RNA–Protein interactions for RNA: ENST00000374747.9

NPLOC4-202, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2 BASIC

Gene NPLOC4, Length 5,538 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-202ENST00000374747 PDK3Q15120 406 aa12.44□□□□□ -0.42
NPLOC4-202ENST00000374747 MARC1Q5VT66 337 aa12.44□□□□□ -0.42
NPLOC4-202ENST00000374747 PGBD3Q8N328 593 aa12.44□□□□□ -0.42
NPLOC4-202ENST00000374747 ZNF398Q8TD17 642 aa12.44□□□□□ -0.42
NPLOC4-202ENST00000374747 BHMTQ93088 406 aa12.44□□□□□ -0.42
NPLOC4-202ENST00000374747 SMARCD1Q96GM5 515 aa12.44□□□□□ -0.42
NPLOC4-202ENST00000374747 POMKQ9H5K3 350 aa12.44□□□□□ -0.42
NPLOC4-202ENST00000374747 COL20A1Q9P218 1284 aa12.44□□□□□ -0.42
NPLOC4-202ENST00000374747 PQBP1O60828 265 aaKnown RBP12.44□□□□□ -0.42
NPLOC4-202ENST00000374747 ABCB1P08183 1280 aaPredicted RBP12.44□□□□□ -0.42
NPLOC4-202ENST00000374747 TPH1P17752 444 aa12.44□□□□□ -0.42
NPLOC4-202ENST00000374747 CCT3P49368 545 aaKnown RBP12.44□□□□□ -0.42
NPLOC4-202ENST00000374747 MACC1Q6ZN28 852 aa12.44□□□□□ -0.42
NPLOC4-202ENST00000374747 KBTBD2Q8IY47 623 aa12.44□□□□□ -0.42
NPLOC4-202ENST00000374747 FAM71AQ8IYT1 594 aa12.44□□□□□ -0.42
NPLOC4-202ENST00000374747 MREGQ8N565 214 aa12.44□□□□□ -0.42
NPLOC4-202ENST00000374747 PIWIL2Q8TC59 973 aaKnown RBP12.44□□□□□ -0.42
NPLOC4-202ENST00000374747 METTL6Q8TCB7 284 aa12.44□□□□□ -0.42
NPLOC4-202ENST00000374747 YME1L1Q96TA2 773 aa12.44□□□□□ -0.42
NPLOC4-202ENST00000374747 TAS2R13Q9NYV9 303 aa12.44□□□□□ -0.42
NPLOC4-202ENST00000374747 TRPM5Q9NZQ8 1165 aa12.44□□□□□ -0.42
NPLOC4-202ENST00000374747 ZNF624Q9P2J8 865 aaPredicted RBP12.44□□□□□ -0.42
NPLOC4-202ENST00000374747 PCDHB5Q9Y5E4 795 aa12.44□□□□□ -0.42
NPLOC4-202ENST00000374747 HACD1B0YJ81 288 aa12.43□□□□□ -0.42
NPLOC4-202ENST00000374747 SEC22BO75396 215 aa12.43□□□□□ -0.42
NPLOC4-202ENST00000374747 RHOCP08134 193 aa12.43□□□□□ -0.42
NPLOC4-202ENST00000374747 CCR1P32246 355 aa12.43□□□□□ -0.42
NPLOC4-202ENST00000374747 ZACNQ401N2 412 aa12.43□□□□□ -0.42
NPLOC4-202ENST00000374747 KIAA0408Q6ZU52 694 aa12.43□□□□□ -0.42
NPLOC4-202ENST00000374747 KRT77Q7Z794 578 aa12.43□□□□□ -0.42
NPLOC4-202ENST00000374747 ADHFE1Q8IWW8 467 aa12.43□□□□□ -0.42
NPLOC4-202ENST00000374747 ZNF276Q8N554 614 aa12.43□□□□□ -0.42
NPLOC4-202ENST00000374747 OR7A2PQ8NGA2 310 aa12.43□□□□□ -0.42
NPLOC4-202ENST00000374747 MFSD14AQ96MC6 490 aa12.43□□□□□ -0.42
NPLOC4-202ENST00000374747 TBC1D10AQ9BXI6 508 aa12.43□□□□□ -0.42
NPLOC4-202ENST00000374747 CEP41Q9BYV8 373 aa12.43□□□□□ -0.42
NPLOC4-202ENST00000374747 PIGNO95427 931 aa12.43□□□□□ -0.42
NPLOC4-202ENST00000374747 FGFR3P22607 806 aa12.43□□□□□ -0.42
NPLOC4-202ENST00000374747 DNAJB2P25686 324 aa12.43□□□□□ -0.42
NPLOC4-202ENST00000374747 RPL5P46777 297 aaKnown RBP12.43□□□□□ -0.42
NPLOC4-202ENST00000374747 KPNA1P52294 538 aaPredicted RBP12.43□□□□□ -0.42
NPLOC4-202ENST00000374747 CRYBB1P53674 252 aaPredicted RBP12.43□□□□□ -0.42
NPLOC4-202ENST00000374747 ADAM2Q99965 735 aa12.43□□□□□ -0.42
NPLOC4-202ENST00000374747 NIFKQ9BYG3 293 aaKnown RBP12.43□□□□□ -0.42
NPLOC4-202ENST00000374747 PTPRHQ9HD43 1115 aa12.43□□□□□ -0.42
NPLOC4-202ENST00000374747 AHSPQ9NZD4 102 aa12.43□□□□□ -0.42
NPLOC4-202ENST00000374747 SNX8Q9Y5X2 465 aa12.43□□□□□ -0.42
NPLOC4-202ENST00000374747 PRR23AA6NEV1 266 aa12.43□□□□□ -0.42
NPLOC4-202ENST00000374747 H7C0S8 307 aa12.43□□□□□ -0.42
NPLOC4-202ENST00000374747 APOC4-APOC2K7ER74 178 aa12.43□□□□□ -0.42
NPLOC4-202ENST00000374747 STAU1O95793 577 aaKnown RBP12.43□□□□□ -0.42
NPLOC4-202ENST00000374747 APOC2P02655 101 aa12.43□□□□□ -0.42
NPLOC4-202ENST00000374747 SERPINF2P08697 491 aa12.43□□□□□ -0.42
NPLOC4-202ENST00000374747 ZSWIM7Q19AV6 140 aa12.43□□□□□ -0.42
NPLOC4-202ENST00000374747 INO80DQ53TQ3 878 aaPredicted RBP12.43□□□□□ -0.42
NPLOC4-202ENST00000374747 SDE2Q6IQ49 451 aa12.43□□□□□ -0.42
NPLOC4-202ENST00000374747 DNAJC14Q6Y2X3 702 aaPredicted RBP12.43□□□□□ -0.42
NPLOC4-202ENST00000374747 KRT74Q7RTS7 529 aa12.43□□□□□ -0.42
NPLOC4-202ENST00000374747 DHDDSQ86SQ9 333 aa12.43□□□□□ -0.42
NPLOC4-202ENST00000374747 REM2Q8IYK8 340 aaPredicted RBP12.43□□□□□ -0.42
NPLOC4-202ENST00000374747 KATNAL2Q8IYT4 538 aa12.43□□□□□ -0.42
NPLOC4-202ENST00000374747 SHC3Q92529 594 aa12.43□□□□□ -0.42
NPLOC4-202ENST00000374747 MBOAT7Q96N66 472 aa12.43□□□□□ -0.42
NPLOC4-202ENST00000374747 TSPAN18Q96SJ8 248 aa12.43□□□□□ -0.42
NPLOC4-202ENST00000374747 PDGFDQ9GZP0 370 aaPredicted RBP12.43□□□□□ -0.42
NPLOC4-202ENST00000374747 FBXO44Q9H4M3 255 aa12.43□□□□□ -0.42
NPLOC4-202ENST00000374747 CHST7Q9NS84 486 aa12.43□□□□□ -0.42
NPLOC4-202ENST00000374747 EHD3Q9NZN3 535 aa12.43□□□□□ -0.42
NPLOC4-202ENST00000374747 TIMM13Q9Y5L4 95 aaPredicted RBP12.43□□□□□ -0.42
NPLOC4-202ENST00000374747 PGK1P00558 417 aa12.43□□□□□ -0.42
NPLOC4-202ENST00000374747 HPGDP15428 266 aa12.43□□□□□ -0.42
NPLOC4-202ENST00000374747 PAX3P23760 479 aa12.43□□□□□ -0.42
NPLOC4-202ENST00000374747 HNRNPH3P31942 346 aaKnown RBP12.43□□□□□ -0.42
NPLOC4-202ENST00000374747 EFEMP1Q12805 493 aa12.43□□□□□ -0.42
NPLOC4-202ENST00000374747 DGCR6Q14129 220 aa12.43□□□□□ -0.42
NPLOC4-202ENST00000374747 HSDL1Q3SXM5 330 aa12.43□□□□□ -0.42
NPLOC4-202ENST00000374747 TTC23Q5W5X9 447 aa12.43□□□□□ -0.42
NPLOC4-202ENST00000374747 SCARA3Q6AZY7 606 aa12.43□□□□□ -0.42
NPLOC4-202ENST00000374747 CAPSLQ8WWF8 208 aa12.43□□□□□ -0.42
NPLOC4-202ENST00000374747 BAP1Q92560 729 aa12.43□□□□□ -0.42
NPLOC4-202ENST00000374747 MRPS31Q92665 395 aaKnown RBP12.43□□□□□ -0.42
NPLOC4-202ENST00000374747 NACC2Q96BF6 587 aa12.43□□□□□ -0.42
NPLOC4-202ENST00000374747 CDK5RAP1Q96SZ6 601 aaKnown RBP12.43□□□□□ -0.42
NPLOC4-202ENST00000374747 GAD1Q99259 594 aa12.43□□□□□ -0.42
NPLOC4-202ENST00000374747 ELOVL4Q9GZR5 314 aa12.43□□□□□ -0.42
NPLOC4-202ENST00000374747 ST6GALNAC4Q9H4F1 302 aa12.43□□□□□ -0.42
NPLOC4-202ENST00000374747 ARMC7Q9H6L4 198 aa12.43□□□□□ -0.42
NPLOC4-202ENST00000374747 PLGRKTQ9HBL7 147 aa12.43□□□□□ -0.42
NPLOC4-202ENST00000374747 SLC25A13Q9UJS0 675 aa12.43□□□□□ -0.42
NPLOC4-202ENST00000374747 VPS28Q9UK41 221 aa12.43□□□□□ -0.42
NPLOC4-202ENST00000374747 A0A087X1B8 175 aa12.42□□□□□ -0.42
NPLOC4-202ENST00000374747 PSMD12O00232 456 aaPredicted RBP12.42□□□□□ -0.42
NPLOC4-202ENST00000374747 STX11O75558 287 aa12.42□□□□□ -0.42
NPLOC4-202ENST00000374747 VAPBO95292 243 aa12.42□□□□□ -0.42
NPLOC4-202ENST00000374747 HOXB8P17481 243 aaPredicted RBP12.42□□□□□ -0.42
NPLOC4-202ENST00000374747 CYP2A7P20853 494 aa12.42□□□□□ -0.42
NPLOC4-202ENST00000374747 FECHP22830 423 aa12.42□□□□□ -0.42
NPLOC4-202ENST00000374747 NOS3P29474 1203 aa12.42□□□□□ -0.42
NPLOC4-202ENST00000374747 YWHAZP63104 245 aaKnown RBP12.42□□□□□ -0.42
NPLOC4-202ENST00000374747 TGM3Q08188 693 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms