RNA–Protein interactions for RNA: ENST00000366286.6

YBX3-203, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 704 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-203ENST00000366286 LUC7L2Q9Y383 392 aaKnown RBP10.56□□□□□ -0.72
YBX3-203ENST00000366286 BZW2Q9Y6E2 419 aaKnown RBP10.56□□□□□ -0.72
YBX3-203ENST00000366286 TDRD6O60522 2096 aaKnown RBP10.55□□□□□ -0.72
YBX3-203ENST00000366286 SPAARA0A1B0GVQ0 90 aa10.55□□□□□ -0.72
YBX3-203ENST00000366286 ZSCAN5CA6NGD5 496 aaPredicted RBP10.55□□□□□ -0.72
YBX3-203ENST00000366286 RASA4BC9J798 803 aa10.55□□□□□ -0.72
YBX3-203ENST00000366286 EEF2KO00418 725 aaKnown RBP10.55□□□□□ -0.72
YBX3-203ENST00000366286 VILLO15195 856 aa10.55□□□□□ -0.72
YBX3-203ENST00000366286 RASA4O43374 803 aa10.55□□□□□ -0.72
YBX3-203ENST00000366286 KDELR3O43731 214 aa10.55□□□□□ -0.72
YBX3-203ENST00000366286 SH3BP5O60239 455 aa10.55□□□□□ -0.72
YBX3-203ENST00000366286 LRCH4O75427 683 aa10.55□□□□□ -0.72
YBX3-203ENST00000366286 RNF8O76064 485 aa10.55□□□□□ -0.72
YBX3-203ENST00000366286 TMCC1O94876 653 aa10.55□□□□□ -0.72
YBX3-203ENST00000366286 WNT1P04628 370 aa10.55□□□□□ -0.72
YBX3-203ENST00000366286 TPM3P06753 285 aa10.55□□□□□ -0.72
YBX3-203ENST00000366286 ITGB7P26010 798 aa10.55□□□□□ -0.72
YBX3-203ENST00000366286 MIPP30301 263 aa10.55□□□□□ -0.72
YBX3-203ENST00000366286 MAT2AP31153 395 aaKnown RBP10.55□□□□□ -0.72
YBX3-203ENST00000366286 CASP14P31944 242 aa10.55□□□□□ -0.72
YBX3-203ENST00000366286 HTR7P34969 479 aa10.55□□□□□ -0.72
YBX3-203ENST00000366286 CTSKP43235 329 aa10.55□□□□□ -0.72
YBX3-203ENST00000366286 C21orf59P57076 290 aa10.55□□□□□ -0.72
YBX3-203ENST00000366286 FAM193AP78312 1265 aa10.55□□□□□ -0.72
YBX3-203ENST00000366286 CARD16Q5EG05 197 aa10.55□□□□□ -0.72
YBX3-203ENST00000366286 ERMARDQ5T6L9 678 aa10.55□□□□□ -0.72
YBX3-203ENST00000366286 ERN2Q76MJ5 926 aaKnown RBP10.55□□□□□ -0.72
YBX3-203ENST00000366286 ZNF354CQ86Y25 554 aa10.55□□□□□ -0.72
YBX3-203ENST00000366286 OR6K2Q8NGY2 324 aa10.55□□□□□ -0.72
YBX3-203ENST00000366286 ISG20Q96AZ6 181 aaKnown RBP10.55□□□□□ -0.72
YBX3-203ENST00000366286 KCTD15Q96SI1 283 aaPredicted RBP10.55□□□□□ -0.72
YBX3-203ENST00000366286 HEPHQ9BQS7 1158 aa10.55□□□□□ -0.72
YBX3-203ENST00000366286 THAP2Q9H0W7 228 aa10.55□□□□□ -0.72
YBX3-203ENST00000366286 MRPL47Q9HD33 250 aaKnown RBP10.55□□□□□ -0.72
YBX3-203ENST00000366286 TM7SF3Q9NS93 570 aa10.55□□□□□ -0.72
YBX3-203ENST00000366286 ARHGAP20Q9P2F6 1191 aa10.55□□□□□ -0.72
YBX3-203ENST00000366286 ANGPTL2Q9UKU9 493 aa10.55□□□□□ -0.72
YBX3-203ENST00000366286 A0A087X0T9 212 aa10.54□□□□□ -0.72
YBX3-203ENST00000366286 A0A1W2PR77 199 aa10.54□□□□□ -0.72
YBX3-203ENST00000366286 EIF3CLB5ME19 914 aaKnown RBP10.54□□□□□ -0.72
YBX3-203ENST00000366286 H0Y8X5 98 aa10.54□□□□□ -0.72
YBX3-203ENST00000366286 KCNK3O14649 394 aa10.54□□□□□ -0.72
YBX3-203ENST00000366286 BUB1O43683 1085 aa10.54□□□□□ -0.72
YBX3-203ENST00000366286 PRPSAP2O60256 369 aa10.54□□□□□ -0.72
YBX3-203ENST00000366286 RNGTTO60942 597 aaKnown RBP10.54□□□□□ -0.72
YBX3-203ENST00000366286 GSRP00390 522 aa10.54□□□□□ -0.72
YBX3-203ENST00000366286 FAM228BP0C875 321 aa10.54□□□□□ -0.72
YBX3-203ENST00000366286 CD38P28907 300 aa10.54□□□□□ -0.72
YBX3-203ENST00000366286 GKP32189 559 aa10.54□□□□□ -0.72
YBX3-203ENST00000366286 CCT8P50990 548 aa10.54□□□□□ -0.72
YBX3-203ENST00000366286 NEK3P51956 506 aa10.54□□□□□ -0.72
YBX3-203ENST00000366286 YBEYP58557 167 aaPredicted RBP10.54□□□□□ -0.72
YBX3-203ENST00000366286 SIM1P81133 766 aaPredicted RBP10.54□□□□□ -0.72
YBX3-203ENST00000366286 IL9RQ01113 521 aa10.54□□□□□ -0.72
YBX3-203ENST00000366286 FOXC1Q12948 553 aa10.54□□□□□ -0.72
YBX3-203ENST00000366286 SERINC3Q13530 473 aa10.54□□□□□ -0.72
YBX3-203ENST00000366286 ZNF423Q2M1K9 1284 aa10.54□□□□□ -0.72
YBX3-203ENST00000366286 SMTNL2Q2TAL5 461 aa10.54□□□□□ -0.72
YBX3-203ENST00000366286 PARP15Q460N3 678 aa10.54□□□□□ -0.72
YBX3-203ENST00000366286 PPP6R3Q5H9R7 873 aaPredicted RBP10.54□□□□□ -0.72
YBX3-203ENST00000366286 ATXN7L2Q5T6C5 722 aaPredicted RBP10.54□□□□□ -0.72
YBX3-203ENST00000366286 NAPEPLDQ6IQ20 393 aa10.54□□□□□ -0.72
YBX3-203ENST00000366286 PARS2Q7L3T8 475 aaKnown RBP10.54□□□□□ -0.72
YBX3-203ENST00000366286 PRPF39Q86UA1 669 aaKnown RBP10.54□□□□□ -0.72
YBX3-203ENST00000366286 UMODL1-AS1Q8N2C9 162 aa10.54□□□□□ -0.72
YBX3-203ENST00000366286 RYBPQ8N488 228 aaPredicted RBP10.54□□□□□ -0.72
YBX3-203ENST00000366286 NETO2Q8NC67 525 aa10.54□□□□□ -0.72
YBX3-203ENST00000366286 RNF214Q8ND24 703 aa10.54□□□□□ -0.72
YBX3-203ENST00000366286 OR2AP1Q8NGE2 309 aa10.54□□□□□ -0.72
YBX3-203ENST00000366286 EIF3CQ99613 913 aaKnown RBP10.54□□□□□ -0.72
YBX3-203ENST00000366286 HDAC8Q9BY41 377 aa10.54□□□□□ -0.72
YBX3-203ENST00000366286 LRRC19Q9H756 370 aa10.54□□□□□ -0.72
YBX3-203ENST00000366286 HECAQ9UBI9 543 aaPredicted RBP10.54□□□□□ -0.72
YBX3-203ENST00000366286 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.54□□□□□ -0.72
YBX3-203ENST00000366286 A0A1W2PQU0 124 aa10.53□□□□□ -0.72
YBX3-203ENST00000366286 KRIT1O00522 736 aa10.53□□□□□ -0.72
YBX3-203ENST00000366286 FLRT2O43155 660 aa10.53□□□□□ -0.72
YBX3-203ENST00000366286 CBFA2T2O43439 604 aa10.53□□□□□ -0.72
YBX3-203ENST00000366286 CBFA2T3O75081 653 aa10.53□□□□□ -0.72
YBX3-203ENST00000366286 UGT2B4P06133 528 aa10.53□□□□□ -0.72
YBX3-203ENST00000366286 ADRB3P13945 408 aa10.53□□□□□ -0.72
YBX3-203ENST00000366286 TCF4P15884 667 aa10.53□□□□□ -0.72
YBX3-203ENST00000366286 PRLRP16471 622 aa10.53□□□□□ -0.72
YBX3-203ENST00000366286 IL1R2P27930 398 aa10.53□□□□□ -0.72
YBX3-203ENST00000366286 PCK1P35558 622 aa10.53□□□□□ -0.72
YBX3-203ENST00000366286 NUDT1P36639 197 aa10.53□□□□□ -0.72
YBX3-203ENST00000366286 RHOAP61586 193 aa10.53□□□□□ -0.72
YBX3-203ENST00000366286 SNRPD1P62314 119 aaKnown RBP10.53□□□□□ -0.72
YBX3-203ENST00000366286 SHC2P98077 582 aa10.53□□□□□ -0.72
YBX3-203ENST00000366286 CCDC15Q0P6D6 951 aa10.53□□□□□ -0.72
YBX3-203ENST00000366286 TRIM14Q14142 442 aa10.53□□□□□ -0.72
YBX3-203ENST00000366286 NFKBIBQ15653 356 aa10.53□□□□□ -0.72
YBX3-203ENST00000366286 ZNF284Q2VY69 593 aa10.53□□□□□ -0.72
YBX3-203ENST00000366286 SETMARQ53H47 684 aaPredicted RBP10.53□□□□□ -0.72
YBX3-203ENST00000366286 SLC45A4Q5BKX6 768 aa10.53□□□□□ -0.72
YBX3-203ENST00000366286 SPECC1LQ69YQ0 1117 aa10.53□□□□□ -0.72
YBX3-203ENST00000366286 RFX8Q6ZV50 586 aa10.53□□□□□ -0.72
YBX3-203ENST00000366286 HORMAD1Q86X24 394 aa10.53□□□□□ -0.72
YBX3-203ENST00000366286 PSTKQ8IV42 348 aaKnown RBP10.53□□□□□ -0.72
YBX3-203ENST00000366286 PLPP6Q8IY26 295 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms