RNA–Protein interactions for RNA: ENST00000361439.8

NSMCE1-201, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NSMCE1, Length 1,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-201ENST00000361439 CEP104O60308 925 aa14.05□□□□□ -0.16
NSMCE1-201ENST00000361439 SIN3BO75182 1162 aa14.05□□□□□ -0.16
NSMCE1-201ENST00000361439 POP4O95707 220 aaKnown RBP14.05□□□□□ -0.16
NSMCE1-201ENST00000361439 IGSF6O95976 241 aa14.05□□□□□ -0.16
NSMCE1-201ENST00000361439 FGGP02679 453 aa14.05□□□□□ -0.16
NSMCE1-201ENST00000361439 PRNPP04156 253 aa14.05□□□□□ -0.16
NSMCE1-201ENST00000361439 PECAM1P16284 738 aaPredicted RBP14.05□□□□□ -0.16
NSMCE1-201ENST00000361439 WASP42768 502 aa14.05□□□□□ -0.16
NSMCE1-201ENST00000361439 MMP13P45452 471 aa14.05□□□□□ -0.16
NSMCE1-201ENST00000361439 COPAP53621 1224 aa14.05□□□□□ -0.16
NSMCE1-201ENST00000361439 RHOAP61586 193 aa14.05□□□□□ -0.16
NSMCE1-201ENST00000361439 AP1B1Q10567 949 aa14.05□□□□□ -0.16
NSMCE1-201ENST00000361439 ZNF235Q14590 738 aa14.05□□□□□ -0.16
NSMCE1-201ENST00000361439 LLGL1Q15334 1064 aa14.05□□□□□ -0.16
NSMCE1-201ENST00000361439 SLC45A4Q5BKX6 768 aa14.05□□□□□ -0.16
NSMCE1-201ENST00000361439 FAM46CQ5VWP2 391 aa14.05□□□□□ -0.16
NSMCE1-201ENST00000361439 ALG1LQ6GMV1 187 aa14.05□□□□□ -0.16
NSMCE1-201ENST00000361439 NPNTQ6UXI9 565 aa14.05□□□□□ -0.16
NSMCE1-201ENST00000361439 Q6ZVU0 165 aa14.05□□□□□ -0.16
NSMCE1-201ENST00000361439 ACTRT1Q8TDG2 376 aa14.05□□□□□ -0.16
NSMCE1-201ENST00000361439 QKIQ96PU8 341 aaKnown RBP eCLIP14.05□□□□□ -0.16
NSMCE1-201ENST00000361439 HERPUD2Q9BSE4 406 aa14.05□□□□□ -0.16
NSMCE1-201ENST00000361439 CPEB1Q9BZB8 566 aaKnown RBP14.05□□□□□ -0.16
NSMCE1-201ENST00000361439 ZDHHC4Q9NPG8 344 aa14.05□□□□□ -0.16
NSMCE1-201ENST00000361439 SAE1Q9UBE0 346 aaPredicted RBP14.05□□□□□ -0.16
NSMCE1-201ENST00000361439 RNF14Q9UBS8 474 aa14.05□□□□□ -0.16
NSMCE1-201ENST00000361439 FCF1Q9Y324 198 aaKnown RBP14.05□□□□□ -0.16
NSMCE1-201ENST00000361439 SAR1BQ9Y6B6 198 aa14.05□□□□□ -0.16
NSMCE1-201ENST00000361439 CKAP5Q14008 2032 aa14.04□□□□□ -0.16
NSMCE1-201ENST00000361439 TCRBV21S2A2A0A5A6 115 aa14.04□□□□□ -0.16
NSMCE1-201ENST00000361439 CFAP69A5D8W1 941 aa14.04□□□□□ -0.16
NSMCE1-201ENST00000361439 ZNF217O75362 1048 aa14.04□□□□□ -0.16
NSMCE1-201ENST00000361439 NEBLO76041 1014 aa14.04□□□□□ -0.16
NSMCE1-201ENST00000361439 ADH1BP00325 375 aa14.04□□□□□ -0.16
NSMCE1-201ENST00000361439 TDGF1P13385 188 aa14.04□□□□□ -0.16
NSMCE1-201ENST00000361439 CXCR5P32302 372 aa14.04□□□□□ -0.16
NSMCE1-201ENST00000361439 NUMBP49757 651 aa14.04□□□□□ -0.16
NSMCE1-201ENST00000361439 EIF3EP60228 445 aaKnown RBP14.04□□□□□ -0.16
NSMCE1-201ENST00000361439 SLC10A7Q0GE19 358 aa14.04□□□□□ -0.16
NSMCE1-201ENST00000361439 CCDC15Q0P6D6 951 aa14.04□□□□□ -0.16
NSMCE1-201ENST00000361439 BYSLQ13895 437 aaKnown RBP14.04□□□□□ -0.16
NSMCE1-201ENST00000361439 CCNG2Q16589 344 aa14.04□□□□□ -0.16
NSMCE1-201ENST00000361439 ZNF776Q68DI1 518 aaPredicted RBP14.04□□□□□ -0.16
NSMCE1-201ENST00000361439 HEATR6Q6AI08 1181 aaKnown RBP14.04□□□□□ -0.16
NSMCE1-201ENST00000361439 KIAA1211LQ6NV74 962 aa14.04□□□□□ -0.16
NSMCE1-201ENST00000361439 DRICH1Q6PGQ1 229 aaPredicted RBP14.04□□□□□ -0.16
NSMCE1-201ENST00000361439 DPY19L3Q6ZPD9 716 aa14.04□□□□□ -0.16
NSMCE1-201ENST00000361439 ZSCAN30Q86W11 494 aa14.04□□□□□ -0.16
NSMCE1-201ENST00000361439 TMPRSS6Q8IU80 811 aa14.04□□□□□ -0.16
NSMCE1-201ENST00000361439 CDKL3Q8IVW4 592 aaPredicted RBP14.04□□□□□ -0.16
NSMCE1-201ENST00000361439 C17orf53Q8N3J3 647 aaPredicted RBP14.04□□□□□ -0.16
NSMCE1-201ENST00000361439 NETO2Q8NC67 525 aa14.04□□□□□ -0.16
NSMCE1-201ENST00000361439 HCAR2Q8TDS4 363 aa14.04□□□□□ -0.16
NSMCE1-201ENST00000361439 NELL1Q92832 810 aa14.04□□□□□ -0.16
NSMCE1-201ENST00000361439 MRGPRX1Q96LB2 322 aa14.04□□□□□ -0.16
NSMCE1-201ENST00000361439 TUBGCP5Q96RT8 1024 aa14.04□□□□□ -0.16
NSMCE1-201ENST00000361439 FAM129BQ96TA1 746 aa14.04□□□□□ -0.16
NSMCE1-201ENST00000361439 IL12RB2Q99665 862 aa14.04□□□□□ -0.16
NSMCE1-201ENST00000361439 MGME1Q9BQP7 344 aa14.04□□□□□ -0.16
NSMCE1-201ENST00000361439 HEPHQ9BQS7 1158 aa14.04□□□□□ -0.16
NSMCE1-201ENST00000361439 OSBPL1AQ9BXW6 950 aa14.04□□□□□ -0.16
NSMCE1-201ENST00000361439 C2orf42Q9NWW7 574 aa14.04□□□□□ -0.16
NSMCE1-201ENST00000361439 TRHDEQ9UKU6 1024 aa14.04□□□□□ -0.16
NSMCE1-201ENST00000361439 PPM1HQ9ULR3 514 aa14.04□□□□□ -0.16
NSMCE1-201ENST00000361439 C1QTNF3-AMACRE9PGA6 284 aa14.03□□□□□ -0.16
NSMCE1-201ENST00000361439 H7C0C1 242 aa14.03□□□□□ -0.16
NSMCE1-201ENST00000361439 PGRMC1O00264 195 aaKnown RBP14.03□□□□□ -0.16
NSMCE1-201ENST00000361439 MAP3K6O95382 1288 aa14.03□□□□□ -0.16
NSMCE1-201ENST00000361439 RBP3P10745 1247 aa14.03□□□□□ -0.16
NSMCE1-201ENST00000361439 GABRG2P18507 467 aa14.03□□□□□ -0.16
NSMCE1-201ENST00000361439 COL9A1P20849 921 aa14.03□□□□□ -0.16
NSMCE1-201ENST00000361439 C5AR1P21730 350 aa14.03□□□□□ -0.16
NSMCE1-201ENST00000361439 CASQ1P31415 396 aa14.03□□□□□ -0.16
NSMCE1-201ENST00000361439 STIP1P31948 543 aaKnown RBP14.03□□□□□ -0.16
NSMCE1-201ENST00000361439 CHRNA3P32297 505 aa14.03□□□□□ -0.16
NSMCE1-201ENST00000361439 ATP5OP48047 213 aa14.03□□□□□ -0.16
NSMCE1-201ENST00000361439 CCNHP51946 323 aaPredicted RBP14.03□□□□□ -0.16
NSMCE1-201ENST00000361439 AP1S1P61966 158 aa14.03□□□□□ -0.16
NSMCE1-201ENST00000361439 LONRF2Q1L5Z9 754 aa14.03□□□□□ -0.16
NSMCE1-201ENST00000361439 MYLK3Q32MK0 819 aa14.03□□□□□ -0.16
NSMCE1-201ENST00000361439 TEX44Q53QW1 395 aa14.03□□□□□ -0.16
NSMCE1-201ENST00000361439 ZC3H18Q86VM9 953 aaKnown RBP14.03□□□□□ -0.16
NSMCE1-201ENST00000361439 MAML2Q8IZL2 1156 aaPredicted RBP14.03□□□□□ -0.16
NSMCE1-201ENST00000361439 STK40Q8N2I9 435 aa14.03□□□□□ -0.16
NSMCE1-201ENST00000361439 ZNF366Q8N895 744 aa14.03□□□□□ -0.16
NSMCE1-201ENST00000361439 SLC35B2Q8TB61 432 aa14.03□□□□□ -0.16
NSMCE1-201ENST00000361439 HTR3CQ8WXA8 447 aa14.03□□□□□ -0.16
NSMCE1-201ENST00000361439 PRCCQ92733 491 aaPredicted RBP14.03□□□□□ -0.16
NSMCE1-201ENST00000361439 NKD2Q969F2 451 aaPredicted RBP14.03□□□□□ -0.16
NSMCE1-201ENST00000361439 SIPA1Q96FS4 1042 aa14.03□□□□□ -0.16
NSMCE1-201ENST00000361439 PPP1R16AQ96I34 528 aa14.03□□□□□ -0.16
NSMCE1-201ENST00000361439 NUDCD1Q96RS6 583 aa14.03□□□□□ -0.16
NSMCE1-201ENST00000361439 POLR1EQ9GZS1 481 aaKnown RBP14.03□□□□□ -0.16
NSMCE1-201ENST00000361439 MKRN2Q9H000 416 aaKnown RBP14.03□□□□□ -0.16
NSMCE1-201ENST00000361439 IRF2BPLQ9H1B7 796 aa14.03□□□□□ -0.16
NSMCE1-201ENST00000361439 RBM22Q9NW64 420 aaKnown RBP eCLIP14.03□□□□□ -0.16
NSMCE1-201ENST00000361439 LHX3Q9UBR4 397 aa14.03□□□□□ -0.16
NSMCE1-201ENST00000361439 IL36AQ9UHA7 158 aa14.03□□□□□ -0.16
NSMCE1-201ENST00000361439 ATP8A1Q9Y2Q0 1164 aa14.03□□□□□ -0.16
NSMCE1-201ENST00000361439 ACTL7AQ9Y615 435 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms