RNA–Protein interactions for RNA: ENST00000368979.6

SNX3-203, Transcript of sorting nexin 3, humanhuman

TSL 2

Gene SNX3, Length 1,537 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-203ENST00000368979 VPS51Q9UID3 782 aa24.26■■□□□ 1.47
SNX3-203ENST00000368979 A0A087WUV0 522 aaPredicted RBP24.25■■□□□ 1.47
SNX3-203ENST00000368979 NEDD8-MDP1E9PL57 170 aa24.25■■□□□ 1.47
SNX3-203ENST00000368979 CD70P32970 193 aa24.25■■□□□ 1.47
SNX3-203ENST00000368979 ADRA1AP35348 466 aa24.25■■□□□ 1.47
SNX3-203ENST00000368979 PLK1P53350 603 aa24.25■■□□□ 1.47
SNX3-203ENST00000368979 DLX2Q07687 328 aaPredicted RBP24.25■■□□□ 1.47
SNX3-203ENST00000368979 ITKQ08881 620 aa24.25■■□□□ 1.47
SNX3-203ENST00000368979 SLC12A1Q13621 1099 aa24.25■■□□□ 1.47
SNX3-203ENST00000368979 GRIN2CQ14957 1233 aa24.25■■□□□ 1.47
SNX3-203ENST00000368979 LY6G5CQ5SRR4 150 aa24.25■■□□□ 1.47
SNX3-203ENST00000368979 LINC00523Q86TU6 105 aa24.25■■□□□ 1.47
SNX3-203ENST00000368979 MPP5Q8N3R9 675 aa24.25■■□□□ 1.47
SNX3-203ENST00000368979 CINPQ9BW66 212 aaPredicted RBP24.25■■□□□ 1.47
SNX3-203ENST00000368979 BBS2Q9BXC9 721 aa24.25■■□□□ 1.47
SNX3-203ENST00000368979 VPS37BQ9H9H4 285 aa24.25■■□□□ 1.47
SNX3-203ENST00000368979 VPS45Q9NRW7 570 aa24.25■■□□□ 1.47
SNX3-203ENST00000368979 HAUS2Q9NVX0 235 aa24.25■■□□□ 1.47
SNX3-203ENST00000368979 CDH7Q9ULB5 785 aa24.25■■□□□ 1.47
SNX3-203ENST00000368979 KIF26AQ9ULI4 1882 aaPredicted RBP24.25■■□□□ 1.47
SNX3-203ENST00000368979 POU3F3P20264 500 aaPredicted RBP24.25■■□□□ 1.47
SNX3-203ENST00000368979 FCARP24071 287 aa24.25■■□□□ 1.47
SNX3-203ENST00000368979 SSTR1P30872 391 aa24.25■■□□□ 1.47
SNX3-203ENST00000368979 CYTH1Q15438 398 aa24.25■■□□□ 1.47
SNX3-203ENST00000368979 PLEKHG6Q3KR16 790 aa24.25■■□□□ 1.47
SNX3-203ENST00000368979 HSP90B2PQ58FF3 399 aa24.25■■□□□ 1.47
SNX3-203ENST00000368979 ATAT1Q5SQI0 421 aa24.25■■□□□ 1.47
SNX3-203ENST00000368979 PALM2Q8IXS6 379 aa24.25■■□□□ 1.47
SNX3-203ENST00000368979 ZNF557Q8N988 423 aaPredicted RBP24.25■■□□□ 1.47
SNX3-203ENST00000368979 IPMKQ8NFU5 416 aa24.25■■□□□ 1.47
SNX3-203ENST00000368979 BPIFB1Q8TDL5 484 aa24.25■■□□□ 1.47
SNX3-203ENST00000368979 MRGPRX2Q96LB1 330 aa24.25■■□□□ 1.47
SNX3-203ENST00000368979 EBNA1BP2Q99848 306 aaKnown RBP24.25■■□□□ 1.47
SNX3-203ENST00000368979 TBL1YQ9BQ87 522 aa24.25■■□□□ 1.47
SNX3-203ENST00000368979 C2orf49Q9BVC5 232 aaPredicted RBP24.25■■□□□ 1.47
SNX3-203ENST00000368979 PIH1D1Q9NWS0 290 aaKnown RBP24.25■■□□□ 1.47
SNX3-203ENST00000368979 DUS2Q9NX74 493 aaKnown RBP24.25■■□□□ 1.47
SNX3-203ENST00000368979 OGFRQ9NZT2 677 aa24.25■■□□□ 1.47
SNX3-203ENST00000368979 SDR42E2A6NKP2 422 aa24.24■■□□□ 1.47
SNX3-203ENST00000368979 CPP00450 1065 aa24.24■■□□□ 1.47
SNX3-203ENST00000368979 TYRP14679 529 aa24.24■■□□□ 1.47
SNX3-203ENST00000368979 MGAT1P26572 445 aa24.24■■□□□ 1.47
SNX3-203ENST00000368979 HLA-FP30511 346 aa24.24■■□□□ 1.47
SNX3-203ENST00000368979 CD86P42081 329 aa24.24■■□□□ 1.47
SNX3-203ENST00000368979 SESN2P58004 480 aaPredicted RBP24.24■■□□□ 1.47
SNX3-203ENST00000368979 SKOR1P84550 965 aa24.24■■□□□ 1.47
SNX3-203ENST00000368979 IHHQ14623 411 aa24.24■■□□□ 1.47
SNX3-203ENST00000368979 COL19A1Q14993 1142 aa24.24■■□□□ 1.47
SNX3-203ENST00000368979 EML3Q32P44 896 aa24.24■■□□□ 1.47
SNX3-203ENST00000368979 INO80DQ53TQ3 878 aaPredicted RBP24.24■■□□□ 1.47
SNX3-203ENST00000368979 CES5AQ6NT32 575 aa24.24■■□□□ 1.47
SNX3-203ENST00000368979 CAPN12Q6ZSI9 719 aa24.24■■□□□ 1.47
SNX3-203ENST00000368979 ACDQ96AP0 544 aa24.24■■□□□ 1.47
SNX3-203ENST00000368979 PLAC1Q9HBJ0 212 aa24.24■■□□□ 1.47
SNX3-203ENST00000368979 INTS6Q9UL03 887 aaKnown RBP24.24■■□□□ 1.47
SNX3-203ENST00000368979 DENND4AQ7Z401 1863 aa24.24■■□□□ 1.47
SNX3-203ENST00000368979 AP3B1O00203 1094 aa24.23■■□□□ 1.47
SNX3-203ENST00000368979 PMPCBO75439 489 aa24.23■■□□□ 1.47
SNX3-203ENST00000368979 SPAG6O75602 509 aa24.23■■□□□ 1.47
SNX3-203ENST00000368979 PHBP35232 272 aa24.23■■□□□ 1.47
SNX3-203ENST00000368979 CDH17Q12864 832 aa24.23■■□□□ 1.47
SNX3-203ENST00000368979 ADGRE1Q14246 886 aa24.23■■□□□ 1.47
SNX3-203ENST00000368979 STAT4Q14765 748 aa24.23■■□□□ 1.47
SNX3-203ENST00000368979 LINGO4Q6UY18 593 aa24.23■■□□□ 1.47
SNX3-203ENST00000368979 KRT222Q8N1A0 295 aa24.23■■□□□ 1.47
SNX3-203ENST00000368979 SEMA3CQ99985 751 aa24.23■■□□□ 1.47
SNX3-203ENST00000368979 APOL2Q9BQE5 337 aa24.23■■□□□ 1.47
SNX3-203ENST00000368979 FICDQ9BVA6 458 aa24.23■■□□□ 1.47
SNX3-203ENST00000368979 ROPN1BQ9BZX4 212 aaPredicted RBP24.23■■□□□ 1.47
SNX3-203ENST00000368979 ROPN1Q9HAT0 212 aaPredicted RBP24.23■■□□□ 1.47
SNX3-203ENST00000368979 TMBIM4Q9HC24 238 aa24.23■■□□□ 1.47
SNX3-203ENST00000368979 ABCB8Q9NUT2 735 aa24.23■■□□□ 1.47
SNX3-203ENST00000368979 SYBUQ9NX95 663 aa24.23■■□□□ 1.47
SNX3-203ENST00000368979 CLDND1Q9NY35 253 aa24.23■■□□□ 1.47
SNX3-203ENST00000368979 ZC3H7BQ9UGR2 993 aaKnown RBP24.23■■□□□ 1.47
SNX3-203ENST00000368979 CXorf51AA0A1B0GTR3 108 aa24.22■■□□□ 1.47
SNX3-203ENST00000368979 HEPACAM2A8MVW5 462 aa24.22■■□□□ 1.47
SNX3-203ENST00000368979 TCEA3O75764 348 aa24.22■■□□□ 1.47
SNX3-203ENST00000368979 TMCC1O94876 653 aa24.22■■□□□ 1.47
SNX3-203ENST00000368979 AGTP01019 485 aa24.22■■□□□ 1.47
SNX3-203ENST00000368979 CYP17A1P05093 508 aa24.22■■□□□ 1.47
SNX3-203ENST00000368979 CR2P20023 1033 aa24.22■■□□□ 1.47
SNX3-203ENST00000368979 WNT3AP56704 352 aa24.22■■□□□ 1.47
SNX3-203ENST00000368979 DHCR24Q15392 516 aa24.22■■□□□ 1.47
SNX3-203ENST00000368979 SLC14A2Q15849 920 aa24.22■■□□□ 1.47
SNX3-203ENST00000368979 KRT71Q3SY84 523 aa24.22■■□□□ 1.47
SNX3-203ENST00000368979 PITRM1Q5JRX3 1037 aa24.22■■□□□ 1.47
SNX3-203ENST00000368979 ASTLQ6HA08 431 aaPredicted RBP24.22■■□□□ 1.47
SNX3-203ENST00000368979 RANBP10Q6VN20 620 aa24.22■■□□□ 1.47
SNX3-203ENST00000368979 C3orf62Q6ZUJ4 267 aa24.22■■□□□ 1.47
SNX3-203ENST00000368979 CROCCP2Q86T23 111 aa24.22■■□□□ 1.47
SNX3-203ENST00000368979 GOLGA6L1Q8N7Z2 621 aa24.22■■□□□ 1.47
SNX3-203ENST00000368979 DNAAF3Q8N9W5 541 aa24.22■■□□□ 1.47
SNX3-203ENST00000368979 STAMBPL1Q96FJ0 436 aa24.22■■□□□ 1.47
SNX3-203ENST00000368979 ASIC4Q96FT7 647 aa24.22■■□□□ 1.47
SNX3-203ENST00000368979 PKNOX2Q96KN3 472 aa24.22■■□□□ 1.47
SNX3-203ENST00000368979 FSD1LQ9BXM9 530 aa24.22■■□□□ 1.47
SNX3-203ENST00000368979 MAD1L1Q9Y6D9 718 aa24.22■■□□□ 1.47
SNX3-203ENST00000368979 TTC24A2A3L6 582 aaPredicted RBP24.21■■□□□ 1.47
SNX3-203ENST00000368979 GOLGA8KD6RF30 607 aa24.21■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms