RNA–Protein interactions for RNA: ENST00000359759.8

COL18A1-203, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL18A1, Length 6,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-203ENST00000359759 NR2C2P49116 596 aa16.21■□□□□ 0.19
COL18A1-203ENST00000359759 CASP5P51878 434 aa16.21■□□□□ 0.19
COL18A1-203ENST00000359759 ZNF549Q6P9A3 640 aa16.21■□□□□ 0.19
COL18A1-203ENST00000359759 RASSF6Q6ZTQ3 369 aa16.21■□□□□ 0.19
COL18A1-203ENST00000359759 PJA1Q8NG27 643 aa16.21■□□□□ 0.19
COL18A1-203ENST00000359759 LENG1Q96BZ8 264 aaPredicted RBP16.21■□□□□ 0.19
COL18A1-203ENST00000359759 DSN1Q9H410 356 aa16.21■□□□□ 0.19
COL18A1-203ENST00000359759 RSL24D1Q9UHA3 163 aaKnown RBP16.21■□□□□ 0.19
COL18A1-203ENST00000359759 JCADQ9P266 1359 aa16.21■□□□□ 0.18
COL18A1-203ENST00000359759 SNRPB2P08579 225 aaKnown RBP16.21■□□□□ 0.18
COL18A1-203ENST00000359759 LINC00032P0C843 101 aa16.21■□□□□ 0.18
COL18A1-203ENST00000359759 CARTPTQ16568 116 aa16.21■□□□□ 0.18
COL18A1-203ENST00000359759 PPP1R26Q5T8A7 1209 aaPredicted RBP16.21■□□□□ 0.18
COL18A1-203ENST00000359759 IRAK1BP1Q5VVH5 260 aa16.21■□□□□ 0.18
COL18A1-203ENST00000359759 OVOS1Q6IE37 1185 aa16.21■□□□□ 0.18
COL18A1-203ENST00000359759 ZCCHC9Q8N567 271 aaKnown RBP16.21■□□□□ 0.18
COL18A1-203ENST00000359759 HTRA1Q92743 480 aa16.21■□□□□ 0.18
COL18A1-203ENST00000359759 DLG3Q92796 817 aa16.21■□□□□ 0.18
COL18A1-203ENST00000359759 RACGAP1Q9H0H5 632 aa16.21■□□□□ 0.18
COL18A1-203ENST00000359759 SLC12A4Q9UP95 1085 aa16.21■□□□□ 0.18
COL18A1-203ENST00000359759 MTF2Q9Y483 593 aaPredicted RBP16.21■□□□□ 0.18
COL18A1-203ENST00000359759 SCAMP3O14828 347 aaKnown RBP16.2■□□□□ 0.18
COL18A1-203ENST00000359759 LSM1O15116 133 aaKnown RBP16.2■□□□□ 0.18
COL18A1-203ENST00000359759 IGSF6O95976 241 aa16.2■□□□□ 0.18
COL18A1-203ENST00000359759 CYP1A1P04798 512 aaPredicted RBP16.2■□□□□ 0.18
COL18A1-203ENST00000359759 CLUP10909 449 aa16.2■□□□□ 0.18
COL18A1-203ENST00000359759 TKTP29401 623 aaKnown RBP16.2■□□□□ 0.18
COL18A1-203ENST00000359759 MIPP30301 263 aa16.2■□□□□ 0.18
COL18A1-203ENST00000359759 GRIA4P48058 902 aa16.2■□□□□ 0.18
COL18A1-203ENST00000359759 HUNKP57058 714 aa16.2■□□□□ 0.18
COL18A1-203ENST00000359759 SQLEQ14534 574 aa16.2■□□□□ 0.18
COL18A1-203ENST00000359759 KYAT3Q6YP21 454 aaKnown RBP16.2■□□□□ 0.18
COL18A1-203ENST00000359759 COLGALT2Q8IYK4 626 aa16.2■□□□□ 0.18
COL18A1-203ENST00000359759 DAW1Q8N136 415 aa16.2■□□□□ 0.18
COL18A1-203ENST00000359759 GRIN3AQ8TCU5 1115 aa16.2■□□□□ 0.18
COL18A1-203ENST00000359759 GIPC3Q8TF64 312 aa16.2■□□□□ 0.18
COL18A1-203ENST00000359759 SLC47A1Q96FL8 570 aa16.2■□□□□ 0.18
COL18A1-203ENST00000359759 FAM205AQ6ZU69 1335 aa16.2■□□□□ 0.18
COL18A1-203ENST00000359759 A0A0B4J269 797 aa16.2■□□□□ 0.18
COL18A1-203ENST00000359759 HAT1O14929 419 aa16.2■□□□□ 0.18
COL18A1-203ENST00000359759 CYP2A13Q16696 494 aa16.2■□□□□ 0.18
COL18A1-203ENST00000359759 KAT5Q92993 513 aa16.2■□□□□ 0.18
COL18A1-203ENST00000359759 TMEM165Q9HC07 324 aa16.2■□□□□ 0.18
COL18A1-203ENST00000359759 ING3Q9NXR8 418 aa16.2■□□□□ 0.18
COL18A1-203ENST00000359759 TMEM216Q9P0N5 145 aa16.2■□□□□ 0.18
COL18A1-203ENST00000359759 VPS51Q9UID3 782 aa16.2■□□□□ 0.18
COL18A1-203ENST00000359759 PRKAR1AP10644 381 aa16.2■□□□□ 0.18
COL18A1-203ENST00000359759 ARF4P18085 180 aaPredicted RBP16.2■□□□□ 0.18
COL18A1-203ENST00000359759 MMP13P45452 471 aa16.2■□□□□ 0.18
COL18A1-203ENST00000359759 MARSP56192 900 aaKnown RBP16.2■□□□□ 0.18
COL18A1-203ENST00000359759 FCHO2Q0JRZ9 810 aa16.2■□□□□ 0.18
COL18A1-203ENST00000359759 FAM131AQ6UXB0 335 aa16.2■□□□□ 0.18
COL18A1-203ENST00000359759 SLC2A14Q8TDB8 520 aa16.2■□□□□ 0.18
COL18A1-203ENST00000359759 CYP3A43Q9HB55 503 aa16.2■□□□□ 0.18
COL18A1-203ENST00000359759 KBTBD4Q9NVX7 518 aa16.2■□□□□ 0.18
COL18A1-203ENST00000359759 ALDH2P05091 517 aa16.2■□□□□ 0.18
COL18A1-203ENST00000359759 SREBF1P36956 1147 aa16.2■□□□□ 0.18
COL18A1-203ENST00000359759 TBX2Q13207 712 aaPredicted RBP16.2■□□□□ 0.18
COL18A1-203ENST00000359759 PLD1Q13393 1074 aa16.2■□□□□ 0.18
COL18A1-203ENST00000359759 DEF8Q6ZN54 512 aa16.2■□□□□ 0.18
COL18A1-203ENST00000359759 LEMD2Q8NC56 503 aa16.2■□□□□ 0.18
COL18A1-203ENST00000359759 TRPV3Q8NET8 790 aa16.2■□□□□ 0.18
COL18A1-203ENST00000359759 COPS4Q9BT78 406 aa16.2■□□□□ 0.18
COL18A1-203ENST00000359759 PRKD2Q9BZL6 878 aa16.2■□□□□ 0.18
COL18A1-203ENST00000359759 EXO5Q9H790 373 aa16.2■□□□□ 0.18
COL18A1-203ENST00000359759 ERGIC3Q9Y282 383 aa16.2■□□□□ 0.18
COL18A1-203ENST00000359759 FADS2O95864 444 aaKnown RBP16.2■□□□□ 0.18
COL18A1-203ENST00000359759 C9P02748 559 aa16.2■□□□□ 0.18
COL18A1-203ENST00000359759 CD86P42081 329 aa16.2■□□□□ 0.18
COL18A1-203ENST00000359759 SLC39A12Q504Y0 691 aa16.2■□□□□ 0.18
COL18A1-203ENST00000359759 AMER2Q8N7J2 671 aa16.2■□□□□ 0.18
COL18A1-203ENST00000359759 SLC38A2Q96QD8 506 aa16.2■□□□□ 0.18
COL18A1-203ENST00000359759 EGFL7Q9UHF1 273 aa16.2■□□□□ 0.18
COL18A1-203ENST00000359759 PCDHB5Q9Y5E4 795 aa16.2■□□□□ 0.18
COL18A1-203ENST00000359759 RECQL5O94762 991 aaPredicted RBP16.19■□□□□ 0.18
COL18A1-203ENST00000359759 CYP2A6P11509 494 aaPredicted RBP16.19■□□□□ 0.18
COL18A1-203ENST00000359759 CDK7P50613 346 aa16.19■□□□□ 0.18
COL18A1-203ENST00000359759 RPL38P63173 70 aaKnown RBP16.19■□□□□ 0.18
COL18A1-203ENST00000359759 PLGRKTQ9HBL7 147 aa16.19■□□□□ 0.18
COL18A1-203ENST00000359759 TRHDEQ9UKU6 1024 aa16.19■□□□□ 0.18
COL18A1-203ENST00000359759 LACTBL1A8MY62 500 aa16.19■□□□□ 0.18
COL18A1-203ENST00000359759 KPNA3O00505 521 aaPredicted RBP16.19■□□□□ 0.18
COL18A1-203ENST00000359759 C5orf22Q49AR2 442 aa16.19■□□□□ 0.18
COL18A1-203ENST00000359759 FAM171A1Q5VUB5 890 aa16.19■□□□□ 0.18
COL18A1-203ENST00000359759 AKAP14Q86UN6 197 aa16.19■□□□□ 0.18
COL18A1-203ENST00000359759 PTGR2Q8N8N7 351 aaPredicted RBP16.19■□□□□ 0.18
COL18A1-203ENST00000359759 RAD51AP1Q96B01 352 aa16.19■□□□□ 0.18
COL18A1-203ENST00000359759 SMARCD1Q96GM5 515 aa16.19■□□□□ 0.18
COL18A1-203ENST00000359759 GMCL1Q96IK5 515 aa16.19■□□□□ 0.18
COL18A1-203ENST00000359759 ARHGEF5Q12774 1597 aa16.19■□□□□ 0.18
COL18A1-203ENST00000359759 NPR3P17342 541 aa16.19■□□□□ 0.18
COL18A1-203ENST00000359759 CAMK1Q14012 370 aa16.19■□□□□ 0.18
COL18A1-203ENST00000359759 NEK7Q8TDX7 302 aa16.19■□□□□ 0.18
COL18A1-203ENST00000359759 GTF3C2Q8WUA4 911 aaPredicted RBP16.19■□□□□ 0.18
COL18A1-203ENST00000359759 OR10H3O60404 316 aa16.19■□□□□ 0.18
COL18A1-203ENST00000359759 LGR5O75473 907 aa16.19■□□□□ 0.18
COL18A1-203ENST00000359759 LTA4HP09960 611 aaKnown RBP16.19■□□□□ 0.18
COL18A1-203ENST00000359759 CDH3P22223 829 aa16.19■□□□□ 0.18
COL18A1-203ENST00000359759 HSF2Q03933 536 aa16.19■□□□□ 0.18
COL18A1-203ENST00000359759 FIGNQ5HY92 759 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms