RNA–Protein interactions for RNA: ENST00000374116.3

HMGA1-203, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,848 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-203ENST00000374116 PSTKQ8IV42 348 aaKnown RBP14.56□□□□□ -0.08
HMGA1-203ENST00000374116 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.56□□□□□ -0.08
HMGA1-203ENST00000374116 RBM12BQ8IXT5 1001 aaKnown RBP14.56□□□□□ -0.08
HMGA1-203ENST00000374116 DEFB106AQ8N104 65 aa14.56□□□□□ -0.08
HMGA1-203ENST00000374116 RIN3Q8TB24 985 aa14.56□□□□□ -0.08
HMGA1-203ENST00000374116 FGF14Q92915 247 aa14.56□□□□□ -0.08
HMGA1-203ENST00000374116 NPY6RQ99463 290 aa14.56□□□□□ -0.08
HMGA1-203ENST00000374116 KXD1Q9BQD3 176 aa14.56□□□□□ -0.08
HMGA1-203ENST00000374116 TRIM4Q9C037 500 aa14.56□□□□□ -0.08
HMGA1-203ENST00000374116 NACA2Q9H009 215 aa14.56□□□□□ -0.08
HMGA1-203ENST00000374116 KLC2Q9H0B6 622 aa14.56□□□□□ -0.08
HMGA1-203ENST00000374116 PRDM16Q9HAZ2 1276 aa14.56□□□□□ -0.08
HMGA1-203ENST00000374116 RAB6BQ9NRW1 208 aa14.56□□□□□ -0.08
HMGA1-203ENST00000374116 GKN1Q9NS71 199 aa14.56□□□□□ -0.08
HMGA1-203ENST00000374116 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.56□□□□□ -0.08
HMGA1-203ENST00000374116 TEX264Q9Y6I9 313 aa14.56□□□□□ -0.08
HMGA1-203ENST00000374116 TYROBPO43914 113 aa14.55□□□□□ -0.08
HMGA1-203ENST00000374116 ZWINTO95229 277 aa14.55□□□□□ -0.08
HMGA1-203ENST00000374116 LMNAP02545 664 aaKnown RBP14.55□□□□□ -0.08
HMGA1-203ENST00000374116 HMBSP08397 361 aa14.55□□□□□ -0.08
HMGA1-203ENST00000374116 NCAM1P13591 858 aa14.55□□□□□ -0.08
HMGA1-203ENST00000374116 CA4P22748 312 aa14.55□□□□□ -0.08
HMGA1-203ENST00000374116 RBL1P28749 1068 aa14.55□□□□□ -0.08
HMGA1-203ENST00000374116 FOXN2P32314 431 aa14.55□□□□□ -0.08
HMGA1-203ENST00000374116 NOS2P35228 1153 aa14.55□□□□□ -0.08
HMGA1-203ENST00000374116 NRLP54845 237 aa14.55□□□□□ -0.08
HMGA1-203ENST00000374116 YWHAZP63104 245 aaKnown RBP14.55□□□□□ -0.08
HMGA1-203ENST00000374116 EFEMP1Q12805 493 aa14.55□□□□□ -0.08
HMGA1-203ENST00000374116 AAK1Q2M2I8 961 aa14.55□□□□□ -0.08
HMGA1-203ENST00000374116 HECTD3Q5T447 861 aa14.55□□□□□ -0.08
HMGA1-203ENST00000374116 OR52E8Q6IFG1 317 aa14.55□□□□□ -0.08
HMGA1-203ENST00000374116 CMTM8Q8IZV2 173 aa14.55□□□□□ -0.08
HMGA1-203ENST00000374116 KIF2BQ8N4N8 673 aa14.55□□□□□ -0.08
HMGA1-203ENST00000374116 FITM2Q8N6M3 262 aa14.55□□□□□ -0.08
HMGA1-203ENST00000374116 CCDC185Q8N715 623 aa14.55□□□□□ -0.08
HMGA1-203ENST00000374116 DCAKDQ8WVC6 231 aa14.55□□□□□ -0.08
HMGA1-203ENST00000374116 UTP4Q969X6 686 aaKnown RBP14.55□□□□□ -0.08
HMGA1-203ENST00000374116 ALKBH8Q96BT7 664 aaKnown RBP14.55□□□□□ -0.08
HMGA1-203ENST00000374116 RSPRY1Q96DX4 576 aa14.55□□□□□ -0.08
HMGA1-203ENST00000374116 CCDC28BQ9BUN5 200 aa14.55□□□□□ -0.08
HMGA1-203ENST00000374116 MAGEB5Q9BZ81 275 aa14.55□□□□□ -0.08
HMGA1-203ENST00000374116 FAM192AQ9GZU8 254 aa14.55□□□□□ -0.08
HMGA1-203ENST00000374116 DHX35Q9H5Z1 703 aaKnown RBP14.55□□□□□ -0.08
HMGA1-203ENST00000374116 TASP1Q9H6P5 420 aa14.55□□□□□ -0.08
HMGA1-203ENST00000374116 COMMD8Q9NX08 183 aa14.55□□□□□ -0.08
HMGA1-203ENST00000374116 AP4E1Q9UPM8 1137 aa14.55□□□□□ -0.08
HMGA1-203ENST00000374116 CHMP2BQ9UQN3 213 aa14.55□□□□□ -0.08
HMGA1-203ENST00000374116 SYNJ2BP-COX16A0A087WUM0 186 aa14.55□□□□□ -0.08
HMGA1-203ENST00000374116 A0A1W2PPM1 405 aa14.55□□□□□ -0.08
HMGA1-203ENST00000374116 MSI1O43347 362 aaKnown RBP14.55□□□□□ -0.08
HMGA1-203ENST00000374116 IRF1P10914 325 aa14.55□□□□□ -0.08
HMGA1-203ENST00000374116 MBL2P11226 248 aaPredicted RBP14.55□□□□□ -0.08
HMGA1-203ENST00000374116 RPA3P35244 121 aaPredicted RBP14.55□□□□□ -0.08
HMGA1-203ENST00000374116 AVPR1AP37288 418 aa14.55□□□□□ -0.08
HMGA1-203ENST00000374116 TANGO2Q6ICL3 276 aa14.55□□□□□ -0.08
HMGA1-203ENST00000374116 C4orf33Q8N1A6 199 aa14.55□□□□□ -0.08
HMGA1-203ENST00000374116 TDRD5Q8NAT2 981 aaKnown RBP14.55□□□□□ -0.08
HMGA1-203ENST00000374116 PDZD8Q8NEN9 1154 aa14.55□□□□□ -0.08
HMGA1-203ENST00000374116 USP13Q92995 863 aaPredicted RBP14.55□□□□□ -0.08
HMGA1-203ENST00000374116 WBP2Q969T9 261 aa14.55□□□□□ -0.08
HMGA1-203ENST00000374116 MRRFQ96E11 262 aaKnown RBP14.55□□□□□ -0.08
HMGA1-203ENST00000374116 ASB16Q96NS5 453 aa14.55□□□□□ -0.08
HMGA1-203ENST00000374116 LRRC3BQ96PB8 259 aa14.55□□□□□ -0.08
HMGA1-203ENST00000374116 KCTD15Q96SI1 283 aaPredicted RBP14.55□□□□□ -0.08
HMGA1-203ENST00000374116 PITPNM3Q9BZ71 974 aa14.55□□□□□ -0.08
HMGA1-203ENST00000374116 PLA2G2FQ9BZM2 168 aa14.55□□□□□ -0.08
HMGA1-203ENST00000374116 ETNK2Q9NVF9 386 aa14.55□□□□□ -0.08
HMGA1-203ENST00000374116 COX16Q9P0S2 106 aa14.55□□□□□ -0.08
HMGA1-203ENST00000374116 FZD10Q9ULW2 581 aa14.55□□□□□ -0.08
HMGA1-203ENST00000374116 RPS6KL1Q9Y6S9 549 aa14.55□□□□□ -0.08
HMGA1-203ENST00000374116 GCATO75600 419 aa14.54□□□□□ -0.08
HMGA1-203ENST00000374116 FBXO21O94952 628 aa14.54□□□□□ -0.08
HMGA1-203ENST00000374116 FGF19O95750 216 aa14.54□□□□□ -0.08
HMGA1-203ENST00000374116 KRT4P19013 534 aa14.54□□□□□ -0.08
HMGA1-203ENST00000374116 MAGEA8P43361 318 aa14.54□□□□□ -0.08
HMGA1-203ENST00000374116 TUBP50607 506 aa14.54□□□□□ -0.08
HMGA1-203ENST00000374116 SLC10A2Q12908 348 aaPredicted RBP14.54□□□□□ -0.08
HMGA1-203ENST00000374116 EFTUD2Q15029 972 aaKnown RBP eCLIP14.54□□□□□ -0.084e-21■■■■■ 39.2
HMGA1-203ENST00000374116 PDK4Q16654 411 aa14.54□□□□□ -0.08
HMGA1-203ENST00000374116 PUS10Q3MIT2 529 aaKnown RBP14.54□□□□□ -0.08
HMGA1-203ENST00000374116 DCAF6Q58WW2 860 aa14.54□□□□□ -0.08
HMGA1-203ENST00000374116 SLC45A4Q5BKX6 768 aa14.54□□□□□ -0.08
HMGA1-203ENST00000374116 HHATQ5VTY9 493 aa14.54□□□□□ -0.08
HMGA1-203ENST00000374116 OTOP3Q7RTS5 596 aa14.54□□□□□ -0.08
HMGA1-203ENST00000374116 IGDCC3Q8IVU1 814 aa14.54□□□□□ -0.08
HMGA1-203ENST00000374116 MCUQ8NE86 351 aa14.54□□□□□ -0.08
HMGA1-203ENST00000374116 MZB1Q8WU39 189 aa14.54□□□□□ -0.08
HMGA1-203ENST00000374116 OVCA2Q8WZ82 227 aa14.54□□□□□ -0.08
HMGA1-203ENST00000374116 CSPG4P5Q96PW8 444 aa14.54□□□□□ -0.08
HMGA1-203ENST00000374116 CD320Q9NPF0 282 aa14.54□□□□□ -0.08
HMGA1-203ENST00000374116 RCOR3Q9P2K3 495 aaPredicted RBP14.54□□□□□ -0.08
HMGA1-203ENST00000374116 NKX1-2Q9UD57 310 aaPredicted RBP14.54□□□□□ -0.08
HMGA1-203ENST00000374116 STK38LQ9Y2H1 464 aa14.54□□□□□ -0.08
HMGA1-203ENST00000374116 STARD13Q9Y3M8 1113 aa14.54□□□□□ -0.08
HMGA1-203ENST00000374116 CPQQ9Y646 472 aa14.54□□□□□ -0.08
HMGA1-203ENST00000374116 IKBKGQ9Y6K9 419 aa14.54□□□□□ -0.08
HMGA1-203ENST00000374116 TRAV19A0A0A6YYK7 116 aa14.53□□□□□ -0.08
HMGA1-203ENST00000374116 IQANK1A0A1B0GTG1 560 aa14.53□□□□□ -0.08
HMGA1-203ENST00000374116 CAPN9O14815 690 aa14.53□□□□□ -0.08
HMGA1-203ENST00000374116 FCARP24071 287 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms