RNA–Protein interactions for RNA: ENST00000361866.7

COL6A1-201, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL6A1, Length 4,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-201ENST00000361866 DMTF1Q9Y222 760 aa14.07□□□□□ -0.16
COL6A1-201ENST00000361866 PSAT1Q9Y617 370 aa14.07□□□□□ -0.16
COL6A1-201ENST00000361866 MYH1P12882 1939 aa14.07□□□□□ -0.16
COL6A1-201ENST00000361866 MYH4Q9Y623 1939 aa14.07□□□□□ -0.16
COL6A1-201ENST00000361866 APOA1P02647 267 aa14.07□□□□□ -0.16
COL6A1-201ENST00000361866 ITGB6P18564 788 aa14.07□□□□□ -0.16
COL6A1-201ENST00000361866 ADCYAP1R1P41586 468 aa14.07□□□□□ -0.16
COL6A1-201ENST00000361866 CDH15P55291 814 aa14.07□□□□□ -0.16
COL6A1-201ENST00000361866 RAB10P61026 200 aa14.07□□□□□ -0.16
COL6A1-201ENST00000361866 MARC1Q5VT66 337 aa14.07□□□□□ -0.16
COL6A1-201ENST00000361866 SLC27A1Q6PCB7 646 aa14.07□□□□□ -0.16
COL6A1-201ENST00000361866 FAM126BQ8IXS8 530 aa14.07□□□□□ -0.16
COL6A1-201ENST00000361866 OFCC1Q8IZS5 231 aa14.07□□□□□ -0.16
COL6A1-201ENST00000361866 ZNF567Q8N184 647 aa14.07□□□□□ -0.16
COL6A1-201ENST00000361866 DCBLD1Q8N8Z6 715 aa14.07□□□□□ -0.16
COL6A1-201ENST00000361866 ADCY4Q8NFM4 1077 aa14.07□□□□□ -0.16
COL6A1-201ENST00000361866 SPATA22Q8NHS9 363 aa14.07□□□□□ -0.16
COL6A1-201ENST00000361866 ASIC4Q96FT7 647 aa14.07□□□□□ -0.16
COL6A1-201ENST00000361866 LIMD1Q9UGP4 676 aa14.07□□□□□ -0.16
COL6A1-201ENST00000361866 CCDC189A1A4V9 331 aa14.07□□□□□ -0.16
COL6A1-201ENST00000361866 SYNCRIPO60506 623 aaKnown RBP14.07□□□□□ -0.16
COL6A1-201ENST00000361866 CRTAMO95727 393 aa14.07□□□□□ -0.16
COL6A1-201ENST00000361866 GLP2RO95838 553 aa14.07□□□□□ -0.16
COL6A1-201ENST00000361866 BDNFP23560 247 aa14.07□□□□□ -0.16
COL6A1-201ENST00000361866 ASPAP45381 313 aa14.07□□□□□ -0.16
COL6A1-201ENST00000361866 SLC18A2Q05940 514 aa14.07□□□□□ -0.16
COL6A1-201ENST00000361866 DDX39BQ13838 428 aaKnown RBP14.07□□□□□ -0.16
COL6A1-201ENST00000361866 C10orf120Q5SQS8 335 aa14.07□□□□□ -0.16
COL6A1-201ENST00000361866 LDLRAP1Q5SW96 308 aa14.07□□□□□ -0.16
COL6A1-201ENST00000361866 FKBP1CQ5VVH2 108 aa14.07□□□□□ -0.16
COL6A1-201ENST00000361866 CLEC6AQ6EIG7 209 aa14.07□□□□□ -0.16
COL6A1-201ENST00000361866 CATSPERGQ6ZRH7 1159 aa14.07□□□□□ -0.16
COL6A1-201ENST00000361866 ZCCHC7Q8N3Z6 543 aaKnown RBP14.07□□□□□ -0.16
COL6A1-201ENST00000361866 FBXO30Q8TB52 745 aa14.07□□□□□ -0.16
COL6A1-201ENST00000361866 CRYGNQ8WXF5 182 aa14.07□□□□□ -0.16
COL6A1-201ENST00000361866 PIWIL1Q96J94 861 aaKnown RBP14.07□□□□□ -0.16
COL6A1-201ENST00000361866 PGLYRP2Q96PD5 576 aa14.07□□□□□ -0.16
COL6A1-201ENST00000361866 C9orf16Q9BUW7 83 aa14.07□□□□□ -0.16
COL6A1-201ENST00000361866 TUBGCP4Q9UGJ1 667 aa14.07□□□□□ -0.16
COL6A1-201ENST00000361866 FETUBQ9UGM5 382 aa14.07□□□□□ -0.16
COL6A1-201ENST00000361866 SEPT3Q9UH03 358 aa14.07□□□□□ -0.16
COL6A1-201ENST00000361866 AGRPO00253 132 aa14.06□□□□□ -0.16
COL6A1-201ENST00000361866 ZNF682O95780 498 aa14.06□□□□□ -0.16
COL6A1-201ENST00000361866 HGFP14210 728 aa14.06□□□□□ -0.16
COL6A1-201ENST00000361866 ITGAXP20702 1163 aa14.06□□□□□ -0.16
COL6A1-201ENST00000361866 CYP2B6P20813 491 aa14.06□□□□□ -0.16
COL6A1-201ENST00000361866 MATKP42679 507 aa14.06□□□□□ -0.16
COL6A1-201ENST00000361866 NEK2P51955 445 aa14.06□□□□□ -0.16
COL6A1-201ENST00000361866 NAA20P61599 178 aa14.06□□□□□ -0.16
COL6A1-201ENST00000361866 MPP1Q00013 466 aa14.06□□□□□ -0.16
COL6A1-201ENST00000361866 EFEMP1Q12805 493 aa14.06□□□□□ -0.16
COL6A1-201ENST00000361866 NAB1Q13506 487 aa14.06□□□□□ -0.16
COL6A1-201ENST00000361866 RAB6CQ53S08 254 aa14.06□□□□□ -0.16
COL6A1-201ENST00000361866 FASTKD5Q7L8L6 764 aaKnown RBP14.06□□□□□ -0.16
COL6A1-201ENST00000361866 UBR7Q8N806 425 aa14.06□□□□□ -0.16
COL6A1-201ENST00000361866 ARL10Q8N8L6 244 aa14.06□□□□□ -0.16
COL6A1-201ENST00000361866 PTGR2Q8N8N7 351 aaPredicted RBP14.06□□□□□ -0.16
COL6A1-201ENST00000361866 BDH2Q9BUT1 245 aa14.06□□□□□ -0.16
COL6A1-201ENST00000361866 RAB6CQ9H0N0 254 aa14.06□□□□□ -0.16
COL6A1-201ENST00000361866 RMI1Q9H9A7 625 aa14.06□□□□□ -0.16
COL6A1-201ENST00000361866 ARHGEF4Q9NR80 690 aa14.06□□□□□ -0.16
COL6A1-201ENST00000361866 TRMT6Q9UJA5 497 aaKnown RBP14.06□□□□□ -0.16
COL6A1-201ENST00000361866 A0A1B0GVG6 124 aa14.06□□□□□ -0.16
COL6A1-201ENST00000361866 DHRS12A0PJE2 317 aa14.06□□□□□ -0.16
COL6A1-201ENST00000361866 GUCA1CO95843 209 aa14.06□□□□□ -0.16
COL6A1-201ENST00000361866 LGALS2P05162 132 aa14.06□□□□□ -0.16
COL6A1-201ENST00000361866 TPSB2P20231 275 aa14.06□□□□□ -0.16
COL6A1-201ENST00000361866 OAZ1P54368 228 aa14.06□□□□□ -0.16
COL6A1-201ENST00000361866 SP2Q02086 613 aa14.06□□□□□ -0.16
COL6A1-201ENST00000361866 VAC14Q08AM6 782 aa14.06□□□□□ -0.16
COL6A1-201ENST00000361866 LPIN1Q14693 890 aa14.06□□□□□ -0.16
COL6A1-201ENST00000361866 TPSAB1Q15661 275 aa14.06□□□□□ -0.16
COL6A1-201ENST00000361866 TRIM60Q495X7 471 aa14.06□□□□□ -0.16
COL6A1-201ENST00000361866 MFSD4BQ5TF39 518 aa14.06□□□□□ -0.16
COL6A1-201ENST00000361866 SPPL2CQ8IUH8 684 aa14.06□□□□□ -0.16
COL6A1-201ENST00000361866 TMEM130Q8N3G9 435 aa14.06□□□□□ -0.16
COL6A1-201ENST00000361866 DPEP3Q9H4B8 488 aa14.06□□□□□ -0.16
COL6A1-201ENST00000361866 COQ10BQ9H8M1 238 aa14.06□□□□□ -0.16
COL6A1-201ENST00000361866 CLK4Q9HAZ1 481 aaKnown RBP14.06□□□□□ -0.16
COL6A1-201ENST00000361866 PNPLA3Q9NST1 481 aa14.06□□□□□ -0.16
COL6A1-201ENST00000361866 SCN3BQ9NY72 215 aa14.06□□□□□ -0.16
COL6A1-201ENST00000361866 STX7O15400 261 aaKnown RBP14.06□□□□□ -0.16
COL6A1-201ENST00000361866 PLA2G6O60733 806 aa14.06□□□□□ -0.16
COL6A1-201ENST00000361866 CLASP2O75122 1294 aaKnown RBP14.06□□□□□ -0.16
COL6A1-201ENST00000361866 ZBTB11O95625 1053 aaPredicted RBP14.06□□□□□ -0.16
COL6A1-201ENST00000361866 POMCP01189 267 aa14.06□□□□□ -0.16
COL6A1-201ENST00000361866 XPAP23025 273 aaPredicted RBP14.06□□□□□ -0.16
COL6A1-201ENST00000361866 RAP1GDS1P52306 607 aa14.06□□□□□ -0.16
COL6A1-201ENST00000361866 XIAPP98170 497 aa14.06□□□□□ -0.16
COL6A1-201ENST00000361866 UBE3AQ05086 875 aa14.06□□□□□ -0.16
COL6A1-201ENST00000361866 SLC22A9Q8IVM8 553 aa14.06□□□□□ -0.16
COL6A1-201ENST00000361866 DENND6AQ8IWF6 608 aa14.06□□□□□ -0.16
COL6A1-201ENST00000361866 FBXO39Q8N4B4 442 aa14.06□□□□□ -0.16
COL6A1-201ENST00000361866 ACOX2Q99424 681 aa14.06□□□□□ -0.16
COL6A1-201ENST00000361866 SEPT5Q99719 369 aaPredicted RBP14.06□□□□□ -0.16
COL6A1-201ENST00000361866 C1orf50Q9BV19 199 aa14.06□□□□□ -0.16
COL6A1-201ENST00000361866 OSBPL11Q9BXB4 747 aa14.06□□□□□ -0.16
COL6A1-201ENST00000361866 PCDHB12Q9Y5F1 795 aa14.06□□□□□ -0.16
COL6A1-201ENST00000361866 SNX10Q9Y5X0 201 aa14.06□□□□□ -0.16
COL6A1-201ENST00000361866 H3BSA7 217 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms