RNA–Protein interactions for RNA: ENST00000365559.1

RNU4-48P-201, Transcript of RNA, U4 small nuclear 48, pseudogene, humanhuman

BASIC

Gene RNU4-48P, Length 182 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-48P-201ENST00000365559 LUZP4Q9P127 313 aa3.42□□□□□ -1.86
RNU4-48P-201ENST00000365559 FBXO40Q9UH90 709 aa3.42□□□□□ -1.86
RNU4-48P-201ENST00000365559 PCDHA7Q9UN72 937 aa3.42□□□□□ -1.86
RNU4-48P-201ENST00000365559 CLDN16Q9Y5I7 305 aa3.42□□□□□ -1.86
RNU4-48P-201ENST00000365559 RAI2Q9Y5P3 530 aa3.42□□□□□ -1.86
RNU4-48P-201ENST00000365559 SH2D7A6NKC9 451 aaPredicted RBP3.41□□□□□ -1.86
RNU4-48P-201ENST00000365559 FAM157AC9JC47 383 aa3.41□□□□□ -1.86
RNU4-48P-201ENST00000365559 SPRY3O43610 288 aa3.41□□□□□ -1.86
RNU4-48P-201ENST00000365559 LIASO43766 372 aa3.41□□□□□ -1.86
RNU4-48P-201ENST00000365559 SERPINC1P01008 464 aa3.41□□□□□ -1.86
RNU4-48P-201ENST00000365559 ENO3P13929 434 aaPredicted RBP3.41□□□□□ -1.86
RNU4-48P-201ENST00000365559 HSD3B1P14060 373 aa3.41□□□□□ -1.86
RNU4-48P-201ENST00000365559 GNLYP22749 145 aa3.41□□□□□ -1.86
RNU4-48P-201ENST00000365559 YWHAQP27348 245 aa3.41□□□□□ -1.86
RNU4-48P-201ENST00000365559 ABATP80404 500 aa3.41□□□□□ -1.86
RNU4-48P-201ENST00000365559 ROR2Q01974 943 aaKnown RBP3.41□□□□□ -1.86
RNU4-48P-201ENST00000365559 SLC18A2Q05940 514 aa3.41□□□□□ -1.86
RNU4-48P-201ENST00000365559 HNF4GQ14541 408 aa3.41□□□□□ -1.86
RNU4-48P-201ENST00000365559 ZNF284Q2VY69 593 aa3.41□□□□□ -1.86
RNU4-48P-201ENST00000365559 DNTTIP2Q5QJE6 756 aaKnown RBP3.41□□□□□ -1.86
RNU4-48P-201ENST00000365559 FNBP1LQ5T0N5 605 aa3.41□□□□□ -1.86
RNU4-48P-201ENST00000365559 BBS12Q6ZW61 710 aa3.41□□□□□ -1.86
RNU4-48P-201ENST00000365559 GHDCQ8N2G8 530 aa3.41□□□□□ -1.86
RNU4-48P-201ENST00000365559 RASSF8Q8NHQ8 419 aa3.41□□□□□ -1.86
RNU4-48P-201ENST00000365559 SLC35F5Q8WV83 523 aa3.41□□□□□ -1.86
RNU4-48P-201ENST00000365559 HSPH1Q92598 858 aa3.41□□□□□ -1.86
RNU4-48P-201ENST00000365559 MIB2Q96AX9 1013 aa3.41□□□□□ -1.86
RNU4-48P-201ENST00000365559 ZNF479Q96JC4 524 aa3.41□□□□□ -1.86
RNU4-48P-201ENST00000365559 LYZL4Q96KX0 146 aa3.41□□□□□ -1.86
RNU4-48P-201ENST00000365559 MARK4Q96L34 752 aa3.41□□□□□ -1.86
RNU4-48P-201ENST00000365559 SF3B5Q9BWJ5 86 aaKnown RBP3.41□□□□□ -1.86
RNU4-48P-201ENST00000365559 PHF7Q9BWX1 381 aaPredicted RBP3.41□□□□□ -1.86
RNU4-48P-201ENST00000365559 WDR6Q9NNW5 1121 aaKnown RBP3.41□□□□□ -1.86
RNU4-48P-201ENST00000365559 IGKV2D-30A0A075B6S6 120 aa3.4□□□□□ -1.87
RNU4-48P-201ENST00000365559 OR6C75A6NL08 312 aa3.4□□□□□ -1.87
RNU4-48P-201ENST00000365559 MS4A18H0YCH9 400 aa3.4□□□□□ -1.87
RNU4-48P-201ENST00000365559 SLC25A17O43808 307 aa3.4□□□□□ -1.87
RNU4-48P-201ENST00000365559 TSPAN3O60637 253 aa3.4□□□□□ -1.87
RNU4-48P-201ENST00000365559 CHRM4P08173 479 aa3.4□□□□□ -1.87
RNU4-48P-201ENST00000365559 ITGB6P18564 788 aa3.4□□□□□ -1.87
RNU4-48P-201ENST00000365559 CNTFP26441 200 aa3.4□□□□□ -1.87
RNU4-48P-201ENST00000365559 CCKARP32238 428 aa3.4□□□□□ -1.87
RNU4-48P-201ENST00000365559 ARSFP54793 590 aa3.4□□□□□ -1.87
RNU4-48P-201ENST00000365559 UBE3AQ05086 875 aa3.4□□□□□ -1.87
RNU4-48P-201ENST00000365559 CHRNDQ07001 517 aa3.4□□□□□ -1.87
RNU4-48P-201ENST00000365559 Q0VFX4 171 aa3.4□□□□□ -1.87
RNU4-48P-201ENST00000365559 WDR45BQ5MNZ6 344 aa3.4□□□□□ -1.87
RNU4-48P-201ENST00000365559 OTUD1Q5VV17 481 aaPredicted RBP3.4□□□□□ -1.87
RNU4-48P-201ENST00000365559 ATG9BQ674R7 924 aa3.4□□□□□ -1.87
RNU4-48P-201ENST00000365559 ATG16L1Q676U5 607 aa3.4□□□□□ -1.87
RNU4-48P-201ENST00000365559 CYP26C1Q6V0L0 522 aa3.4□□□□□ -1.87
RNU4-48P-201ENST00000365559 FAM83HQ6ZRV2 1179 aaPredicted RBP3.4□□□□□ -1.87
RNU4-48P-201ENST00000365559 LRRTM4Q86VH4 590 aa3.4□□□□□ -1.87
RNU4-48P-201ENST00000365559 FBXL14Q8N1E6 418 aa3.4□□□□□ -1.87
RNU4-48P-201ENST00000365559 TEX45Q8NA69 505 aa3.4□□□□□ -1.87
RNU4-48P-201ENST00000365559 LSM14AQ8ND56 463 aaKnown RBP3.4□□□□□ -1.87
RNU4-48P-201ENST00000365559 DNAAF1Q8NEP3 725 aa3.4□□□□□ -1.87
RNU4-48P-201ENST00000365559 MYRIPQ8NFW9 859 aa3.4□□□□□ -1.87
RNU4-48P-201ENST00000365559 GPT2Q8TD30 523 aa3.4□□□□□ -1.87
RNU4-48P-201ENST00000365559 MORC4Q8TE76 937 aa3.4□□□□□ -1.87
RNU4-48P-201ENST00000365559 RAB40AQ8WXH6 277 aa3.4□□□□□ -1.87
RNU4-48P-201ENST00000365559 ADAMTS14Q8WXS8 1223 aa3.4□□□□□ -1.87
RNU4-48P-201ENST00000365559 CNOT9Q92600 299 aaKnown RBP3.4□□□□□ -1.87
RNU4-48P-201ENST00000365559 EVPLQ92817 2033 aa3.4□□□□□ -1.87
RNU4-48P-201ENST00000365559 TMEM18Q96B42 140 aa3.4□□□□□ -1.87
RNU4-48P-201ENST00000365559 UBXN10Q96LJ8 280 aa3.4□□□□□ -1.87
RNU4-48P-201ENST00000365559 KRTAP9-8Q9BYQ0 159 aa3.4□□□□□ -1.87
RNU4-48P-201ENST00000365559 DCLK3Q9C098 648 aa3.4□□□□□ -1.87
RNU4-48P-201ENST00000365559 NPFFR1Q9GZQ6 430 aa3.4□□□□□ -1.87
RNU4-48P-201ENST00000365559 TAOK3Q9H2K8 898 aa3.4□□□□□ -1.87
RNU4-48P-201ENST00000365559 HIPK2Q9H2X6 1198 aa3.4□□□□□ -1.87
RNU4-48P-201ENST00000365559 SLC32A1Q9H598 525 aa3.4□□□□□ -1.87
RNU4-48P-201ENST00000365559 EPHX3Q9H6B9 360 aa3.4□□□□□ -1.87
RNU4-48P-201ENST00000365559 MVB12BQ9H7P6 319 aa3.4□□□□□ -1.87
RNU4-48P-201ENST00000365559 HIF1ANQ9NWT6 349 aa3.4□□□□□ -1.87
RNU4-48P-201ENST00000365559 SAGE1Q9NXZ1 904 aa3.4□□□□□ -1.87
RNU4-48P-201ENST00000365559 PLK2Q9NYY3 685 aa3.4□□□□□ -1.87
RNU4-48P-201ENST00000365559 FZD10Q9ULW2 581 aa3.4□□□□□ -1.87
RNU4-48P-201ENST00000365559 MYO6Q9UM54 1294 aa3.4□□□□□ -1.87
RNU4-48P-201ENST00000365559 SUFUQ9UMX1 484 aa3.4□□□□□ -1.87
RNU4-48P-201ENST00000365559 CNPY2Q9Y2B0 182 aa3.4□□□□□ -1.87
RNU4-48P-201ENST00000365559 A0A096LPK6 155 aa3.39□□□□□ -1.87
RNU4-48P-201ENST00000365559 PROB1E7EW31 1015 aa3.39□□□□□ -1.87
RNU4-48P-201ENST00000365559 PER2O15055 1255 aa3.39□□□□□ -1.87
RNU4-48P-201ENST00000365559 POLBP06746 335 aa3.39□□□□□ -1.87
RNU4-48P-201ENST00000365559 NGFRP08138 427 aa3.39□□□□□ -1.87
RNU4-48P-201ENST00000365559 MMP3P08254 477 aa3.39□□□□□ -1.87
RNU4-48P-201ENST00000365559 PLA2G2AP14555 144 aa3.39□□□□□ -1.87
RNU4-48P-201ENST00000365559 DCTDP32321 178 aa3.39□□□□□ -1.87
RNU4-48P-201ENST00000365559 MLH1P40692 756 aa3.39□□□□□ -1.87
RNU4-48P-201ENST00000365559 GPR12P47775 334 aa3.39□□□□□ -1.87
RNU4-48P-201ENST00000365559 PCYT1AP49585 367 aa3.39□□□□□ -1.87
RNU4-48P-201ENST00000365559 PPM1FP49593 454 aaPredicted RBP3.39□□□□□ -1.87
RNU4-48P-201ENST00000365559 TBL3Q12788 808 aaKnown RBP3.39□□□□□ -1.87
RNU4-48P-201ENST00000365559 BIRC3Q13489 604 aa3.39□□□□□ -1.87
RNU4-48P-201ENST00000365559 TDGQ13569 410 aa3.39□□□□□ -1.87
RNU4-48P-201ENST00000365559 ERV3-1Q14264 604 aa3.39□□□□□ -1.87
RNU4-48P-201ENST00000365559 NAA25Q14CX7 972 aa3.39□□□□□ -1.87
RNU4-48P-201ENST00000365559 TAF12Q16514 161 aa3.39□□□□□ -1.87
RNU4-48P-201ENST00000365559 SLC4A8Q2Y0W8 1093 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms