RNA–Protein interactions for RNA: ENST00000375340.10

SMC1A-202, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 1 (best) BASIC

Gene SMC1A, Length 9,930 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-202ENST00000375340 C9orf57Q5W0N0 161 aa6.62□□□□□ -1.35
SMC1A-202ENST00000375340 MOB2Q70IA6 237 aa6.62□□□□□ -1.35
SMC1A-202ENST00000375340 LRTOMTQ8WZ04 291 aa6.62□□□□□ -1.35
SMC1A-202ENST00000375340 WNT8BQ93098 351 aa6.62□□□□□ -1.35
SMC1A-202ENST00000375340 LRRC39Q96DD0 335 aa6.62□□□□□ -1.35
SMC1A-202ENST00000375340 TUBGCP5Q96RT8 1024 aa6.62□□□□□ -1.35
SMC1A-202ENST00000375340 ASB7Q9H672 318 aa6.62□□□□□ -1.35
SMC1A-202ENST00000375340 DMAP1Q9NPF5 467 aaPredicted RBP6.62□□□□□ -1.35
SMC1A-202ENST00000375340 LNPEPQ9UIQ6 1025 aa6.62□□□□□ -1.35
SMC1A-202ENST00000375340 PPM1HQ9ULR3 514 aa6.62□□□□□ -1.35
SMC1A-202ENST00000375340 CCL22O00626 93 aa6.62□□□□□ -1.35
SMC1A-202ENST00000375340 STX7O15400 261 aaKnown RBP6.62□□□□□ -1.35
SMC1A-202ENST00000375340 AMHP03971 560 aa6.62□□□□□ -1.35
SMC1A-202ENST00000375340 SERPINH1P50454 418 aaKnown RBP6.62□□□□□ -1.35
SMC1A-202ENST00000375340 RAD23AP54725 363 aa6.62□□□□□ -1.35
SMC1A-202ENST00000375340 LSM3P62310 102 aaKnown RBP6.62□□□□□ -1.35
SMC1A-202ENST00000375340 ITGADQ13349 1161 aa6.62□□□□□ -1.35
SMC1A-202ENST00000375340 CDH18Q13634 790 aa6.62□□□□□ -1.35
SMC1A-202ENST00000375340 NR1D2Q14995 579 aa6.62□□□□□ -1.35
SMC1A-202ENST00000375340 PRKD1Q15139 912 aaPredicted RBP6.62□□□□□ -1.35
SMC1A-202ENST00000375340 PITRM1Q5JRX3 1037 aa6.62□□□□□ -1.35
SMC1A-202ENST00000375340 PCID2Q5JVF3 399 aa6.62□□□□□ -1.35
SMC1A-202ENST00000375340 ANKRD13AQ8IZ07 590 aa6.62□□□□□ -1.35
SMC1A-202ENST00000375340 OR52K2Q8NGK3 314 aa6.62□□□□□ -1.35
SMC1A-202ENST00000375340 C7orf26Q96N11 449 aa6.62□□□□□ -1.35
SMC1A-202ENST00000375340 MPP6Q9NZW5 540 aa6.62□□□□□ -1.35
SMC1A-202ENST00000375340 ARHGAP28Q9P2N2 729 aa6.62□□□□□ -1.35
SMC1A-202ENST00000375340 CELF2O95319 508 aaKnown RBP6.62□□□□□ -1.35
SMC1A-202ENST00000375340 HIST1H2AGP0C0S8 130 aaPredicted RBP6.62□□□□□ -1.35
SMC1A-202ENST00000375340 HIST1H2ADP20671 130 aa6.62□□□□□ -1.35
SMC1A-202ENST00000375340 GNASQ5JWF2 1037 aa6.62□□□□□ -1.35
SMC1A-202ENST00000375340 BORCS6Q96GS4 357 aa6.62□□□□□ -1.35
SMC1A-202ENST00000375340 HIST1H2AHQ96KK5 128 aa6.62□□□□□ -1.35
SMC1A-202ENST00000375340 ZMAT2Q96NC0 199 aaKnown RBP6.62□□□□□ -1.35
SMC1A-202ENST00000375340 HIST1H2AJQ99878 128 aa6.62□□□□□ -1.35
SMC1A-202ENST00000375340 H2AFJQ9BTM1 129 aa6.62□□□□□ -1.35
SMC1A-202ENST00000375340 ACE2Q9BYF1 805 aaPredicted RBP6.62□□□□□ -1.35
SMC1A-202ENST00000375340 RHOBTB2Q9BYZ6 727 aa6.62□□□□□ -1.35
SMC1A-202ENST00000375340 C6orf203Q9P0P8 240 aaPredicted RBP6.62□□□□□ -1.35
SMC1A-202ENST00000375340 SFMBT1Q9UHJ3 866 aa6.62□□□□□ -1.35
SMC1A-202ENST00000375340 TELO2Q9Y4R8 837 aa6.62□□□□□ -1.35
SMC1A-202ENST00000375340 KIAA1551Q9HCM1 1747 aa6.62□□□□□ -1.35
SMC1A-202ENST00000375340 TP73O15350 636 aa6.62□□□□□ -1.35
SMC1A-202ENST00000375340 ADCY6O43306 1168 aa6.62□□□□□ -1.35
SMC1A-202ENST00000375340 OR1E1P30953 314 aa6.62□□□□□ -1.35
SMC1A-202ENST00000375340 TAF1CQ15572 869 aaPredicted RBP6.62□□□□□ -1.35
SMC1A-202ENST00000375340 MAPRE1Q15691 268 aaKnown RBP6.62□□□□□ -1.35
SMC1A-202ENST00000375340 FAM98BQ52LJ0 330 aaKnown RBP6.62□□□□□ -1.35
SMC1A-202ENST00000375340 SAMD4BQ5PRF9 694 aaKnown RBP6.62□□□□□ -1.35
SMC1A-202ENST00000375340 ILDR2Q71H61 639 aa6.62□□□□□ -1.35
SMC1A-202ENST00000375340 LDB1Q86U70 411 aaPredicted RBP6.62□□□□□ -1.35
SMC1A-202ENST00000375340 TDRPQ86YL5 185 aa6.62□□□□□ -1.35
SMC1A-202ENST00000375340 SPPL2CQ8IUH8 684 aa6.62□□□□□ -1.35
SMC1A-202ENST00000375340 PTGR2Q8N8N7 351 aaPredicted RBP6.62□□□□□ -1.35
SMC1A-202ENST00000375340 PRR11Q96HE9 360 aaPredicted RBP6.62□□□□□ -1.35
SMC1A-202ENST00000375340 HGH1Q9BTY7 390 aa6.62□□□□□ -1.35
SMC1A-202ENST00000375340 ROGDIQ9GZN7 287 aa6.62□□□□□ -1.35
SMC1A-202ENST00000375340 PRDM12Q9H4Q4 367 aa6.62□□□□□ -1.35
SMC1A-202ENST00000375340 MROH8Q9H579 483 aa6.62□□□□□ -1.35
SMC1A-202ENST00000375340 COMMD3-BMI1R4GMX3 469 aa6.62□□□□□ -1.35
SMC1A-202ENST00000375340 PTPRJQ12913 1337 aa6.62□□□□□ -1.35
SMC1A-202ENST00000375340 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP6.62□□□□□ -1.35
SMC1A-202ENST00000375340 FCGR1AP12314 374 aa6.62□□□□□ -1.35
SMC1A-202ENST00000375340 GRIA1P42261 906 aa6.62□□□□□ -1.35
SMC1A-202ENST00000375340 CCT8P50990 548 aa6.62□□□□□ -1.35
SMC1A-202ENST00000375340 ZNF177Q13360 481 aaPredicted RBP6.62□□□□□ -1.35
SMC1A-202ENST00000375340 CTXN3Q4LDR2 81 aa6.62□□□□□ -1.35
SMC1A-202ENST00000375340 PKN3Q6P5Z2 889 aa6.62□□□□□ -1.35
SMC1A-202ENST00000375340 LGI2Q8N0V4 545 aa6.62□□□□□ -1.35
SMC1A-202ENST00000375340 ITFG1Q8TB96 612 aa6.62□□□□□ -1.35
SMC1A-202ENST00000375340 CDK5RAP2Q96SN8 1893 aa6.62□□□□□ -1.35
SMC1A-202ENST00000375340 EBF2Q9HAK2 575 aa6.62□□□□□ -1.35
SMC1A-202ENST00000375340 COL18A1P39060 1754 aa6.62□□□□□ -1.35
SMC1A-202ENST00000375340 PRRG1O14668 218 aa6.62□□□□□ -1.35
SMC1A-202ENST00000375340 ZBTB11O95625 1053 aaPredicted RBP6.62□□□□□ -1.35
SMC1A-202ENST00000375340 SNRPB2P08579 225 aaKnown RBP6.62□□□□□ -1.35
SMC1A-202ENST00000375340 GSTA3Q16772 222 aa6.62□□□□□ -1.35
SMC1A-202ENST00000375340 FAM228AQ86W67 206 aa6.62□□□□□ -1.35
SMC1A-202ENST00000375340 CHRAC1Q9NRG0 131 aa6.62□□□□□ -1.35
SMC1A-202ENST00000375340 DMTF1Q9Y222 760 aa6.62□□□□□ -1.35
SMC1A-202ENST00000375340 RAP2CQ9Y3L5 183 aa6.62□□□□□ -1.35
SMC1A-202ENST00000375340 FAM149AA5PLN7 773 aa6.61□□□□□ -1.35
SMC1A-202ENST00000375340 LYPLA2O95372 231 aa6.61□□□□□ -1.35
SMC1A-202ENST00000375340 VAV1P15498 845 aa6.61□□□□□ -1.35
SMC1A-202ENST00000375340 SP2Q02086 613 aa6.61□□□□□ -1.35
SMC1A-202ENST00000375340 MPP2Q14168 576 aa6.61□□□□□ -1.35
SMC1A-202ENST00000375340 DEPDC1Q5TB30 811 aa6.61□□□□□ -1.35
SMC1A-202ENST00000375340 DET1Q7L5Y6 550 aa6.61□□□□□ -1.35
SMC1A-202ENST00000375340 EFL1Q7Z2Z2 1120 aaKnown RBP6.61□□□□□ -1.35
SMC1A-202ENST00000375340 STK32CQ86UX6 486 aa6.61□□□□□ -1.35
SMC1A-202ENST00000375340 HCRTO43612 131 aa6.61□□□□□ -1.35
SMC1A-202ENST00000375340 CDH2P19022 906 aaPredicted RBP6.61□□□□□ -1.35
SMC1A-202ENST00000375340 TLK2Q86UE8 772 aa6.61□□□□□ -1.35
SMC1A-202ENST00000375340 PIGZQ86VD9 579 aa6.61□□□□□ -1.35
SMC1A-202ENST00000375340 RIOX2Q8IUF8 465 aa6.61□□□□□ -1.35
SMC1A-202ENST00000375340 OR8H2Q8N162 312 aa6.61□□□□□ -1.35
SMC1A-202ENST00000375340 C1orf127Q8N9H9 656 aa6.61□□□□□ -1.35
SMC1A-202ENST00000375340 C9orf16Q9BUW7 83 aa6.61□□□□□ -1.35
SMC1A-202ENST00000375340 BBS2Q9BXC9 721 aa6.61□□□□□ -1.35
SMC1A-202ENST00000375340 CDKN2AIPQ9NXV6 580 aaPredicted RBP6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms