RNA–Protein interactions for RNA: ENST00000373380.5

CSMD2-204, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 2 BASIC

Gene CSMD2, Length 4,379 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-204ENST00000373380 FOXN2P32314 431 aa11.02□□□□□ -0.65
CSMD2-204ENST00000373380 CHN2P52757 468 aa11.02□□□□□ -0.65
CSMD2-204ENST00000373380 NRLP54845 237 aa11.02□□□□□ -0.65
CSMD2-204ENST00000373380 MSLNQ13421 630 aaPredicted RBP11.02□□□□□ -0.65
CSMD2-204ENST00000373380 ZIK1Q3SY52 487 aaPredicted RBP11.02□□□□□ -0.65
CSMD2-204ENST00000373380 FAM43BQ6ZT52 329 aaPredicted RBP11.02□□□□□ -0.65
CSMD2-204ENST00000373380 XYLT1Q86Y38 959 aa11.02□□□□□ -0.65
CSMD2-204ENST00000373380 LENG9Q96B70 501 aa11.02□□□□□ -0.65
CSMD2-204ENST00000373380 NXF3Q9H4D5 531 aaKnown RBP11.02□□□□□ -0.65
CSMD2-204ENST00000373380 SH3BP4Q9P0V3 963 aa11.02□□□□□ -0.65
CSMD2-204ENST00000373380 TSC22D2O75157 780 aa11.01□□□□□ -0.65
CSMD2-204ENST00000373380 LTA4HP09960 611 aaKnown RBP11.01□□□□□ -0.65
CSMD2-204ENST00000373380 TRIM25Q14258 630 aaKnown RBP11.01□□□□□ -0.65
CSMD2-204ENST00000373380 VWA5B1Q5TIE3 1220 aa11.01□□□□□ -0.65
CSMD2-204ENST00000373380 DCAF12L1Q5VU92 463 aa11.01□□□□□ -0.65
CSMD2-204ENST00000373380 CXCL17Q6UXB2 119 aa11.01□□□□□ -0.65
CSMD2-204ENST00000373380 NECAB2Q7Z6G3 386 aa11.01□□□□□ -0.65
CSMD2-204ENST00000373380 MILR1Q7Z6M3 343 aa11.01□□□□□ -0.65
CSMD2-204ENST00000373380 HPS6Q86YV9 775 aa11.01□□□□□ -0.65
CSMD2-204ENST00000373380 BBS7Q8IWZ6 715 aa11.01□□□□□ -0.65
CSMD2-204ENST00000373380 C1orf127Q8N9H9 656 aa11.01□□□□□ -0.65
CSMD2-204ENST00000373380 UTP15Q8TED0 518 aaKnown RBP11.01□□□□□ -0.65
CSMD2-204ENST00000373380 OSCP1Q8WVF1 389 aa11.01□□□□□ -0.65
CSMD2-204ENST00000373380 VPS33AQ96AX1 596 aa11.01□□□□□ -0.65
CSMD2-204ENST00000373380 ADAM2Q99965 735 aa11.01□□□□□ -0.65
CSMD2-204ENST00000373380 FAM192AQ9GZU8 254 aa11.01□□□□□ -0.65
CSMD2-204ENST00000373380 DAPK2Q9UIK4 370 aa11.01□□□□□ -0.65
CSMD2-204ENST00000373380 CHKBQ9Y259 395 aa11.01□□□□□ -0.65
CSMD2-204ENST00000373380 RAP2CQ9Y3L5 183 aa11.01□□□□□ -0.65
CSMD2-204ENST00000373380 HS6ST1O60243 411 aa11.01□□□□□ -0.65
CSMD2-204ENST00000373380 KRT6AP02538 564 aa11.01□□□□□ -0.65
CSMD2-204ENST00000373380 KRT6BP04259 564 aa11.01□□□□□ -0.65
CSMD2-204ENST00000373380 KRT6CP48668 564 aa11.01□□□□□ -0.65
CSMD2-204ENST00000373380 CEP78Q5JTW2 689 aa11.01□□□□□ -0.65
CSMD2-204ENST00000373380 PPP4R4Q6NUP7 873 aa11.01□□□□□ -0.65
CSMD2-204ENST00000373380 IL27RAQ6UWB1 636 aa11.01□□□□□ -0.65
CSMD2-204ENST00000373380 UTS2BQ765I0 119 aa11.01□□□□□ -0.65
CSMD2-204ENST00000373380 PIWIL4Q7Z3Z4 852 aaKnown RBP11.01□□□□□ -0.65
CSMD2-204ENST00000373380 RAB42Q8N4Z0 105 aa11.01□□□□□ -0.65
CSMD2-204ENST00000373380 OR56A4Q8NGH8 313 aa11.01□□□□□ -0.65
CSMD2-204ENST00000373380 SPPL2AQ8TCT8 520 aa11.01□□□□□ -0.65
CSMD2-204ENST00000373380 MRPS31Q92665 395 aaKnown RBP11.01□□□□□ -0.65
CSMD2-204ENST00000373380 LPPQ93052 612 aa11.01□□□□□ -0.65
CSMD2-204ENST00000373380 ZFRQ96KR1 1074 aaKnown RBP11.01□□□□□ -0.65
CSMD2-204ENST00000373380 CSPG4P5Q96PW8 444 aa11.01□□□□□ -0.65
CSMD2-204ENST00000373380 SLC4A5Q9BY07 1137 aa11.01□□□□□ -0.65
CSMD2-204ENST00000373380 LHX5Q9H2C1 402 aa11.01□□□□□ -0.65
CSMD2-204ENST00000373380 ST6GALNAC4Q9H4F1 302 aa11.01□□□□□ -0.65
CSMD2-204ENST00000373380 VPS45Q9NRW7 570 aa11.01□□□□□ -0.65
CSMD2-204ENST00000373380 MARCH2Q9P0N8 246 aa11.01□□□□□ -0.65
CSMD2-204ENST00000373380 STXBP5LQ9Y2K9 1186 aa11.01□□□□□ -0.65
CSMD2-204ENST00000373380 PCDHA2Q9Y5H9 948 aa11.01□□□□□ -0.65
CSMD2-204ENST00000373380 CICQ96RK0 1608 aaPredicted RBP11.01□□□□□ -0.65
CSMD2-204ENST00000373380 BIRC5O15392 142 aa11.01□□□□□ -0.65
CSMD2-204ENST00000373380 SNRPB2P08579 225 aaKnown RBP11.01□□□□□ -0.65
CSMD2-204ENST00000373380 LBPP18428 481 aa11.01□□□□□ -0.65
CSMD2-204ENST00000373380 MMP14P50281 582 aa11.01□□□□□ -0.65
CSMD2-204ENST00000373380 WDR4P57081 412 aaKnown RBP11.01□□□□□ -0.65
CSMD2-204ENST00000373380 BOP1Q14137 746 aaKnown RBP11.01□□□□□ -0.65
CSMD2-204ENST00000373380 HIST2H2ACQ16777 129 aaPredicted RBP11.01□□□□□ -0.65
CSMD2-204ENST00000373380 KHDC1Q4VXA5 237 aaKnown RBP11.01□□□□□ -0.65
CSMD2-204ENST00000373380 HIST2H2AA3Q6FI13 130 aa11.01□□□□□ -0.65
CSMD2-204ENST00000373380 MARK2Q7KZI7 788 aaKnown RBP11.01□□□□□ -0.65
CSMD2-204ENST00000373380 PLPPR4Q7Z2D5 763 aa11.01□□□□□ -0.65
CSMD2-204ENST00000373380 MTFR1LQ9H019 292 aa11.01□□□□□ -0.65
CSMD2-204ENST00000373380 EFR3BQ9Y2G0 817 aa11.01□□□□□ -0.65
CSMD2-204ENST00000373380 MYH10P35580 1976 aa11.01□□□□□ -0.65
CSMD2-204ENST00000373380 A0A087WXM4 84 aa11□□□□□ -0.65
CSMD2-204ENST00000373380 TAF4O00268 1085 aa11□□□□□ -0.65
CSMD2-204ENST00000373380 B4GALT4O60513 344 aa11□□□□□ -0.65
CSMD2-204ENST00000373380 ARIH2O95376 493 aa11□□□□□ -0.65
CSMD2-204ENST00000373380 ABCB1P08183 1280 aaPredicted RBP11□□□□□ -0.65
CSMD2-204ENST00000373380 GDF10P55107 478 aa11□□□□□ -0.65
CSMD2-204ENST00000373380 SDHAF4Q5VUM1 108 aa11□□□□□ -0.65
CSMD2-204ENST00000373380 PMF1Q6P1K2 205 aa11□□□□□ -0.65
CSMD2-204ENST00000373380 ZNF572Q7Z3I7 529 aaPredicted RBP11□□□□□ -0.65
CSMD2-204ENST00000373380 PIGWQ7Z7B1 504 aa11□□□□□ -0.65
CSMD2-204ENST00000373380 FBXO30Q8TB52 745 aa11□□□□□ -0.65
CSMD2-204ENST00000373380 DGCR6LQ9BY27 220 aa11□□□□□ -0.65
CSMD2-204ENST00000373380 MORF4L1Q9UBU8 362 aa11□□□□□ -0.65
CSMD2-204ENST00000373380 BTRCQ9Y297 605 aa11□□□□□ -0.65
CSMD2-204ENST00000373380 CHD4Q14839 1912 aa11□□□□□ -0.65
CSMD2-204ENST00000373380 URB1O60287 2271 aaKnown RBP11□□□□□ -0.65
CSMD2-204ENST00000373380 GPR25O00155 361 aa11□□□□□ -0.65
CSMD2-204ENST00000373380 PIK3R1P27986 724 aa11□□□□□ -0.65
CSMD2-204ENST00000373380 AXLP30530 894 aa11□□□□□ -0.65
CSMD2-204ENST00000373380 CCNHP51946 323 aaPredicted RBP11□□□□□ -0.65
CSMD2-204ENST00000373380 RAB14P61106 215 aa11□□□□□ -0.65
CSMD2-204ENST00000373380 BFSP2Q13515 415 aa11□□□□□ -0.65
CSMD2-204ENST00000373380 INAQ16352 499 aa11□□□□□ -0.65
CSMD2-204ENST00000373380 RSBN1Q5VWQ0 802 aaPredicted RBP11□□□□□ -0.65
CSMD2-204ENST00000373380 RAP1GAP2Q684P5 730 aa11□□□□□ -0.65
CSMD2-204ENST00000373380 ADGRD1Q6QNK2 874 aa11□□□□□ -0.65
CSMD2-204ENST00000373380 ZDHHC13Q8IUH4 622 aa11□□□□□ -0.65
CSMD2-204ENST00000373380 ZCCHC7Q8N3Z6 543 aaKnown RBP11□□□□□ -0.65
CSMD2-204ENST00000373380 ITFG1Q8TB96 612 aa11□□□□□ -0.65
CSMD2-204ENST00000373380 DLG3Q92796 817 aa11□□□□□ -0.65
CSMD2-204ENST00000373380 EXOC2Q96KP1 924 aa11□□□□□ -0.65
CSMD2-204ENST00000373380 USE1Q9NZ43 259 aa11□□□□□ -0.65
CSMD2-204ENST00000373380 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms