RNA–Protein interactions for RNA: ENST00000370022.9

PRPF38B-202, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best) BASIC

Gene PRPF38B, Length 1,591 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-202ENST00000370022 GDAP1L1Q96MZ0 367 aa15.79■□□□□ 0.12
PRPF38B-202ENST00000370022 OSBPL9Q96SU4 736 aa15.79■□□□□ 0.12
PRPF38B-202ENST00000370022 NAP1L3Q99457 506 aaPredicted RBP15.79■□□□□ 0.12
PRPF38B-202ENST00000370022 FERMT1Q9BQL6 677 aa15.79■□□□□ 0.12
PRPF38B-202ENST00000370022 FAM126AQ9BYI3 521 aaPredicted RBP15.79■□□□□ 0.12
PRPF38B-202ENST00000370022 RSPH9Q9H1X1 276 aaPredicted RBP15.79■□□□□ 0.12
PRPF38B-202ENST00000370022 RAPGEFL1Q9UHV5 662 aa15.79■□□□□ 0.12
PRPF38B-202ENST00000370022 TTC7AQ9ULT0 858 aaPredicted RBP15.79■□□□□ 0.12
PRPF38B-202ENST00000370022 NYNRINQ9P2P1 1898 aaKnown RBP15.79■□□□□ 0.12
PRPF38B-202ENST00000370022 KMT2EQ8IZD2 1858 aa15.79■□□□□ 0.12
PRPF38B-202ENST00000370022 GALR2O43603 387 aaPredicted RBP15.79■□□□□ 0.12
PRPF38B-202ENST00000370022 IGSF6O95976 241 aa15.79■□□□□ 0.12
PRPF38B-202ENST00000370022 FGGP02679 453 aa15.79■□□□□ 0.12
PRPF38B-202ENST00000370022 CCNB1P14635 433 aa15.79■□□□□ 0.12
PRPF38B-202ENST00000370022 VAV1P15498 845 aa15.79■□□□□ 0.12
PRPF38B-202ENST00000370022 MMP13P45452 471 aa15.79■□□□□ 0.12
PRPF38B-202ENST00000370022 MAPK8P45983 427 aa15.79■□□□□ 0.12
PRPF38B-202ENST00000370022 CSNK1DP48730 415 aa15.79■□□□□ 0.12
PRPF38B-202ENST00000370022 COPAP53621 1224 aa15.79■□□□□ 0.12
PRPF38B-202ENST00000370022 NRLP54845 237 aa15.79■□□□□ 0.12
PRPF38B-202ENST00000370022 IFI35P80217 286 aaPredicted RBP15.79■□□□□ 0.12
PRPF38B-202ENST00000370022 SLC45A4Q5BKX6 768 aa15.79■□□□□ 0.12
PRPF38B-202ENST00000370022 TMPRSS6Q8IU80 811 aa15.79■□□□□ 0.12
PRPF38B-202ENST00000370022 CDKL3Q8IVW4 592 aaPredicted RBP15.79■□□□□ 0.12
PRPF38B-202ENST00000370022 MAML2Q8IZL2 1156 aaPredicted RBP15.79■□□□□ 0.12
PRPF38B-202ENST00000370022 RASGEF1CQ8N431 466 aa15.79■□□□□ 0.12
PRPF38B-202ENST00000370022 QKIQ96PU8 341 aaKnown RBP eCLIP15.79■□□□□ 0.12
PRPF38B-202ENST00000370022 HHIPQ96QV1 700 aa15.79■□□□□ 0.12
PRPF38B-202ENST00000370022 TNKS2Q9H2K2 1166 aa15.79■□□□□ 0.12
PRPF38B-202ENST00000370022 MTG2Q9H4K7 406 aa15.79■□□□□ 0.12
PRPF38B-202ENST00000370022 POLR3BQ9NW08 1133 aaPredicted RBP15.79■□□□□ 0.12
PRPF38B-202ENST00000370022 LHX3Q9UBR4 397 aa15.79■□□□□ 0.12
PRPF38B-202ENST00000370022 SCML1Q9UN30 329 aa15.79■□□□□ 0.12
PRPF38B-202ENST00000370022 NUP205Q92621 2012 aa15.79■□□□□ 0.12
PRPF38B-202ENST00000370022 NEBLO76041 1014 aa15.78■□□□□ 0.12
PRPF38B-202ENST00000370022 POP4O95707 220 aaKnown RBP15.78■□□□□ 0.12
PRPF38B-202ENST00000370022 PRNPP04156 253 aa15.78■□□□□ 0.12
PRPF38B-202ENST00000370022 GABRG2P18507 467 aa15.78■□□□□ 0.12
PRPF38B-202ENST00000370022 EIF3EP60228 445 aaKnown RBP15.78■□□□□ 0.12
PRPF38B-202ENST00000370022 CSTF1Q05048 431 aaKnown RBP15.78■□□□□ 0.12
PRPF38B-202ENST00000370022 RAD51Q06609 339 aa15.78■□□□□ 0.12
PRPF38B-202ENST00000370022 SFSWAPQ12872 951 aaKnown RBP15.78■□□□□ 0.12
PRPF38B-202ENST00000370022 GRM3Q14832 879 aa15.78■□□□□ 0.12
PRPF38B-202ENST00000370022 RALGPS1Q5JS13 557 aa15.78■□□□□ 0.12
PRPF38B-202ENST00000370022 FAM46CQ5VWP2 391 aa15.78■□□□□ 0.12
PRPF38B-202ENST00000370022 ZNF776Q68DI1 518 aaPredicted RBP15.78■□□□□ 0.12
PRPF38B-202ENST00000370022 ANO7Q6IWH7 933 aa15.78■□□□□ 0.12
PRPF38B-202ENST00000370022 DPY19L3Q6ZPD9 716 aa15.78■□□□□ 0.12
PRPF38B-202ENST00000370022 NYAP1Q6ZVC0 841 aa15.78■□□□□ 0.12
PRPF38B-202ENST00000370022 ZC3H18Q86VM9 953 aaKnown RBP15.78■□□□□ 0.12
PRPF38B-202ENST00000370022 STK40Q8N2I9 435 aa15.78■□□□□ 0.12
PRPF38B-202ENST00000370022 TSEN2Q8NCE0 465 aaKnown RBP15.78■□□□□ 0.12
PRPF38B-202ENST00000370022 TMIEQ8NEW7 156 aa15.78■□□□□ 0.12
PRPF38B-202ENST00000370022 HMGB4Q8WW32 186 aa15.78■□□□□ 0.12
PRPF38B-202ENST00000370022 PRCCQ92733 491 aaPredicted RBP15.78■□□□□ 0.12
PRPF38B-202ENST00000370022 MRGPRX1Q96LB2 322 aa15.78■□□□□ 0.12
PRPF38B-202ENST00000370022 FAM129BQ96TA1 746 aa15.78■□□□□ 0.12
PRPF38B-202ENST00000370022 VAT1Q99536 393 aa15.78■□□□□ 0.12
PRPF38B-202ENST00000370022 TM6SF2Q9BZW4 377 aa15.78■□□□□ 0.12
PRPF38B-202ENST00000370022 MKRN2Q9H000 416 aaKnown RBP15.78■□□□□ 0.12
PRPF38B-202ENST00000370022 HOMER3Q9NSC5 361 aa15.78■□□□□ 0.12
PRPF38B-202ENST00000370022 BCCIPQ9P287 314 aaKnown RBP eCLIP15.78■□□□□ 0.12
PRPF38B-202ENST00000370022 CKAP5Q14008 2032 aa15.78■□□□□ 0.12
PRPF38B-202ENST00000370022 TCRBV7S2A1N4TA0A589 114 aa15.77■□□□□ 0.11
PRPF38B-202ENST00000370022 C1QTNF3-AMACRE9PGA6 284 aa15.77■□□□□ 0.11
PRPF38B-202ENST00000370022 H7C0C1 242 aa15.77■□□□□ 0.11
PRPF38B-202ENST00000370022 BNIP3LO60238 219 aa15.77■□□□□ 0.11
PRPF38B-202ENST00000370022 ADH1BP00325 375 aa15.77■□□□□ 0.11
PRPF38B-202ENST00000370022 RBP3P10745 1247 aa15.77■□□□□ 0.11
PRPF38B-202ENST00000370022 TDGF1P13385 188 aa15.77■□□□□ 0.11
PRPF38B-202ENST00000370022 NDUFV2P19404 249 aa15.77■□□□□ 0.11
PRPF38B-202ENST00000370022 CES1P23141 567 aa15.77■□□□□ 0.11
PRPF38B-202ENST00000370022 CHRNA3P32297 505 aa15.77■□□□□ 0.11
PRPF38B-202ENST00000370022 ATP5OP48047 213 aa15.77■□□□□ 0.11
PRPF38B-202ENST00000370022 CCNHP51946 323 aaPredicted RBP15.77■□□□□ 0.11
PRPF38B-202ENST00000370022 ANGPT1Q15389 498 aa15.77■□□□□ 0.11
PRPF38B-202ENST00000370022 LONRF2Q1L5Z9 754 aa15.77■□□□□ 0.11
PRPF38B-202ENST00000370022 MYLK3Q32MK0 819 aa15.77■□□□□ 0.11
PRPF38B-202ENST00000370022 HEATR6Q6AI08 1181 aaKnown RBP15.77■□□□□ 0.11
PRPF38B-202ENST00000370022 PGBD3Q8N328 593 aa15.77■□□□□ 0.11
PRPF38B-202ENST00000370022 MDGA1Q8NFP4 955 aa15.77■□□□□ 0.11
PRPF38B-202ENST00000370022 ACTRT1Q8TDG2 376 aa15.77■□□□□ 0.11
PRPF38B-202ENST00000370022 HTR3CQ8WXA8 447 aa15.77■□□□□ 0.11
PRPF38B-202ENST00000370022 SIPA1Q96FS4 1042 aa15.77■□□□□ 0.11
PRPF38B-202ENST00000370022 IL12RB2Q99665 862 aa15.77■□□□□ 0.11
PRPF38B-202ENST00000370022 MGME1Q9BQP7 344 aa15.77■□□□□ 0.11
PRPF38B-202ENST00000370022 HEPHQ9BQS7 1158 aa15.77■□□□□ 0.11
PRPF38B-202ENST00000370022 RBM22Q9NW64 420 aaKnown RBP eCLIP15.77■□□□□ 0.115e-6■□□□□ 8.3
PRPF38B-202ENST00000370022 IL36AQ9UHA7 158 aa15.77■□□□□ 0.11
PRPF38B-202ENST00000370022 PPM1HQ9ULR3 514 aa15.77■□□□□ 0.11
PRPF38B-202ENST00000370022 SAR1BQ9Y6B6 198 aa15.77■□□□□ 0.11
PRPF38B-202ENST00000370022 MYO18AQ92614 2054 aaKnown RBP15.77■□□□□ 0.11
PRPF38B-202ENST00000370022 ZDBF2Q9HCK1 2354 aa15.76■□□□□ 0.11
PRPF38B-202ENST00000370022 BCLAF3A2AJT9 711 aaKnown RBP15.76■□□□□ 0.11
PRPF38B-202ENST00000370022 KIF2AO00139 706 aaPredicted RBP15.76■□□□□ 0.11
PRPF38B-202ENST00000370022 KCNK1O00180 336 aa15.76■□□□□ 0.11
PRPF38B-202ENST00000370022 PGRMC1O00264 195 aaKnown RBP15.76■□□□□ 0.11
PRPF38B-202ENST00000370022 ZNF217O75362 1048 aa15.76■□□□□ 0.11
PRPF38B-202ENST00000370022 DNTTP04053 509 aa15.76■□□□□ 0.11
PRPF38B-202ENST00000370022 CASQ1P31415 396 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms