RNA–Protein interactions for RNA: ENST00000374481.7

CD28-202, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 4,526 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-202ENST00000374481 FBXO40Q9UH90 709 aa10.37□□□□□ -0.75
CD28-202ENST00000374481 AGO2Q9UKV8 859 aaKnown RBP10.37□□□□□ -0.75
CD28-202ENST00000374481 SPO11Q9Y5K1 396 aa10.37□□□□□ -0.75
CD28-202ENST00000374481 TYW5A2RUC4 315 aaKnown RBP10.36□□□□□ -0.75
CD28-202ENST00000374481 KCNU1A8MYU2 1149 aa10.36□□□□□ -0.75
CD28-202ENST00000374481 CHADO15335 359 aa10.36□□□□□ -0.75
CD28-202ENST00000374481 ALAS1P13196 640 aa10.36□□□□□ -0.75
CD28-202ENST00000374481 YWHABP31946 246 aaKnown RBP10.36□□□□□ -0.75
CD28-202ENST00000374481 RCVRNP35243 200 aa10.36□□□□□ -0.75
CD28-202ENST00000374481 GRIA4P48058 902 aa10.36□□□□□ -0.75
CD28-202ENST00000374481 HADHBP55084 474 aaKnown RBP10.36□□□□□ -0.75
CD28-202ENST00000374481 CLPPQ16740 277 aaPredicted RBP10.36□□□□□ -0.75
CD28-202ENST00000374481 SLC30A10Q6XR72 485 aa10.36□□□□□ -0.75
CD28-202ENST00000374481 CHST15Q7LFX5 561 aaPredicted RBP10.36□□□□□ -0.75
CD28-202ENST00000374481 DCP2Q8IU60 420 aaKnown RBP10.36□□□□□ -0.75
CD28-202ENST00000374481 TSPAN17Q96FV3 270 aa10.36□□□□□ -0.75
CD28-202ENST00000374481 VCPIP1Q96JH7 1222 aa10.36□□□□□ -0.75
CD28-202ENST00000374481 PHOX2BQ99453 314 aa10.36□□□□□ -0.75
CD28-202ENST00000374481 MTMR12Q9C0I1 747 aa10.36□□□□□ -0.75
CD28-202ENST00000374481 KAT8Q9H7Z6 458 aaKnown RBP10.36□□□□□ -0.75
CD28-202ENST00000374481 CACYBPQ9HB71 228 aaKnown RBP10.36□□□□□ -0.75
CD28-202ENST00000374481 CCNB1IP1Q9NPC3 277 aa10.36□□□□□ -0.75
CD28-202ENST00000374481 ANKMY1Q9P2S6 941 aa10.36□□□□□ -0.75
CD28-202ENST00000374481 MLXQ9UH92 298 aa10.36□□□□□ -0.75
CD28-202ENST00000374481 TRMT6Q9UJA5 497 aaKnown RBP10.36□□□□□ -0.75
CD28-202ENST00000374481 PEX16Q9Y5Y5 336 aa10.36□□□□□ -0.75
CD28-202ENST00000374481 CPQQ9Y646 472 aa10.36□□□□□ -0.75
CD28-202ENST00000374481 MYO5BQ9ULV0 1848 aa10.36□□□□□ -0.75
CD28-202ENST00000374481 TCRBV5S4A2TA0A5A2 114 aa10.36□□□□□ -0.75
CD28-202ENST00000374481 APOC4-APOC2K7ER74 178 aa10.36□□□□□ -0.75
CD28-202ENST00000374481 ZNF701M0R085 212 aaPredicted RBP10.36□□□□□ -0.75
CD28-202ENST00000374481 GRIN3BO60391 1043 aa10.36□□□□□ -0.75
CD28-202ENST00000374481 GRAP2O75791 330 aa10.36□□□□□ -0.75
CD28-202ENST00000374481 CYP7B1O75881 506 aa10.36□□□□□ -0.75
CD28-202ENST00000374481 APOC2P02655 101 aa10.36□□□□□ -0.75
CD28-202ENST00000374481 MT-ND1P03886 318 aa10.36□□□□□ -0.75
CD28-202ENST00000374481 THRBP10828 461 aa10.36□□□□□ -0.75
CD28-202ENST00000374481 CHRNB2P17787 502 aa10.36□□□□□ -0.75
CD28-202ENST00000374481 ITGALP20701 1170 aa10.36□□□□□ -0.75
CD28-202ENST00000374481 HPCAL1P37235 193 aa10.36□□□□□ -0.75
CD28-202ENST00000374481 SURF1Q15526 300 aa10.36□□□□□ -0.75
CD28-202ENST00000374481 RBBP7Q16576 425 aa10.36□□□□□ -0.75
CD28-202ENST00000374481 BOLA3Q53S33 107 aa10.36□□□□□ -0.75
CD28-202ENST00000374481 ERAP2Q6P179 960 aa10.36□□□□□ -0.75
CD28-202ENST00000374481 ZNF517Q6ZMY9 492 aaPredicted RBP10.36□□□□□ -0.75
CD28-202ENST00000374481 ABRAQ8N0Z2 381 aa10.36□□□□□ -0.75
CD28-202ENST00000374481 MIER2Q8N344 545 aa10.36□□□□□ -0.75
CD28-202ENST00000374481 PACRGLQ8N7B6 248 aa10.36□□□□□ -0.75
CD28-202ENST00000374481 DNAJB14Q8TBM8 379 aa10.36□□□□□ -0.75
CD28-202ENST00000374481 JPH3Q8WXH2 748 aaPredicted RBP10.36□□□□□ -0.75
CD28-202ENST00000374481 CLIP3Q96DZ5 547 aa10.36□□□□□ -0.75
CD28-202ENST00000374481 KLHL31Q9H511 634 aa10.36□□□□□ -0.75
CD28-202ENST00000374481 AS3MTQ9HBK9 375 aa10.36□□□□□ -0.75
CD28-202ENST00000374481 ITM2CQ9NQX7 267 aa10.36□□□□□ -0.75
CD28-202ENST00000374481 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.36□□□□□ -0.75
CD28-202ENST00000374481 A0A0G2JPF8 293 aa10.36□□□□□ -0.75
CD28-202ENST00000374481 FAM240BA0A1B0GVZ2 78 aa10.36□□□□□ -0.75
CD28-202ENST00000374481 ZNF99A8MXY4 864 aaPredicted RBP10.36□□□□□ -0.75
CD28-202ENST00000374481 HNRNPCL3B7ZW38 293 aa10.36□□□□□ -0.75
CD28-202ENST00000374481 APBA3O96018 575 aa10.36□□□□□ -0.75
CD28-202ENST00000374481 HNRNPCL4P0DMR1 293 aa10.36□□□□□ -0.75
CD28-202ENST00000374481 COL6A2P12110 1019 aa10.36□□□□□ -0.75
CD28-202ENST00000374481 PTPN7P35236 360 aa10.36□□□□□ -0.75
CD28-202ENST00000374481 ACOT2P49753 483 aa10.36□□□□□ -0.75
CD28-202ENST00000374481 JAM2P57087 298 aa10.36□□□□□ -0.75
CD28-202ENST00000374481 SCN1BQ07699 218 aa10.36□□□□□ -0.75
CD28-202ENST00000374481 TRIM28Q13263 835 aaKnown RBP10.36□□□□□ -0.75
CD28-202ENST00000374481 TP53BP2Q13625 1128 aa10.36□□□□□ -0.75
CD28-202ENST00000374481 AGAP9Q5VTM2 703 aa10.36□□□□□ -0.75
CD28-202ENST00000374481 FBXL19Q6PCT2 694 aa10.36□□□□□ -0.75
CD28-202ENST00000374481 GALNT7Q86SF2 657 aa10.36□□□□□ -0.75
CD28-202ENST00000374481 BRSK2Q8IWQ3 736 aa10.36□□□□□ -0.75
CD28-202ENST00000374481 FAM71AQ8IYT1 594 aa10.36□□□□□ -0.75
CD28-202ENST00000374481 AZIN2Q96A70 460 aa10.36□□□□□ -0.75
CD28-202ENST00000374481 MTMR9Q96QG7 549 aa10.36□□□□□ -0.75
CD28-202ENST00000374481 PCDHB18PQ96TA0 734 aa10.36□□□□□ -0.75
CD28-202ENST00000374481 TTYH2Q9BSA4 534 aa10.36□□□□□ -0.75
CD28-202ENST00000374481 RIC8BQ9NVN3 520 aa10.36□□□□□ -0.75
CD28-202ENST00000374481 ARMC1Q9NVT9 282 aa10.36□□□□□ -0.75
CD28-202ENST00000374481 PIH1D1Q9NWS0 290 aaKnown RBP10.36□□□□□ -0.75
CD28-202ENST00000374481 HSPB11Q9Y547 144 aa10.36□□□□□ -0.75
CD28-202ENST00000374481 NOX1Q9Y5S8 564 aa10.36□□□□□ -0.75
CD28-202ENST00000374481 ATP8B3O60423 1300 aa10.36□□□□□ -0.75
CD28-202ENST00000374481 H3BMQ9 156 aa10.36□□□□□ -0.75
CD28-202ENST00000374481 STX16-NPEPL1H3BU86 382 aa10.36□□□□□ -0.75
CD28-202ENST00000374481 PLD2O14939 933 aa10.36□□□□□ -0.75
CD28-202ENST00000374481 RECQL5O94762 991 aaPredicted RBP10.36□□□□□ -0.75
CD28-202ENST00000374481 CLIC3O95833 236 aa10.36□□□□□ -0.75
CD28-202ENST00000374481 CSF1RP07333 972 aa10.36□□□□□ -0.75
CD28-202ENST00000374481 ATF6P18850 670 aa10.36□□□□□ -0.75
CD28-202ENST00000374481 GPX6P59796 221 aa10.36□□□□□ -0.75
CD28-202ENST00000374481 SRP54P61011 504 aaKnown RBP10.36□□□□□ -0.75
CD28-202ENST00000374481 SNAPC2Q13487 334 aa10.36□□□□□ -0.75
CD28-202ENST00000374481 CUL2Q13617 745 aa10.36□□□□□ -0.75
CD28-202ENST00000374481 MTERF2Q49AM1 385 aa10.36□□□□□ -0.75
CD28-202ENST00000374481 STYK1Q6J9G0 422 aa10.36□□□□□ -0.75
CD28-202ENST00000374481 ILDR2Q71H61 639 aa10.36□□□□□ -0.75
CD28-202ENST00000374481 ADHFE1Q8IWW8 467 aa10.36□□□□□ -0.75
CD28-202ENST00000374481 DEPDC4Q8N2C3 294 aa10.36□□□□□ -0.75
CD28-202ENST00000374481 KCTD17Q8N5Z5 321 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms