□□ -0.26
CLCN6-205ENST00000376492 ZFR2Q9UPR6 939 aaKnown RBP13.43□□□□□ -0.26
CLCN6-205ENST00000376492 K7ERQ8 282 aa13.42□□□□□ -0.26
CLCN6-205ENST00000376492 CASC3O15234 703 aaKnown RBP13.42□□□□□ -0.26
CLCN6-205ENST00000376492 SNAP91O60641 907 aa13.42□□□□□ -0.26
CLCN6-205ENST00000376492 SRCP12931 536 aa13.42□□□□□ -0.26
CLCN6-205ENST00000376492 TGM2P21980 687 aa13.42□□□□□ -0.26
CLCN6-205ENST00000376492 HNRNPA2B1P22626 353 aaKnown RBP13.42□□□□□ -0.26
CLCN6-205ENST00000376492 CDH5P33151 784 aaPredicted RBP13.42□□□□□ -0.26
CLCN6-205ENST00000376492 YWHAZP63104 245 aaKnown RBP13.42□□□□□ -0.26
CLCN6-205ENST00000376492 AUHQ13825 339 aaKnown RBP13.42□□□□□ -0.26
CLCN6-205ENST00000376492 CDKN3Q16667 212 aa13.42□□□□□ -0.26
CLCN6-205ENST00000376492 ISXQ2M1V0 245 aa13.42□□□□□ -0.26
CLCN6-205ENST00000376492 GUSBP11Q6P575 273 aa13.42□□□□□ -0.26
CLCN6-205ENST00000376492 Q6ZSR6 202 aa13.42□□□□□ -0.26
CLCN6-205ENST00000376492 PTAR1Q7Z6K3 402 aaPredicted RBP13.42□□□□□ -0.26
CLCN6-205ENST00000376492 ABI3BPQ7Z7G0 1075 aa13.42□□□□□ -0.26
CLCN6-205ENST00000376492 NEK11Q8NG66 645 aa13.42□□□□□ -0.26
CLCN6-205ENST00000376492 OR2A12Q8NGT7 310 aa13.42□□□□□ -0.26
CLCN6-205ENST00000376492 SNRNP27Q8WVK2 155 aaKnown RBP13.42□□□□□ -0.26
CLCN6-205ENST00000376492 ATXN7L3BQ96GX2 97 aa13.42□□□□□ -0.26
CLCN6-205ENST00000376492 PPP1R13BQ96KQ4 1090 aa13.42□□□□□ -0.26
CLCN6-205ENST00000376492 TRIM62Q9BVG3 475 aa13.42□□□□□ -0.26
CLCN6-205ENST00000376492 DPH1Q9BZG8 443 aa13.42□□□□□ -0.26
CLCN6-205ENST00000376492 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.42□□□□□ -0.26
CLCN6-205ENST00000376492 DDIT4Q9NX09 232 aa13.42□□□□□ -0.26
CLCN6-205ENST00000376492 VANGL2Q9ULK5 521 aa13.42□□□□□ -0.26
CLCN6-205ENST00000376492 DOCK9Q9BZ29 2069 aa13.41□□□□□ -0.26
CLCN6-205ENST00000376492 SCAMP1O15126 338 aa13.41□□□□□ -0.26
CLCN6-205ENST00000376492 TEX33O43247 280 aa13.41□□□□□ -0.26
CLCN6-205ENST00000376492 CBFA2T2O43439 604 aa13.41□□□□□ -0.26
CLCN6-205ENST00000376492 SLC28A2O43868 658 aa13.41□□□□□ -0.26
CLCN6-205ENST00000376492 TPM3P06753 285 aa13.41□□□□□ -0.26
CLCN6-205ENST00000376492 RRM1P23921 792 aa13.41□□□□□ -0.26
CLCN6-205ENST00000376492 CCR1P32246 355 aa13.41□□□□□ -0.26
CLCN6-205ENST00000376492 CHRNA3P32297 505 aa13.41□□□□□ -0.26
CLCN6-205ENST00000376492 SOX5P35711 763 aa13.41□□□□□ -0.26
CLCN6-205ENST00000376492 OXCT1P55809 520 aa13.41□□□□□ -0.26
CLCN6-205ENST00000376492 SNX16P57768 344 aa13.41□□□□□ -0.26
CLCN6-205ENST00000376492 FGL2Q14314 439 aa13.41□□□□□ -0.26
CLCN6-205ENST00000376492 FILIP1LQ4L180 1135 aa13.41□□□□□ -0.26
CLCN6-205ENST00000376492 NEK5Q6P3R8 708 aa13.41□□□□□ -0.26
CLCN6-205ENST00000376492 CRTC1Q6UUV9 634 aa13.41□□□□□ -0.26
CLCN6-205ENST00000376492 C14orf80Q86SX3 495 aa13.41□□□□□ -0.26
CLCN6-205ENST00000376492 NOP9Q86U38 636 aaKnown RBP13.41□□□□□ -0.26
CLCN6-205ENST00000376492 CHST14Q8NCH0 376 aa13.41□□□□□ -0.26
CLCN6-205ENST00000376492 RNF214Q8ND24 703 aa13.41□□□□□ -0.26
CLCN6-205ENST00000376492 ZNF548Q8NEK5 533 aaPredicted RBP13.41□□□□□ -0.26
CLCN6-205ENST00000376492 GRIN3AQ8TCU5 1115 aa13.41□□□□□ -0.26
CLCN6-205ENST00000376492 RNF34Q969K3 372 aa13.41□□□□□ -0.26
CLCN6-205ENST00000376492 MRFAP1L1Q96HT8 127 aa13.41□□□□□ -0.26
CLCN6-205ENST00000376492 BMFQ96LC9 184 aa13.41□□□□□ -0.26
CLCN6-205ENST00000376492 PCMTD1Q96MG8 357 aaPredicted RBP13.41□□□□□ -0.26
CLCN6-205ENST00000376492 CPXM1Q96SM3 734 aa13.41□□□□□ -0.26
CLCN6-205ENST00000376492 PSMB7Q99436 277 aa13.41□□□□□ -0.26
CLCN6-205ENST00000376492 MUC3BQ9H195 1237 aa13.41□□□□□ -0.26
CLCN6-205ENST00000376492 NLRC4Q9NPP4 1024 aa13.41□□□□□ -0.26
CLCN6-205ENST00000376492 SLC12A6Q9UHW9 1150 aa13.41□□□□□ -0.26
CLCN6-205ENST00000376492 HS3ST2Q9Y278 367 aa13.41□□□□□ -0.26
CLCN6-205ENST00000376492 SSUH2Q9Y2M2 353 aa13.41□□□□□ -0.26
CLCN6-205ENST00000376492 HS3ST4Q9Y661 456 aa13.41□□□□□ -0.26
CLCN6-205ENST00000376492 PIEZO2Q9H5I5 2752 aa13.41□□□□□ -0.26
CLCN6-205ENST00000376492 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.4□□□□□ -0.26
CLCN6-205ENST00000376492 A0A1B0GTH6 734 aa13.4□□□□□ -0.26
CLCN6-205ENST00000376492 CPED1A4D0V7 1026 aa13.4□□□□□ -0.26
CLCN6-205ENST00000376492 POM121BA6NF01 834 aa13.4□□□□□ -0.26
CLCN6-205ENST00000376492 A6NNZ2 444 aa13.4□□□□□ -0.26
CLCN6-205ENST00000376492 RAD51BO15315 384 aa13.4□□□□□ -0.26
CLCN6-205ENST00000376492 SMAD6O43541 496 aaKnown RBP13.4□□□□□ -0.26
CLCN6-205ENST00000376492 LZTS3O60299 673 aaPredicted RBP13.4□□□□□ -0.26
CLCN6-205ENST00000376492 GRAP2O75791 330 aa13.4□□□□□ -0.26
CLCN6-205ENST00000376492 PCDH8O95206 1070 aa13.4□□□□□ -0.26
CLCN6-205ENST00000376492 GLI1P08151 1106 aa13.4□□□□□ -0.26
CLCN6-205ENST00000376492 RBMS1P29558 406 aaKnown RBP13.4□□□□□ -0.26
CLCN6-205ENST00000376492 CDC25BP30305 580 aa13.4□□□□□ -0.26
CLCN6-205ENST00000376492 STAT1P42224 750 aa13.4□□□□□ -0.26
CLCN6-205ENST00000376492 DUSP3P51452 185 aaPredicted RBP13.4□□□□□ -0.26
CLCN6-205ENST00000376492 SKOR1P84550 965 aa13.4□□□□□ -0.26
CLCN6-205ENST00000376492 ZNF177Q13360 481 aaPredicted RBP13.4□□□□□ -0.26
CLCN6-205ENST00000376492 MAPK8IP2Q13387 824 aaPredicted RBP13.4□□□□□ -0.26
CLCN6-205ENST00000376492 FZD2Q14332 565 aa13.4□□□□□ -0.26
CLCN6-205ENST00000376492 NR1I3Q14994 352 aa13.4□□□□□ -0.26
CLCN6-205ENST00000376492 TMEM259Q4ZIN3 620 aa13.4□□□□□ -0.26
CLCN6-205ENST00000376492 LINGO4Q6UY18 593 aa13.4□□□□□ -0.26
CLCN6-205ENST00000376492 EFL1Q7Z2Z2 1120 aaKnown RBP13.4□□□□□ -0.26
CLCN6-205ENST00000376492 ZNF677Q86XU0 584 aa13.4□□□□□ -0.26
CLCN6-205ENST00000376492 PASD1Q8IV76 773 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms