RNA–Protein interactions for RNA: ENST00000361543.3

SGMS1-201, Transcript of sphingomyelin synthase 1, humanhuman

TSL 1 (best) BASIC

Gene SGMS1, Length 1,096 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-201ENST00000361543 PCDH20Q8N6Y1 951 aaKnown RBP7.82□□□□□ -1.16
SGMS1-201ENST00000361543 CHST14Q8NCH0 376 aa7.82□□□□□ -1.16
SGMS1-201ENST00000361543 TMIEQ8NEW7 156 aa7.82□□□□□ -1.16
SGMS1-201ENST00000361543 MRFAP1L1Q96HT8 127 aa7.82□□□□□ -1.16
SGMS1-201ENST00000361543 VCPIP1Q96JH7 1222 aa7.82□□□□□ -1.16
SGMS1-201ENST00000361543 CAMK1GQ96NX5 476 aa7.82□□□□□ -1.16
SGMS1-201ENST00000361543 EPAS1Q99814 870 aa7.82□□□□□ -1.16
SGMS1-201ENST00000361543 TRPM6Q9BX84 2022 aa7.82□□□□□ -1.16
SGMS1-201ENST00000361543 MAGEB5Q9BZ81 275 aa7.82□□□□□ -1.16
SGMS1-201ENST00000361543 CEP44Q9C0F1 390 aa7.82□□□□□ -1.16
SGMS1-201ENST00000361543 RBSNQ9H1K0 784 aa7.82□□□□□ -1.16
SGMS1-201ENST00000361543 HAUS4Q9H6D7 363 aa7.82□□□□□ -1.16
SGMS1-201ENST00000361543 RETREG1Q9H6L5 497 aa7.82□□□□□ -1.16
SGMS1-201ENST00000361543 EBF2Q9HAK2 575 aa7.82□□□□□ -1.16
SGMS1-201ENST00000361543 DYRK4Q9NR20 520 aa7.82□□□□□ -1.16
SGMS1-201ENST00000361543 AASDHPPTQ9NRN7 309 aa7.82□□□□□ -1.16
SGMS1-201ENST00000361543 TM7SF3Q9NS93 570 aa7.82□□□□□ -1.16
SGMS1-201ENST00000361543 NDFIP2Q9NV92 336 aa7.82□□□□□ -1.16
SGMS1-201ENST00000361543 PARVAQ9NVD7 372 aa7.82□□□□□ -1.16
SGMS1-201ENST00000361543 TMEM248Q9NWD8 314 aa7.82□□□□□ -1.16
SGMS1-201ENST00000361543 IL36AQ9UHA7 158 aa7.82□□□□□ -1.16
SGMS1-201ENST00000361543 DNAI1Q9UI46 699 aa7.82□□□□□ -1.16
SGMS1-201ENST00000361543 TPX2Q9ULW0 747 aaKnown RBP7.82□□□□□ -1.16
SGMS1-201ENST00000361543 SNX11Q9Y5W9 270 aa7.82□□□□□ -1.16
SGMS1-201ENST00000361543 LRRK1Q38SD2 2015 aa7.81□□□□□ -1.16
SGMS1-201ENST00000361543 SHROOM3Q8TF72 1996 aa7.81□□□□□ -1.16
SGMS1-201ENST00000361543 CXorf51AA0A1B0GTR3 108 aa7.81□□□□□ -1.16
SGMS1-201ENST00000361543 VILLO15195 856 aa7.81□□□□□ -1.16
SGMS1-201ENST00000361543 MAP3K7O43318 606 aa7.81□□□□□ -1.16
SGMS1-201ENST00000361543 CREB3O43889 395 aa7.81□□□□□ -1.16
SGMS1-201ENST00000361543 RAMP2O60895 175 aa7.81□□□□□ -1.16
SGMS1-201ENST00000361543 ZNF821O75541 412 aaPredicted RBP7.81□□□□□ -1.16
SGMS1-201ENST00000361543 LEFTY1O75610 366 aa7.81□□□□□ -1.16
SGMS1-201ENST00000361543 SERPING1P05155 500 aa7.81□□□□□ -1.16
SGMS1-201ENST00000361543 MYBL1P10243 752 aa7.81□□□□□ -1.16
SGMS1-201ENST00000361543 GZMAP12544 262 aa7.81□□□□□ -1.16
SGMS1-201ENST00000361543 PSMA2P25787 234 aa7.81□□□□□ -1.16
SGMS1-201ENST00000361543 CD38P28907 300 aa7.81□□□□□ -1.16
SGMS1-201ENST00000361543 EPHB2P29323 1055 aa7.81□□□□□ -1.16
SGMS1-201ENST00000361543 MAT2AP31153 395 aaKnown RBP7.81□□□□□ -1.16
SGMS1-201ENST00000361543 L1CAMP32004 1257 aa7.81□□□□□ -1.16
SGMS1-201ENST00000361543 NUDT1P36639 197 aa7.81□□□□□ -1.16
SGMS1-201ENST00000361543 CCT8P50990 548 aa7.81□□□□□ -1.16
SGMS1-201ENST00000361543 DNA2P51530 1060 aa7.81□□□□□ -1.16
SGMS1-201ENST00000361543 CCNHP51946 323 aaPredicted RBP7.81□□□□□ -1.16
SGMS1-201ENST00000361543 GEMIN4P57678 1058 aaKnown RBP7.81□□□□□ -1.16
SGMS1-201ENST00000361543 TAS2R38P59533 333 aa7.81□□□□□ -1.16
SGMS1-201ENST00000361543 FAM193AP78312 1265 aa7.81□□□□□ -1.16
SGMS1-201ENST00000361543 OGDHQ02218 1023 aa7.81□□□□□ -1.16
SGMS1-201ENST00000361543 SLC20A2Q08357 652 aa7.81□□□□□ -1.16
SGMS1-201ENST00000361543 MAMLD1Q13495 774 aa7.81□□□□□ -1.16
SGMS1-201ENST00000361543 POLD3Q15054 466 aaPredicted RBP7.81□□□□□ -1.16
SGMS1-201ENST00000361543 ZNF423Q2M1K9 1284 aa7.81□□□□□ -1.16
SGMS1-201ENST00000361543 SETMARQ53H47 684 aaPredicted RBP7.81□□□□□ -1.16
SGMS1-201ENST00000361543 TDRD12Q587J7 1177 aaKnown RBP7.81□□□□□ -1.16
SGMS1-201ENST00000361543 KCNT1Q5JUK3 1230 aa7.81□□□□□ -1.16
SGMS1-201ENST00000361543 NAPEPLDQ6IQ20 393 aa7.81□□□□□ -1.16
SGMS1-201ENST00000361543 PLEKHA7Q6IQ23 1121 aa7.81□□□□□ -1.16
SGMS1-201ENST00000361543 DPY19L3Q6ZPD9 716 aa7.81□□□□□ -1.16
SGMS1-201ENST00000361543 TRIM69Q86WT6 500 aa7.81□□□□□ -1.16
SGMS1-201ENST00000361543 RTL3Q8N8U3 475 aaKnown RBP7.81□□□□□ -1.16
SGMS1-201ENST00000361543 OR8K1Q8NGG5 319 aa7.81□□□□□ -1.16
SGMS1-201ENST00000361543 SETD7Q8WTS6 366 aaKnown RBP7.81□□□□□ -1.16
SGMS1-201ENST00000361543 ARHGEF2Q92974 986 aaKnown RBP7.81□□□□□ -1.16
SGMS1-201ENST00000361543 ARRDC3Q96B67 414 aa7.81□□□□□ -1.16
SGMS1-201ENST00000361543 SKA1Q96BD8 255 aa7.81□□□□□ -1.16
SGMS1-201ENST00000361543 ZNF653Q96CK0 615 aa7.81□□□□□ -1.16
SGMS1-201ENST00000361543 PPP1R16AQ96I34 528 aa7.81□□□□□ -1.16
SGMS1-201ENST00000361543 SERAC1Q96JX3 654 aa7.81□□□□□ -1.16
SGMS1-201ENST00000361543 MAGEH1Q9H213 219 aa7.81□□□□□ -1.16
SGMS1-201ENST00000361543 PREBQ9HCU5 417 aa7.81□□□□□ -1.16
SGMS1-201ENST00000361543 RALYQ9UKM9 306 aaKnown RBP7.81□□□□□ -1.16
SGMS1-201ENST00000361543 PCOLCE2Q9UKZ9 415 aa7.81□□□□□ -1.16
SGMS1-201ENST00000361543 FZD10Q9ULW2 581 aa7.81□□□□□ -1.16
SGMS1-201ENST00000361543 HPCAL4Q9UM19 191 aa7.81□□□□□ -1.16
SGMS1-201ENST00000361543 WASF3Q9UPY6 502 aa7.81□□□□□ -1.16
SGMS1-201ENST00000361543 FCF1Q9Y324 198 aaKnown RBP7.81□□□□□ -1.16
SGMS1-201ENST00000361543 PCDHB9Q9Y5E1 797 aa7.81□□□□□ -1.16
SGMS1-201ENST00000361543 PCDHGB2Q9Y5G2 931 aa7.81□□□□□ -1.16
SGMS1-201ENST00000361543 ACTL7AQ9Y615 435 aa7.81□□□□□ -1.16
SGMS1-201ENST00000361543 WASF2Q9Y6W5 498 aa7.81□□□□□ -1.16
SGMS1-201ENST00000361543 PKD1L2Q7Z442 2459 aa7.81□□□□□ -1.16
SGMS1-201ENST00000361543 TMEM191CA6NGB0 347 aa7.8□□□□□ -1.16
SGMS1-201ENST00000361543 ZSCAN5CA6NGD5 496 aaPredicted RBP7.8□□□□□ -1.16
SGMS1-201ENST00000361543 H0Y8X5 98 aa7.8□□□□□ -1.16
SGMS1-201ENST00000361543 RNF103O00237 685 aa7.8□□□□□ -1.16
SGMS1-201ENST00000361543 DDX3XO00571 662 aaKnown RBP eCLIP7.8□□□□□ -1.16
SGMS1-201ENST00000361543 WNT9AO14904 365 aa7.8□□□□□ -1.16
SGMS1-201ENST00000361543 FGF10O15520 208 aaPredicted RBP7.8□□□□□ -1.16
SGMS1-201ENST00000361543 FLRT2O43155 660 aa7.8□□□□□ -1.16
SGMS1-201ENST00000361543 RNGTTO60942 597 aaKnown RBP7.8□□□□□ -1.16
SGMS1-201ENST00000361543 CD160O95971 181 aa7.8□□□□□ -1.16
SGMS1-201ENST00000361543 FTLP02792 175 aaPredicted RBP7.8□□□□□ -1.16
SGMS1-201ENST00000361543 WNT1P04628 370 aa7.8□□□□□ -1.16
SGMS1-201ENST00000361543 GYPCP04921 128 aa7.8□□□□□ -1.16
SGMS1-201ENST00000361543 SKILP12757 684 aa7.8□□□□□ -1.16
SGMS1-201ENST00000361543 SPINK2P20155 84 aa7.8□□□□□ -1.16
SGMS1-201ENST00000361543 ITGB7P26010 798 aa7.8□□□□□ -1.16
SGMS1-201ENST00000361543 HNRNPH3P31942 346 aaKnown RBP7.8□□□□□ -1.16
SGMS1-201ENST00000361543 HTR7P34969 479 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms