RNA–Protein interactions for RNA: ENST00000369733.7

COL17A1-202, Transcript of collagen type XVII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL17A1, Length 5,488 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-202ENST00000369733 HDDC2Q7Z4H3 204 aa16.11■□□□□ 0.17
COL17A1-202ENST00000369733 BTN2A2Q8WVV5 523 aa16.11■□□□□ 0.17
COL17A1-202ENST00000369733 WNT8BQ93098 351 aa16.11■□□□□ 0.17
COL17A1-202ENST00000369733 CIB1Q99828 191 aa16.11■□□□□ 0.17
COL17A1-202ENST00000369733 PRKAG3Q9UGI9 489 aa16.11■□□□□ 0.17
COL17A1-202ENST00000369733 PRG3Q9Y2Y8 225 aaPredicted RBP16.11■□□□□ 0.17
COL17A1-202ENST00000369733 IPPQ9Y573 584 aa16.11■□□□□ 0.17
COL17A1-202ENST00000369733 UBIAD1Q9Y5Z9 338 aa16.11■□□□□ 0.17
COL17A1-202ENST00000369733 MRPL42Q9Y6G3 142 aaKnown RBP16.11■□□□□ 0.17
COL17A1-202ENST00000369733 MYO5BQ9ULV0 1848 aa16.11■□□□□ 0.17
COL17A1-202ENST00000369733 SLC12A8A0AV02 714 aa16.1■□□□□ 0.17
COL17A1-202ENST00000369733 C17orf102A2RUQ5 167 aa16.1■□□□□ 0.17
COL17A1-202ENST00000369733 TRIM43BA6NCK2 446 aa16.1■□□□□ 0.17
COL17A1-202ENST00000369733 DPYSL4O14531 572 aa16.1■□□□□ 0.17
COL17A1-202ENST00000369733 SPTLC1O15269 473 aa16.1■□□□□ 0.17
COL17A1-202ENST00000369733 PDE9AO76083 593 aa16.1■□□□□ 0.17
COL17A1-202ENST00000369733 GOT1P17174 413 aa16.1■□□□□ 0.17
COL17A1-202ENST00000369733 AKAP5P24588 427 aa16.1■□□□□ 0.17
COL17A1-202ENST00000369733 SNAPC2Q13487 334 aa16.1■□□□□ 0.17
COL17A1-202ENST00000369733 SLC15A2Q16348 729 aa16.1■□□□□ 0.17
COL17A1-202ENST00000369733 CYP1B1Q16678 543 aa16.1■□□□□ 0.17
COL17A1-202ENST00000369733 CCDC149Q6ZUS6 474 aa16.1■□□□□ 0.17
COL17A1-202ENST00000369733 HELQQ8TDG4 1101 aa16.1■□□□□ 0.17
COL17A1-202ENST00000369733 PTTG2Q9NZH5 202 aa16.1■□□□□ 0.17
COL17A1-202ENST00000369733 ENDOD1O94919 500 aa16.1■□□□□ 0.17
COL17A1-202ENST00000369733 RTN3O95197 1032 aaPredicted RBP16.1■□□□□ 0.17
COL17A1-202ENST00000369733 GSTM1P09488 218 aa16.1■□□□□ 0.17
COL17A1-202ENST00000369733 TGFB3P10600 412 aa16.1■□□□□ 0.17
COL17A1-202ENST00000369733 MMP8P22894 467 aa16.1■□□□□ 0.17
COL17A1-202ENST00000369733 NOS2P35228 1153 aa16.1■□□□□ 0.17
COL17A1-202ENST00000369733 OSMRQ99650 979 aa16.1■□□□□ 0.17
COL17A1-202ENST00000369733 PRDM12Q9H4Q4 367 aa16.1■□□□□ 0.17
COL17A1-202ENST00000369733 REEP1Q9H902 201 aa16.1■□□□□ 0.17
COL17A1-202ENST00000369733 NKX1-2Q9UD57 310 aaPredicted RBP16.1■□□□□ 0.17
COL17A1-202ENST00000369733 FAM220BPB1ANY3 271 aa16.1■□□□□ 0.17
COL17A1-202ENST00000369733 CABYRO75952 493 aa16.1■□□□□ 0.17
COL17A1-202ENST00000369733 MYCP01106 439 aaPredicted RBP16.1■□□□□ 0.17
COL17A1-202ENST00000369733 NFICP08651 508 aa16.1■□□□□ 0.17
COL17A1-202ENST00000369733 PCNAP12004 261 aa16.1■□□□□ 0.17
COL17A1-202ENST00000369733 TFEBP19484 476 aa16.1■□□□□ 0.17
COL17A1-202ENST00000369733 VWA5B1Q5TIE3 1220 aa16.1■□□□□ 0.17
COL17A1-202ENST00000369733 C6orf89Q6UWU4 347 aa16.1■□□□□ 0.17
COL17A1-202ENST00000369733 AMER2Q8N7J2 671 aa16.1■□□□□ 0.17
COL17A1-202ENST00000369733 BHMTQ93088 406 aa16.1■□□□□ 0.17
COL17A1-202ENST00000369733 ZNF570Q96NI8 536 aa16.1■□□□□ 0.17
COL17A1-202ENST00000369733 TAS2R1Q9NYW7 299 aa16.1■□□□□ 0.17
COL17A1-202ENST00000369733 ZNF112Q9UJU3 913 aa16.1■□□□□ 0.17
COL17A1-202ENST00000369733 EFR3BQ9Y2G0 817 aa16.1■□□□□ 0.17
COL17A1-202ENST00000369733 AP3M1Q9Y2T2 418 aa16.1■□□□□ 0.17
COL17A1-202ENST00000369733 SLIT3O75094 1523 aa16.1■□□□□ 0.17
COL17A1-202ENST00000369733 PIPSLA2A3N6 862 aa16.1■□□□□ 0.17
COL17A1-202ENST00000369733 IDH3BO43837 385 aa16.1■□□□□ 0.17
COL17A1-202ENST00000369733 PPP1R11O60927 126 aaPredicted RBP16.1■□□□□ 0.17
COL17A1-202ENST00000369733 MTA2O94776 668 aa16.1■□□□□ 0.17
COL17A1-202ENST00000369733 THP07101 528 aa16.1■□□□□ 0.17
COL17A1-202ENST00000369733 CCNB1P14635 433 aa16.1■□□□□ 0.17
COL17A1-202ENST00000369733 DSG3P32926 999 aa16.1■□□□□ 0.17
COL17A1-202ENST00000369733 S100A3P33764 101 aa16.1■□□□□ 0.17
COL17A1-202ENST00000369733 ZNF57Q68EA5 555 aaPredicted RBP16.1■□□□□ 0.17
COL17A1-202ENST00000369733 CASP12Q6UXS9 341 aa16.1■□□□□ 0.17
COL17A1-202ENST00000369733 HPS1Q92902 700 aa16.1■□□□□ 0.17
COL17A1-202ENST00000369733 CHID1Q9BWS9 393 aa16.1■□□□□ 0.17
COL17A1-202ENST00000369733 SPATA16Q9BXB7 569 aa16.1■□□□□ 0.17
COL17A1-202ENST00000369733 ATP6AP2A0A1C7CYW4 349 aa16.09■□□□□ 0.17
COL17A1-202ENST00000369733 H3BNX3 289 aa16.09■□□□□ 0.17
COL17A1-202ENST00000369733 ATP6AP2O75787 350 aa16.09■□□□□ 0.17
COL17A1-202ENST00000369733 ALDH1A1P00352 501 aa16.09■□□□□ 0.17
COL17A1-202ENST00000369733 ABCB1P08183 1280 aaPredicted RBP16.09■□□□□ 0.17
COL17A1-202ENST00000369733 CDKN2BP42772 138 aa16.09■□□□□ 0.17
COL17A1-202ENST00000369733 RXRGP48443 463 aa16.09■□□□□ 0.17
COL17A1-202ENST00000369733 CLCN5P51795 746 aa16.09■□□□□ 0.17
COL17A1-202ENST00000369733 GPSM1Q86YR5 675 aa16.09■□□□□ 0.17
COL17A1-202ENST00000369733 SQORQ9Y6N5 450 aa16.09■□□□□ 0.17
COL17A1-202ENST00000369733 RAMP2O60895 175 aa16.09■□□□□ 0.17
COL17A1-202ENST00000369733 HGFP14210 728 aa16.09■□□□□ 0.17
COL17A1-202ENST00000369733 WDR4P57081 412 aaKnown RBP16.09■□□□□ 0.17
COL17A1-202ENST00000369733 COX10Q12887 443 aa16.09■□□□□ 0.17
COL17A1-202ENST00000369733 NPY5RQ15761 445 aa16.09■□□□□ 0.17
COL17A1-202ENST00000369733 RALGPS1Q5JS13 557 aa16.09■□□□□ 0.17
COL17A1-202ENST00000369733 REPS2Q8NFH8 660 aa16.09■□□□□ 0.17
COL17A1-202ENST00000369733 ZHX1-C8orf76Q96EF9 292 aa16.09■□□□□ 0.17
COL17A1-202ENST00000369733 TEKT5Q96M29 485 aa16.09■□□□□ 0.17
COL17A1-202ENST00000369733 OSBPL6Q9BZF3 934 aa16.09■□□□□ 0.17
COL17A1-202ENST00000369733 WDR12Q9GZL7 423 aaKnown RBP16.09■□□□□ 0.17
COL17A1-202ENST00000369733 SPRTNQ9H040 489 aaPredicted RBP16.09■□□□□ 0.17
COL17A1-202ENST00000369733 SIX2Q9NPC8 291 aa16.09■□□□□ 0.17
COL17A1-202ENST00000369733 SYNPO2Q9UMS6 1093 aa16.09■□□□□ 0.17
COL17A1-202ENST00000369733 BTRCQ9Y297 605 aa16.09■□□□□ 0.17
COL17A1-202ENST00000369733 ALOX5P09917 674 aa16.09■□□□□ 0.17
COL17A1-202ENST00000369733 ZNF286BP0CG31 522 aa16.09■□□□□ 0.17
COL17A1-202ENST00000369733 INSCQ1MX18 579 aa16.09■□□□□ 0.17
COL17A1-202ENST00000369733 TIMM50Q3ZCQ8 353 aa16.09■□□□□ 0.17
COL17A1-202ENST00000369733 INO80DQ53TQ3 878 aaPredicted RBP16.09■□□□□ 0.17
COL17A1-202ENST00000369733 ARHGAP36Q6ZRI8 547 aa16.09■□□□□ 0.17
COL17A1-202ENST00000369733 BANPQ8N9N5 519 aa16.09■□□□□ 0.17
COL17A1-202ENST00000369733 ZNF540Q8NDQ6 660 aa16.09■□□□□ 0.17
COL17A1-202ENST00000369733 STAG3L4Q8TBR4 150 aa16.09■□□□□ 0.17
COL17A1-202ENST00000369733 TRNAU1APQ9NX07 287 aaKnown RBP16.09■□□□□ 0.17
COL17A1-202ENST00000369733 ENOPH1Q9UHY7 261 aa16.09■□□□□ 0.17
COL17A1-202ENST00000369733 NUDT5Q9UKK9 219 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms