RNA–Protein interactions for RNA: ENST00000360413.7

SRGAP3-201, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 1 (best) BASIC

Gene SRGAP3, Length 8,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-201ENST00000360413 COPS4Q9BT78 406 aa13.36□□□□□ -0.27
SRGAP3-201ENST00000360413 MED28Q9H204 178 aa13.36□□□□□ -0.27
SRGAP3-201ENST00000360413 WDR37Q9Y2I8 494 aa13.36□□□□□ -0.27
SRGAP3-201ENST00000360413 IL18Q14116 193 aa13.36□□□□□ -0.27
SRGAP3-201ENST00000360413 LYPLAL1Q5VWZ2 237 aa13.36□□□□□ -0.27
SRGAP3-201ENST00000360413 CIDEBQ9UHD4 219 aa13.36□□□□□ -0.27
SRGAP3-201ENST00000360413 FAM240BA0A1B0GVZ2 78 aa13.36□□□□□ -0.27
SRGAP3-201ENST00000360413 ALADP13716 330 aa13.36□□□□□ -0.27
SRGAP3-201ENST00000360413 OLR1P78380 273 aa13.36□□□□□ -0.27
SRGAP3-201ENST00000360413 SLC25A3Q00325 362 aa13.36□□□□□ -0.27
SRGAP3-201ENST00000360413 MTMR2Q13614 643 aa13.36□□□□□ -0.27
SRGAP3-201ENST00000360413 ZNF280DQ6N043 979 aa13.36□□□□□ -0.27
SRGAP3-201ENST00000360413 CRTC3Q6UUV7 619 aa13.36□□□□□ -0.27
SRGAP3-201ENST00000360413 PRR23CQ6ZRP0 262 aa13.36□□□□□ -0.27
SRGAP3-201ENST00000360413 POLNQ7Z5Q5 900 aa13.36□□□□□ -0.27
SRGAP3-201ENST00000360413 TTC29Q8NA56 475 aaPredicted RBP13.36□□□□□ -0.27
SRGAP3-201ENST00000360413 TBC1D30Q9Y2I9 924 aa13.36□□□□□ -0.27
SRGAP3-201ENST00000360413 CYP1A1P04798 512 aaPredicted RBP13.36□□□□□ -0.27
SRGAP3-201ENST00000360413 ALDH9A1P49189 494 aa13.36□□□□□ -0.27
SRGAP3-201ENST00000360413 THOP1P52888 689 aa13.36□□□□□ -0.27
SRGAP3-201ENST00000360413 FRMD7Q6ZUT3 714 aa13.36□□□□□ -0.27
SRGAP3-201ENST00000360413 SPAG4Q9NPE6 437 aa13.36□□□□□ -0.27
SRGAP3-201ENST00000360413 SLC35C2Q9NQQ7 365 aa13.36□□□□□ -0.27
SRGAP3-201ENST00000360413 PTGFRNQ9P2B2 879 aa13.36□□□□□ -0.27
SRGAP3-201ENST00000360413 FBXL21Q9UKT6 434 aa13.36□□□□□ -0.27
SRGAP3-201ENST00000360413 GATBO75879 557 aaKnown RBP13.36□□□□□ -0.27
SRGAP3-201ENST00000360413 CBWD2Q8IUF1 395 aa13.36□□□□□ -0.27
SRGAP3-201ENST00000360413 MYH13Q9UKX3 1938 aa13.36□□□□□ -0.27
SRGAP3-201ENST00000360413 TRMUO75648 421 aaKnown RBP13.35□□□□□ -0.27
SRGAP3-201ENST00000360413 PRR23BQ6ZRT6 265 aa13.35□□□□□ -0.27
SRGAP3-201ENST00000360413 USP45Q70EL2 814 aa13.35□□□□□ -0.27
SRGAP3-201ENST00000360413 PHF12Q96QT6 1004 aa13.35□□□□□ -0.27
SRGAP3-201ENST00000360413 MRPL9Q9BYD2 267 aaKnown RBP13.35□□□□□ -0.27
SRGAP3-201ENST00000360413 CUEDC1Q9NWM3 386 aaPredicted RBP13.35□□□□□ -0.27
SRGAP3-201ENST00000360413 DPP3Q9NY33 737 aa13.35□□□□□ -0.27
SRGAP3-201ENST00000360413 GMIPQ9P107 970 aa13.35□□□□□ -0.27
SRGAP3-201ENST00000360413 OR14I1A6ND48 311 aa13.35□□□□□ -0.27
SRGAP3-201ENST00000360413 RBAK-RBAKDNI3L0D1 243 aa13.35□□□□□ -0.27
SRGAP3-201ENST00000360413 M0QYT0 321 aa13.35□□□□□ -0.27
SRGAP3-201ENST00000360413 ZNF432O94892 652 aa13.35□□□□□ -0.27
SRGAP3-201ENST00000360413 PRKAR2AP13861 404 aaKnown RBP13.35□□□□□ -0.27
SRGAP3-201ENST00000360413 POLR2EP19388 210 aaKnown RBP13.35□□□□□ -0.27
SRGAP3-201ENST00000360413 PDHA2P29803 388 aa13.35□□□□□ -0.27
SRGAP3-201ENST00000360413 EFCAB12Q6NXP0 572 aa13.35□□□□□ -0.27
SRGAP3-201ENST00000360413 OR56A4Q8NGH8 313 aa13.35□□□□□ -0.27
SRGAP3-201ENST00000360413 TATDN2Q93075 761 aa13.35□□□□□ -0.27
SRGAP3-201ENST00000360413 RERGQ96A58 199 aaPredicted RBP13.35□□□□□ -0.27
SRGAP3-201ENST00000360413 A0A0A6YYK5 440 aaPredicted RBP13.35□□□□□ -0.27
SRGAP3-201ENST00000360413 SNX3O60493 162 aa13.35□□□□□ -0.27
SRGAP3-201ENST00000360413 RBMXL2O75526 392 aaKnown RBP13.35□□□□□ -0.27
SRGAP3-201ENST00000360413 RPS6KA4O75676 772 aa13.35□□□□□ -0.27
SRGAP3-201ENST00000360413 RPL21P46778 160 aaKnown RBP13.35□□□□□ -0.27
SRGAP3-201ENST00000360413 KCNA10Q16322 511 aa13.35□□□□□ -0.27
SRGAP3-201ENST00000360413 SETMARQ53H47 684 aaPredicted RBP13.35□□□□□ -0.27
SRGAP3-201ENST00000360413 KLHL35Q6PF15 583 aa13.35□□□□□ -0.27
SRGAP3-201ENST00000360413 TTLL2Q9BWV7 592 aa13.35□□□□□ -0.27
SRGAP3-201ENST00000360413 GGA3Q9NZ52 723 aa13.35□□□□□ -0.27
SRGAP3-201ENST00000360413 ZNF521Q96K83 1311 aa13.35□□□□□ -0.27
SRGAP3-201ENST00000360413 SMCO3A2RU48 225 aa13.35□□□□□ -0.27
SRGAP3-201ENST00000360413 DPPA5A6NC42 116 aa13.35□□□□□ -0.27
SRGAP3-201ENST00000360413 NOTOA8MTQ0 251 aa13.35□□□□□ -0.27
SRGAP3-201ENST00000360413 CES2O00748 559 aa13.35□□□□□ -0.27
SRGAP3-201ENST00000360413 UPP2O95045 317 aa13.35□□□□□ -0.27
SRGAP3-201ENST00000360413 ZNF157P51786 506 aaPredicted RBP13.35□□□□□ -0.27
SRGAP3-201ENST00000360413 FAM92BQ6ZTR7 304 aa13.35□□□□□ -0.27
SRGAP3-201ENST00000360413 HPS6Q86YV9 775 aa13.35□□□□□ -0.27
SRGAP3-201ENST00000360413 LSM14AQ8ND56 463 aaKnown RBP13.35□□□□□ -0.27
SRGAP3-201ENST00000360413 PTCD3Q96EY7 689 aaKnown RBP13.35□□□□□ -0.27
SRGAP3-201ENST00000360413 CYP3A43Q9HB55 503 aa13.35□□□□□ -0.27
SRGAP3-201ENST00000360413 NEUROD4Q9HD90 331 aa13.35□□□□□ -0.27
SRGAP3-201ENST00000360413 GDF3Q9NR23 364 aa13.35□□□□□ -0.27
SRGAP3-201ENST00000360413 FBXO10Q9UK96 956 aa13.35□□□□□ -0.27
SRGAP3-201ENST00000360413 TRPM1Q7Z4N2 1603 aa13.35□□□□□ -0.27
SRGAP3-201ENST00000360413 SIN3BO75182 1162 aa13.35□□□□□ -0.27
SRGAP3-201ENST00000360413 CYP7B1O75881 506 aa13.35□□□□□ -0.27
SRGAP3-201ENST00000360413 RLN1P04808 185 aa13.35□□□□□ -0.27
SRGAP3-201ENST00000360413 MED22Q15528 200 aa13.35□□□□□ -0.27
SRGAP3-201ENST00000360413 PCDH20Q8N6Y1 951 aaKnown RBP13.35□□□□□ -0.27
SRGAP3-201ENST00000360413 ZNRF3Q9ULT6 936 aa13.35□□□□□ -0.27
SRGAP3-201ENST00000360413 SORCS3Q9UPU3 1222 aa13.35□□□□□ -0.27
SRGAP3-201ENST00000360413 RHOCP08134 193 aa13.35□□□□□ -0.27
SRGAP3-201ENST00000360413 KYAT3Q6YP21 454 aaKnown RBP13.35□□□□□ -0.27
SRGAP3-201ENST00000360413 SLC4A9Q96Q91 983 aa13.35□□□□□ -0.27
SRGAP3-201ENST00000360413 RHOBTB2Q9BYZ6 727 aa13.35□□□□□ -0.27
SRGAP3-201ENST00000360413 MGAT5Q09328 741 aa13.34□□□□□ -0.27
SRGAP3-201ENST00000360413 KCTD4Q8WVF5 259 aa13.34□□□□□ -0.27
SRGAP3-201ENST00000360413 MFSD1Q9H3U5 465 aa13.34□□□□□ -0.27
SRGAP3-201ENST00000360413 COG5Q9UP83 839 aa13.34□□□□□ -0.27
SRGAP3-201ENST00000360413 FAM172BPA6NC97 362 aa13.34□□□□□ -0.27
SRGAP3-201ENST00000360413 B3GAT3O94766 335 aa13.34□□□□□ -0.27
SRGAP3-201ENST00000360413 ADSLP30566 484 aaPredicted RBP13.34□□□□□ -0.27
SRGAP3-201ENST00000360413 OMPP47874 163 aa13.34□□□□□ -0.27
SRGAP3-201ENST00000360413 TUFMP49411 452 aaKnown RBP13.34□□□□□ -0.27
SRGAP3-201ENST00000360413 CCDC54Q8NEL0 328 aa13.34□□□□□ -0.27
SRGAP3-201ENST00000360413 BHLHE41Q9C0J9 482 aaPredicted RBP13.34□□□□□ -0.27
SRGAP3-201ENST00000360413 CAB39LQ9H9S4 337 aa13.34□□□□□ -0.27
SRGAP3-201ENST00000360413 PNPLA7Q6ZV29 1317 aa13.34□□□□□ -0.27
SRGAP3-201ENST00000360413 WFS1O76024 890 aa13.34□□□□□ -0.27
SRGAP3-201ENST00000360413 APOL3O95236 402 aa13.34□□□□□ -0.27
SRGAP3-201ENST00000360413 DCKP27707 260 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms