RNA–Protein interactions for RNA: ENST00000366942.3

USH2A-202, Transcript of usherin, humanhuman

TSL 1 (best) BASIC

Gene USH2A, Length 6,320 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-202ENST00000366942 CEP104O60308 925 aa4.15□□□□□ -1.75
USH2A-202ENST00000366942 TRAPPC6AO75865 159 aa4.15□□□□□ -1.75
USH2A-202ENST00000366942 POP4O95707 220 aaKnown RBP4.15□□□□□ -1.75
USH2A-202ENST00000366942 P04436 131 aa4.15□□□□□ -1.75
USH2A-202ENST00000366942 KRT8P05787 483 aa4.15□□□□□ -1.75
USH2A-202ENST00000366942 FBLN1P23142 703 aa4.15□□□□□ -1.75
USH2A-202ENST00000366942 GLDCP23378 1020 aa4.15□□□□□ -1.75
USH2A-202ENST00000366942 PGDP52209 483 aa4.15□□□□□ -1.75
USH2A-202ENST00000366942 PMS2P54278 862 aa4.15□□□□□ -1.75
USH2A-202ENST00000366942 PCBP4P57723 403 aaKnown RBP4.15□□□□□ -1.75
USH2A-202ENST00000366942 SNAP25P60880 206 aa4.15□□□□□ -1.75
USH2A-202ENST00000366942 BST2Q10589 180 aaKnown RBP4.15□□□□□ -1.75
USH2A-202ENST00000366942 PTPRCAPQ14761 206 aa4.15□□□□□ -1.75
USH2A-202ENST00000366942 PTPN21Q16825 1174 aa4.15□□□□□ -1.75
USH2A-202ENST00000366942 ADCK5Q3MIX3 580 aa4.15□□□□□ -1.75
USH2A-202ENST00000366942 TMEM198Q66K66 360 aa4.15□□□□□ -1.75
USH2A-202ENST00000366942 BICRALQ6AI39 1079 aa4.15□□□□□ -1.75
USH2A-202ENST00000366942 KIAA1211LQ6NV74 962 aa4.15□□□□□ -1.75
USH2A-202ENST00000366942 RUFY3Q7L099 469 aa4.15□□□□□ -1.75
USH2A-202ENST00000366942 SLC29A4Q7RTT9 530 aa4.15□□□□□ -1.75
USH2A-202ENST00000366942 ABHD11Q8NFV4 315 aa4.15□□□□□ -1.75
USH2A-202ENST00000366942 DDX55Q8NHQ9 600 aaKnown RBP eCLIP4.15□□□□□ -1.75
USH2A-202ENST00000366942 SLC5A5Q92911 643 aa4.15□□□□□ -1.75
USH2A-202ENST00000366942 ERLEC1Q96DZ1 483 aa4.15□□□□□ -1.75
USH2A-202ENST00000366942 RBM18Q96H35 190 aaKnown RBP4.15□□□□□ -1.75
USH2A-202ENST00000366942 GPR174Q9BXC1 333 aa4.15□□□□□ -1.75
USH2A-202ENST00000366942 RSPH9Q9H1X1 276 aaPredicted RBP4.15□□□□□ -1.75
USH2A-202ENST00000366942 TMEM245Q9H330 911 aa4.15□□□□□ -1.75
USH2A-202ENST00000366942 RIBC2Q9H4K1 309 aa4.15□□□□□ -1.75
USH2A-202ENST00000366942 ZNF556Q9HAH1 456 aa4.15□□□□□ -1.75
USH2A-202ENST00000366942 MORF4L1Q9UBU8 362 aa4.15□□□□□ -1.75
USH2A-202ENST00000366942 CHORDC1Q9UHD1 332 aaPredicted RBP4.15□□□□□ -1.75
USH2A-202ENST00000366942 E7EWF7 191 aa4.15□□□□□ -1.75
USH2A-202ENST00000366942 TK2O00142 265 aa4.15□□□□□ -1.75
USH2A-202ENST00000366942 TFECO14948 347 aaPredicted RBP4.15□□□□□ -1.75
USH2A-202ENST00000366942 TBL1XO60907 577 aa4.15□□□□□ -1.75
USH2A-202ENST00000366942 SKAP2O75563 359 aaPredicted RBP4.15□□□□□ -1.75
USH2A-202ENST00000366942 TRUB2O95900 331 aaKnown RBP4.15□□□□□ -1.75
USH2A-202ENST00000366942 KRT6AP02538 564 aa4.15□□□□□ -1.75
USH2A-202ENST00000366942 KRT6BP04259 564 aa4.15□□□□□ -1.75
USH2A-202ENST00000366942 ITPKBP27987 946 aa4.15□□□□□ -1.75
USH2A-202ENST00000366942 SLC26A3P40879 764 aa4.15□□□□□ -1.75
USH2A-202ENST00000366942 KRT6CP48668 564 aa4.15□□□□□ -1.75
USH2A-202ENST00000366942 ALDH9A1P49189 494 aa4.15□□□□□ -1.75
USH2A-202ENST00000366942 CAPZA1P52907 286 aa4.15□□□□□ -1.75
USH2A-202ENST00000366942 UBE2NP61088 152 aaKnown RBP4.15□□□□□ -1.75
USH2A-202ENST00000366942 PTP4A2Q12974 167 aa4.15□□□□□ -1.75
USH2A-202ENST00000366942 CAMK2DQ13557 499 aa4.15□□□□□ -1.75
USH2A-202ENST00000366942 ALX1Q15699 326 aa4.15□□□□□ -1.75
USH2A-202ENST00000366942 SLC44A4Q53GD3 710 aa4.15□□□□□ -1.75
USH2A-202ENST00000366942 METTL21CQ5VZV1 264 aa4.15□□□□□ -1.75
USH2A-202ENST00000366942 ASTLQ6HA08 431 aaPredicted RBP4.15□□□□□ -1.75
USH2A-202ENST00000366942 UGT2A3Q6UWM9 527 aa4.15□□□□□ -1.75
USH2A-202ENST00000366942 ABHD12BQ7Z5M8 362 aaPredicted RBP4.15□□□□□ -1.75
USH2A-202ENST00000366942 MON1AQ86VX9 555 aa4.15□□□□□ -1.75
USH2A-202ENST00000366942 RP9Q8TA86 221 aaKnown RBP4.15□□□□□ -1.75
USH2A-202ENST00000366942 KLHDC4Q8TBB5 520 aa4.15□□□□□ -1.75
USH2A-202ENST00000366942 SLC39A7Q92504 469 aa4.15□□□□□ -1.75
USH2A-202ENST00000366942 CASD1Q96PB1 797 aa4.15□□□□□ -1.75
USH2A-202ENST00000366942 PI4K2AQ9BTU6 479 aa4.15□□□□□ -1.75
USH2A-202ENST00000366942 THUMPD3Q9BV44 507 aaKnown RBP4.15□□□□□ -1.75
USH2A-202ENST00000366942 RHBGQ9H310 441 aa4.15□□□□□ -1.75
USH2A-202ENST00000366942 ANKHQ9HCJ1 492 aa4.15□□□□□ -1.75
USH2A-202ENST00000366942 ERGIC3Q9Y282 383 aa4.15□□□□□ -1.75
USH2A-202ENST00000366942 NEXMIFQ5QGS0 1516 aa4.15□□□□□ -1.75
USH2A-202ENST00000366942 A0A0G2JLL6 359 aaPredicted RBP4.15□□□□□ -1.75
USH2A-202ENST00000366942 KLK10O43240 276 aa4.15□□□□□ -1.75
USH2A-202ENST00000366942 LDB2O43679 373 aa4.15□□□□□ -1.75
USH2A-202ENST00000366942 EIF2S3P41091 472 aaKnown RBP4.15□□□□□ -1.75
USH2A-202ENST00000366942 PNOCQ13519 176 aa4.15□□□□□ -1.75
USH2A-202ENST00000366942 MYBPC2Q14324 1141 aa4.15□□□□□ -1.75
USH2A-202ENST00000366942 KNOP1Q1ED39 458 aaKnown RBP4.15□□□□□ -1.75
USH2A-202ENST00000366942 MOB2Q70IA6 237 aa4.15□□□□□ -1.75
USH2A-202ENST00000366942 ERMP1Q7Z2K6 904 aa4.15□□□□□ -1.75
USH2A-202ENST00000366942 PRRT2Q7Z6L0 340 aaPredicted RBP4.15□□□□□ -1.75
USH2A-202ENST00000366942 TMEM200AQ86VY9 491 aa4.15□□□□□ -1.75
USH2A-202ENST00000366942 UNC93AQ86WB7 457 aa4.15□□□□□ -1.75
USH2A-202ENST00000366942 TMEM151BQ8IW70 566 aa4.15□□□□□ -1.75
USH2A-202ENST00000366942 NEK7Q8TDX7 302 aa4.15□□□□□ -1.75
USH2A-202ENST00000366942 KCTD4Q8WVF5 259 aa4.15□□□□□ -1.75
USH2A-202ENST00000366942 MKL1Q969V6 931 aa4.15□□□□□ -1.75
USH2A-202ENST00000366942 NSUN4Q96CB9 384 aaKnown RBP4.15□□□□□ -1.75
USH2A-202ENST00000366942 CYFIP2Q96F07 1278 aa4.15□□□□□ -1.75
USH2A-202ENST00000366942 NARS2Q96I59 477 aaKnown RBP4.15□□□□□ -1.75
USH2A-202ENST00000366942 PUS3Q9BZE2 481 aaKnown RBP4.15□□□□□ -1.75
USH2A-202ENST00000366942 GANQ9H2C0 597 aa4.15□□□□□ -1.75
USH2A-202ENST00000366942 BLZF1Q9H2G9 400 aa4.15□□□□□ -1.75
USH2A-202ENST00000366942 SRMSQ9H3Y6 488 aa4.15□□□□□ -1.75
USH2A-202ENST00000366942 ZBTB40Q9NUA8 1239 aa4.15□□□□□ -1.75
USH2A-202ENST00000366942 IMP3Q9NV31 184 aaKnown RBP4.15□□□□□ -1.75
USH2A-202ENST00000366942 TAS2R16Q9NYV7 291 aa4.15□□□□□ -1.75
USH2A-202ENST00000366942 POLLQ9UGP5 575 aa4.15□□□□□ -1.75
USH2A-202ENST00000366942 CTNND2Q9UQB3 1225 aa4.15□□□□□ -1.75
USH2A-202ENST00000366942 TRGV8A0A0C4DH27 118 aa4.14□□□□□ -1.75
USH2A-202ENST00000366942 A0A1W2PPH5 198 aa4.14□□□□□ -1.75
USH2A-202ENST00000366942 GTPBP10A4D1E9 387 aaKnown RBP4.14□□□□□ -1.75
USH2A-202ENST00000366942 ZRANB2O95218 330 aaKnown RBP eCLIP4.14□□□□□ -1.75
USH2A-202ENST00000366942 ECDO95905 644 aaPredicted RBP4.14□□□□□ -1.75
USH2A-202ENST00000366942 PAHP00439 452 aa4.14□□□□□ -1.75
USH2A-202ENST00000366942 ALDOBP05062 364 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms