RNA–Protein interactions for RNA: ENST00000376237.8

HLA-C-202, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,538 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-202ENST00000376237 COL4A2P08572 1712 aa23.28■■□□□ 1.32
HLA-C-202ENST00000376237 GOLGA6CA6NDK9 693 aa23.28■■□□□ 1.32
HLA-C-202ENST00000376237 GOLGA6BA6NDN3 693 aa23.28■■□□□ 1.32
HLA-C-202ENST00000376237 K7ERQ8 282 aa23.28■■□□□ 1.32
HLA-C-202ENST00000376237 SMAD6O43541 496 aaKnown RBP23.28■■□□□ 1.32
HLA-C-202ENST00000376237 METTL18O95568 372 aa23.28■■□□□ 1.32
HLA-C-202ENST00000376237 GOLGA6DP0CG33 693 aa23.28■■□□□ 1.32
HLA-C-202ENST00000376237 ITIH2P19823 946 aa23.28■■□□□ 1.32
HLA-C-202ENST00000376237 NFKB1P19838 968 aa23.28■■□□□ 1.32
HLA-C-202ENST00000376237 IVDP26440 423 aa23.28■■□□□ 1.32
HLA-C-202ENST00000376237 STK19P49842 368 aaPredicted RBP23.28■■□□□ 1.32
HLA-C-202ENST00000376237 GUCY2DQ02846 1103 aa23.28■■□□□ 1.32
HLA-C-202ENST00000376237 PRKCQQ04759 706 aa23.28■■□□□ 1.32
HLA-C-202ENST00000376237 ITKQ08881 620 aa23.28■■□□□ 1.32
HLA-C-202ENST00000376237 PTPRNQ16849 979 aa23.28■■□□□ 1.32
HLA-C-202ENST00000376237 RALGPS1Q5JS13 557 aa23.28■■□□□ 1.32
HLA-C-202ENST00000376237 RNF135Q8IUD6 432 aa23.28■■□□□ 1.32
HLA-C-202ENST00000376237 PLPP6Q8IY26 295 aa23.28■■□□□ 1.32
HLA-C-202ENST00000376237 IFT20Q8IY31 132 aa23.28■■□□□ 1.32
HLA-C-202ENST00000376237 UBALD2Q8IYN6 164 aa23.28■■□□□ 1.32
HLA-C-202ENST00000376237 PCDH20Q8N6Y1 951 aaKnown RBP23.28■■□□□ 1.32
HLA-C-202ENST00000376237 KCNV2Q8TDN2 545 aa23.28■■□□□ 1.32
HLA-C-202ENST00000376237 CYB5D2Q8WUJ1 264 aa23.28■■□□□ 1.32
HLA-C-202ENST00000376237 SNF8Q96H20 258 aa23.28■■□□□ 1.32
HLA-C-202ENST00000376237 EPB41L5Q9HCM4 733 aa23.28■■□□□ 1.32
HLA-C-202ENST00000376237 GOLGA6AQ9NYA3 693 aa23.28■■□□□ 1.32
HLA-C-202ENST00000376237 WNT16Q9UBV4 365 aa23.28■■□□□ 1.32
HLA-C-202ENST00000376237 SLCO3A1Q9UIG8 710 aa23.28■■□□□ 1.32
HLA-C-202ENST00000376237 AAR2Q9Y312 384 aaKnown RBP23.28■■□□□ 1.32
HLA-C-202ENST00000376237 FCF1Q9Y324 198 aaKnown RBP23.28■■□□□ 1.32
HLA-C-202ENST00000376237 KIAA1549LQ6ZVL6 1849 aa23.27■■□□□ 1.32
HLA-C-202ENST00000376237 BHMG1C9JSJ3 638 aaPredicted RBP23.27■■□□□ 1.32
HLA-C-202ENST00000376237 CSNK1DP48730 415 aa23.27■■□□□ 1.32
HLA-C-202ENST00000376237 DLG2Q15700 870 aa23.27■■□□□ 1.32
HLA-C-202ENST00000376237 MLF2Q15773 248 aaPredicted RBP23.27■■□□□ 1.32
HLA-C-202ENST00000376237 ERCC6LQ2NKX8 1250 aa23.27■■□□□ 1.32
HLA-C-202ENST00000376237 ACCSLQ4AC99 568 aa23.27■■□□□ 1.32
HLA-C-202ENST00000376237 PGBD5Q8N414 524 aa23.27■■□□□ 1.32
HLA-C-202ENST00000376237 SORCS1Q8WY21 1168 aa23.27■■□□□ 1.32
HLA-C-202ENST00000376237 FAM3CQ92520 227 aa23.27■■□□□ 1.32
HLA-C-202ENST00000376237 TRIM31Q9BZY9 425 aa23.27■■□□□ 1.32
HLA-C-202ENST00000376237 ETNK1Q9HBU6 452 aa23.27■■□□□ 1.32
HLA-C-202ENST00000376237 FAM114A2Q9NRY5 505 aa23.27■■□□□ 1.32
HLA-C-202ENST00000376237 WHRNQ9P202 907 aa23.27■■□□□ 1.32
HLA-C-202ENST00000376237 LHX3Q9UBR4 397 aa23.27■■□□□ 1.32
HLA-C-202ENST00000376237 TPX2Q9ULW0 747 aaKnown RBP23.27■■□□□ 1.32
HLA-C-202ENST00000376237 SMAPO00193 183 aa23.26■■□□□ 1.31
HLA-C-202ENST00000376237 DNALI1O14645 258 aaPredicted RBP23.26■■□□□ 1.31
HLA-C-202ENST00000376237 PSMD3O43242 534 aa23.26■■□□□ 1.31
HLA-C-202ENST00000376237 ANXA9O76027 345 aa23.26■■□□□ 1.31
HLA-C-202ENST00000376237 HNRNPLP14866 589 aaKnown RBP eCLIP23.26■■□□□ 1.31
HLA-C-202ENST00000376237 MAPK8P45983 427 aa23.26■■□□□ 1.31
HLA-C-202ENST00000376237 MAXP61244 160 aa23.26■■□□□ 1.31
HLA-C-202ENST00000376237 SNRPD1P62314 119 aaKnown RBP23.26■■□□□ 1.31
HLA-C-202ENST00000376237 BASP1P80723 227 aaKnown RBP23.26■■□□□ 1.31
HLA-C-202ENST00000376237 CALCOCO2Q13137 446 aa23.26■■□□□ 1.31
HLA-C-202ENST00000376237 SEMA5AQ13591 1074 aa23.26■■□□□ 1.31
HLA-C-202ENST00000376237 PON2Q15165 354 aa23.26■■□□□ 1.31
HLA-C-202ENST00000376237 C22orf39Q6P5X5 142 aa23.26■■□□□ 1.31
HLA-C-202ENST00000376237 TPRG1Q6ZUI0 275 aa23.26■■□□□ 1.31
HLA-C-202ENST00000376237 GJD3Q8N144 294 aa23.26■■□□□ 1.31
HLA-C-202ENST00000376237 GPR161Q8N6U8 529 aaKnown RBP23.26■■□□□ 1.31
HLA-C-202ENST00000376237 MYRIPQ8NFW9 859 aa23.26■■□□□ 1.31
HLA-C-202ENST00000376237 IMP4Q96G21 291 aaKnown RBP23.26■■□□□ 1.31
HLA-C-202ENST00000376237 MYO19Q96H55 970 aa23.26■■□□□ 1.31
HLA-C-202ENST00000376237 NUDCD1Q96RS6 583 aa23.26■■□□□ 1.31
HLA-C-202ENST00000376237 VPS45Q9NRW7 570 aa23.26■■□□□ 1.31
HLA-C-202ENST00000376237 THAP10Q9P2Z0 257 aaPredicted RBP23.26■■□□□ 1.31
HLA-C-202ENST00000376237 SNX24Q9Y343 169 aa23.26■■□□□ 1.31
HLA-C-202ENST00000376237 MYO10Q9HD67 2058 aa23.26■■□□□ 1.31
HLA-C-202ENST00000376237 SHROOM3Q8TF72 1996 aa23.25■■□□□ 1.31
HLA-C-202ENST00000376237 ERI2A8K979 691 aaKnown RBP23.25■■□□□ 1.31
HLA-C-202ENST00000376237 MUSKO15146 869 aa23.25■■□□□ 1.31
HLA-C-202ENST00000376237 TUBBP07437 444 aa23.25■■□□□ 1.31
HLA-C-202ENST00000376237 CR2P20023 1033 aa23.25■■□□□ 1.31
HLA-C-202ENST00000376237 PSMB4P28070 264 aa23.25■■□□□ 1.31
HLA-C-202ENST00000376237 RPL21P46778 160 aaKnown RBP23.25■■□□□ 1.31
HLA-C-202ENST00000376237 SLC14A2Q15849 920 aa23.25■■□□□ 1.31
HLA-C-202ENST00000376237 FBXO43Q4G163 708 aa23.25■■□□□ 1.31
HLA-C-202ENST00000376237 DGKKQ5KSL6 1271 aa23.25■■□□□ 1.31
HLA-C-202ENST00000376237 KLHDC8BQ8IXV7 354 aa23.25■■□□□ 1.31
HLA-C-202ENST00000376237 OR2AP1Q8NGE2 309 aa23.25■■□□□ 1.31
HLA-C-202ENST00000376237 SHDQ96IW2 340 aa23.25■■□□□ 1.31
HLA-C-202ENST00000376237 SEMA3CQ99985 751 aa23.25■■□□□ 1.31
HLA-C-202ENST00000376237 FAM129AQ9BZQ8 928 aa23.25■■□□□ 1.31
HLA-C-202ENST00000376237 DPH5Q9H2P9 285 aa23.25■■□□□ 1.31
HLA-C-202ENST00000376237 GDF3Q9NR23 364 aa23.25■■□□□ 1.31
HLA-C-202ENST00000376237 E7EVH7 732 aa23.24■■□□□ 1.31
HLA-C-202ENST00000376237 K7EQS6 105 aa23.24■■□□□ 1.31
HLA-C-202ENST00000376237 SEC31AO94979 1220 aaKnown RBP23.24■■□□□ 1.31
HLA-C-202ENST00000376237 IGSF6O95976 241 aa23.24■■□□□ 1.31
HLA-C-202ENST00000376237 GSRP00390 522 aa23.24■■□□□ 1.31
HLA-C-202ENST00000376237 CDK16Q00536 496 aa23.24■■□□□ 1.31
HLA-C-202ENST00000376237 ZNF234Q14588 700 aa23.24■■□□□ 1.31
HLA-C-202ENST00000376237 FNDC3BQ53EP0 1204 aaKnown RBP23.24■■□□□ 1.31
HLA-C-202ENST00000376237 IER5LQ5T953 404 aa23.24■■□□□ 1.31
HLA-C-202ENST00000376237 ZNF852Q6ZMS4 543 aa23.24■■□□□ 1.31
HLA-C-202ENST00000376237 PPIL6Q8IXY8 311 aa23.24■■□□□ 1.31
HLA-C-202ENST00000376237 ARRDC2Q8TBH0 407 aa23.24■■□□□ 1.31
HLA-C-202ENST00000376237 FRS2Q8WU20 508 aa23.24■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms