RNA–Protein interactions for RNA: ENST00000375703.7

MSH5-201, Transcript of mutS homolog 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSH5, Length 2,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-201ENST00000375703 COL6A2P12110 1019 aa14.76□□□□□ -0.05
MSH5-201ENST00000375703 ADSLP30566 484 aaPredicted RBP14.76□□□□□ -0.05
MSH5-201ENST00000375703 MSX2P35548 267 aaPredicted RBP14.76□□□□□ -0.05
MSH5-201ENST00000375703 CRYBB1P53674 252 aaPredicted RBP14.76□□□□□ -0.05
MSH5-201ENST00000375703 ADAM17P78536 824 aa14.76□□□□□ -0.05
MSH5-201ENST00000375703 CTBP1Q13363 440 aa14.76□□□□□ -0.05
MSH5-201ENST00000375703 GRM2Q14416 872 aa14.76□□□□□ -0.05
MSH5-201ENST00000375703 RBBP5Q15291 538 aaKnown RBP14.76□□□□□ -0.05
MSH5-201ENST00000375703 ZNF423Q2M1K9 1284 aa14.76□□□□□ -0.05
MSH5-201ENST00000375703 TMEM198Q66K66 360 aa14.76□□□□□ -0.05
MSH5-201ENST00000375703 LRRC8EQ6NSJ5 796 aa14.76□□□□□ -0.05
MSH5-201ENST00000375703 DCLRE1AQ6PJP8 1040 aa14.76□□□□□ -0.05
MSH5-201ENST00000375703 LCA5Q86VQ0 697 aa14.76□□□□□ -0.05
MSH5-201ENST00000375703 LSMEM2Q8N112 164 aa14.76□□□□□ -0.05
MSH5-201ENST00000375703 NPLOC4Q8TAT6 608 aa14.76□□□□□ -0.05
MSH5-201ENST00000375703 PIP4K2CQ8TBX8 421 aa14.76□□□□□ -0.05
MSH5-201ENST00000375703 RNF181Q9P0P0 153 aa14.76□□□□□ -0.05
MSH5-201ENST00000375703 SNUPNO95149 360 aaKnown RBP14.76□□□□□ -0.05
MSH5-201ENST00000375703 VAPBO95292 243 aa14.76□□□□□ -0.05
MSH5-201ENST00000375703 ENO3P13929 434 aaPredicted RBP14.76□□□□□ -0.05
MSH5-201ENST00000375703 CHN2P52757 468 aa14.76□□□□□ -0.05
MSH5-201ENST00000375703 THOP1P52888 689 aa14.76□□□□□ -0.05
MSH5-201ENST00000375703 COG7P83436 770 aa14.76□□□□□ -0.05
MSH5-201ENST00000375703 ART3Q13508 389 aa14.76□□□□□ -0.05
MSH5-201ENST00000375703 FLOT2Q14254 428 aa14.76□□□□□ -0.05
MSH5-201ENST00000375703 GRB14Q14449 540 aa14.76□□□□□ -0.05
MSH5-201ENST00000375703 POU6F1Q14863 301 aa14.76□□□□□ -0.05
MSH5-201ENST00000375703 UGP2Q16851 508 aa14.76□□□□□ -0.05
MSH5-201ENST00000375703 PIGGQ5H8A4 983 aa14.76□□□□□ -0.05
MSH5-201ENST00000375703 PM20D1Q6GTS8 502 aa14.76□□□□□ -0.05
MSH5-201ENST00000375703 RWDD4Q6NW29 188 aaKnown RBP14.76□□□□□ -0.05
MSH5-201ENST00000375703 DENND6AQ8IWF6 608 aa14.76□□□□□ -0.05
MSH5-201ENST00000375703 CENPLQ8N0S6 344 aaPredicted RBP14.76□□□□□ -0.05
MSH5-201ENST00000375703 CCNYL1Q8N7R7 359 aa14.76□□□□□ -0.05
MSH5-201ENST00000375703 DPF3Q92784 378 aa14.76□□□□□ -0.05
MSH5-201ENST00000375703 NXNL1Q96CM4 212 aa14.76□□□□□ -0.05
MSH5-201ENST00000375703 BCAP29Q9UHQ4 241 aa14.76□□□□□ -0.05
MSH5-201ENST00000375703 TARM1B6A8C7 271 aa14.75□□□□□ -0.05
MSH5-201ENST00000375703 DFFAO00273 331 aa14.75□□□□□ -0.05
MSH5-201ENST00000375703 MT-CYBP00156 380 aaPredicted RBP14.75□□□□□ -0.05
MSH5-201ENST00000375703 XRCC1P18887 633 aaPredicted RBP14.75□□□□□ -0.05
MSH5-201ENST00000375703 PKNOX1P55347 436 aa14.75□□□□□ -0.05
MSH5-201ENST00000375703 RAB10P61026 200 aa14.75□□□□□ -0.05
MSH5-201ENST00000375703 BIRC2Q13490 618 aa14.75□□□□□ -0.05
MSH5-201ENST00000375703 ZNF460Q14592 562 aa14.75□□□□□ -0.05
MSH5-201ENST00000375703 PDCD2Q16342 344 aaPredicted RBP14.75□□□□□ -0.05
MSH5-201ENST00000375703 FBXL19Q6PCT2 694 aa14.75□□□□□ -0.05
MSH5-201ENST00000375703 TMEM86AQ8N2M4 240 aa14.75□□□□□ -0.05
MSH5-201ENST00000375703 SPATA6LQ8N4H0 392 aa14.75□□□□□ -0.05
MSH5-201ENST00000375703 LRGUKQ96M69 825 aa14.75□□□□□ -0.05
MSH5-201ENST00000375703 OMDQ99983 421 aa14.75□□□□□ -0.05
MSH5-201ENST00000375703 TBL1YQ9BQ87 522 aa14.75□□□□□ -0.05
MSH5-201ENST00000375703 EFCAB1Q9HAE3 211 aa14.75□□□□□ -0.05
MSH5-201ENST00000375703 XPR1Q9UBH6 696 aa14.75□□□□□ -0.05
MSH5-201ENST00000375703 VPS28Q9UK41 221 aa14.75□□□□□ -0.05
MSH5-201ENST00000375703 TBC1D30Q9Y2I9 924 aa14.75□□□□□ -0.05
MSH5-201ENST00000375703 TSC2P49815 1807 aa14.75□□□□□ -0.05
MSH5-201ENST00000375703 HHLA1C9JL84 531 aa14.75□□□□□ -0.05
MSH5-201ENST00000375703 JUNP05412 331 aaKnown RBP14.75□□□□□ -0.05
MSH5-201ENST00000375703 STMN1P16949 149 aa14.75□□□□□ -0.05
MSH5-201ENST00000375703 MRPS22P82650 360 aaKnown RBP14.75□□□□□ -0.05
MSH5-201ENST00000375703 MPP1Q00013 466 aa14.75□□□□□ -0.05
MSH5-201ENST00000375703 AP1ARQ63HQ0 302 aa14.75□□□□□ -0.05
MSH5-201ENST00000375703 ESRP1Q6NXG1 681 aaKnown RBP14.75□□□□□ -0.05
MSH5-201ENST00000375703 CEP97Q8IW35 865 aa14.75□□□□□ -0.05
MSH5-201ENST00000375703 USP13Q92995 863 aaPredicted RBP14.75□□□□□ -0.05
MSH5-201ENST00000375703 DCUN1D1Q96GG9 259 aa14.75□□□□□ -0.05
MSH5-201ENST00000375703 MARK4Q96L34 752 aa14.75□□□□□ -0.05
MSH5-201ENST00000375703 TSGA13Q96PP4 275 aa14.75□□□□□ -0.05
MSH5-201ENST00000375703 FTHL17Q9BXU8 183 aa14.75□□□□□ -0.05
MSH5-201ENST00000375703 SIK2Q9H0K1 926 aa14.75□□□□□ -0.05
MSH5-201ENST00000375703 ZNF385DQ9H6B1 395 aa14.75□□□□□ -0.05
MSH5-201ENST00000375703 MEIS3P2A8K0S8 358 aa14.74□□□□□ -0.05
MSH5-201ENST00000375703 CACNG3O60359 315 aa14.74□□□□□ -0.05
MSH5-201ENST00000375703 CCNCP24863 283 aa14.74□□□□□ -0.05
MSH5-201ENST00000375703 DNAJB1P25685 340 aa14.74□□□□□ -0.05
MSH5-201ENST00000375703 PSEN2P49810 448 aa14.74□□□□□ -0.05
MSH5-201ENST00000375703 UGT2A3Q6UWM9 527 aa14.74□□□□□ -0.05
MSH5-201ENST00000375703 ARHGAP36Q6ZRI8 547 aa14.74□□□□□ -0.05
MSH5-201ENST00000375703 BHLHA9Q7RTU4 235 aa14.74□□□□□ -0.05
MSH5-201ENST00000375703 PGAM4Q8N0Y7 254 aa14.74□□□□□ -0.05
MSH5-201ENST00000375703 RNF148Q8N7C7 305 aa14.74□□□□□ -0.05
MSH5-201ENST00000375703 IPMKQ8NFU5 416 aa14.74□□□□□ -0.05
MSH5-201ENST00000375703 UNKQ9C0B0 810 aaKnown RBP14.74□□□□□ -0.05
MSH5-201ENST00000375703 WDR41Q9HAD4 459 aa14.74□□□□□ -0.05
MSH5-201ENST00000375703 ZBTB26Q9HCK0 441 aa14.74□□□□□ -0.05
MSH5-201ENST00000375703 PLXNB2O15031 1838 aa14.74□□□□□ -0.05
MSH5-201ENST00000375703 FAM95CA0A1B0GW59 222 aa14.74□□□□□ -0.05
MSH5-201ENST00000375703 PGK1P00558 417 aa14.74□□□□□ -0.05
MSH5-201ENST00000375703 POLD2P49005 469 aa14.74□□□□□ -0.05
MSH5-201ENST00000375703 CLCNKBP51801 687 aa14.74□□□□□ -0.05
MSH5-201ENST00000375703 MS4A2Q01362 244 aa14.74□□□□□ -0.05
MSH5-201ENST00000375703 CEACAM7Q14002 265 aa14.74□□□□□ -0.05
MSH5-201ENST00000375703 ZFP1Q6P2D0 407 aa14.74□□□□□ -0.05
MSH5-201ENST00000375703 PLEKHH3Q7Z736 793 aa14.74□□□□□ -0.05
MSH5-201ENST00000375703 PDCD6IPQ8WUM4 868 aaKnown RBP14.74□□□□□ -0.05
MSH5-201ENST00000375703 GPR78Q96P69 363 aa14.74□□□□□ -0.05
MSH5-201ENST00000375703 RHOBTB2Q9BYZ6 727 aa14.74□□□□□ -0.05
MSH5-201ENST00000375703 GNEQ9Y223 722 aaKnown RBP14.74□□□□□ -0.05
MSH5-201ENST00000375703 PTCH2Q9Y6C5 1203 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms