RNA–Protein interactions for RNA: ENST00000359082.3

SHANK1-202, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 5 BASIC

Gene SHANK1, Length 6,459 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-202ENST00000359082 ZNF232Q9UNY5 417 aa18.58■□□□□ 0.56
SHANK1-202ENST00000359082 TECPR2O15040 1411 aa18.58■□□□□ 0.56
SHANK1-202ENST00000359082 BANF1O75531 89 aa18.58■□□□□ 0.56
SHANK1-202ENST00000359082 ADCYAP1R1P41586 468 aa18.58■□□□□ 0.56
SHANK1-202ENST00000359082 TMEM119Q4V9L6 283 aa18.58■□□□□ 0.56
SHANK1-202ENST00000359082 FAM183BPQ6ZVS7 135 aa18.58■□□□□ 0.56
SHANK1-202ENST00000359082 ZNF410Q86VK4 478 aa18.58■□□□□ 0.56
SHANK1-202ENST00000359082 CHPFQ8IZ52 775 aa18.58■□□□□ 0.56
SHANK1-202ENST00000359082 PNMA5Q96PV4 448 aa18.58■□□□□ 0.56
SHANK1-202ENST00000359082 NUAK2Q9H093 628 aa18.58■□□□□ 0.56
SHANK1-202ENST00000359082 CLN6Q9NWW5 311 aa18.58■□□□□ 0.56
SHANK1-202ENST00000359082 DYTNA2CJ06 578 aa18.58■□□□□ 0.56
SHANK1-202ENST00000359082 PEX11AO75192 247 aa18.58■□□□□ 0.56
SHANK1-202ENST00000359082 PYDC2Q56P42 97 aa18.58■□□□□ 0.56
SHANK1-202ENST00000359082 RAET1GQ6H3X3 334 aa18.58■□□□□ 0.56
SHANK1-202ENST00000359082 TRIM63Q969Q1 353 aa18.58■□□□□ 0.56
SHANK1-202ENST00000359082 AGLP35573 1532 aa18.58■□□□□ 0.56
SHANK1-202ENST00000359082 TISP43B9A030 160 aa18.57■□□□□ 0.56
SHANK1-202ENST00000359082 DDX3XO00571 662 aaKnown RBP eCLIP18.57■□□□□ 0.56
SHANK1-202ENST00000359082 CCDC166P0CW27 439 aa18.57■□□□□ 0.56
SHANK1-202ENST00000359082 DLG4P78352 724 aa18.57■□□□□ 0.56
SHANK1-202ENST00000359082 MRPL9Q9BYD2 267 aaKnown RBP18.57■□□□□ 0.56
SHANK1-202ENST00000359082 SLC12A4Q9UP95 1085 aa18.57■□□□□ 0.56
SHANK1-202ENST00000359082 TBC1D3BA6NDS4 549 aa18.57■□□□□ 0.56
SHANK1-202ENST00000359082 TSPAN8P19075 237 aa18.57■□□□□ 0.56
SHANK1-202ENST00000359082 SPIRE1Q08AE8 756 aa18.57■□□□□ 0.56
SHANK1-202ENST00000359082 HSPA14Q0VDF9 509 aa18.57■□□□□ 0.56
SHANK1-202ENST00000359082 MSLNQ13421 630 aaPredicted RBP18.57■□□□□ 0.56
SHANK1-202ENST00000359082 RRP1BQ14684 758 aaKnown RBP18.57■□□□□ 0.56
SHANK1-202ENST00000359082 AP5B1Q2VPB7 878 aa18.57■□□□□ 0.56
SHANK1-202ENST00000359082 PCID2Q5JVF3 399 aa18.57■□□□□ 0.56
SHANK1-202ENST00000359082 STXBP5Q5T5C0 1151 aa18.57■□□□□ 0.56
SHANK1-202ENST00000359082 VCPIP1Q96JH7 1222 aa18.57■□□□□ 0.56
SHANK1-202ENST00000359082 PDCD10Q9BUL8 212 aa18.57■□□□□ 0.56
SHANK1-202ENST00000359082 ASB8Q9H765 288 aa18.57■□□□□ 0.56
SHANK1-202ENST00000359082 FAM237BA0A1B0GVD1 139 aa18.57■□□□□ 0.56
SHANK1-202ENST00000359082 ANXA5P08758 320 aa18.57■□□□□ 0.56
SHANK1-202ENST00000359082 CDC25CP30307 473 aa18.57■□□□□ 0.56
SHANK1-202ENST00000359082 GRIA3P42263 894 aa18.57■□□□□ 0.56
SHANK1-202ENST00000359082 LRRN4Q8WUT4 740 aa18.57■□□□□ 0.56
SHANK1-202ENST00000359082 EEF1AKMT1Q8WVE0 214 aa18.57■□□□□ 0.56
SHANK1-202ENST00000359082 QRFPRQ96P65 431 aa18.57■□□□□ 0.56
SHANK1-202ENST00000359082 ELL3Q9HB65 397 aaPredicted RBP18.57■□□□□ 0.56
SHANK1-202ENST00000359082 TMPRSS4Q9NRS4 437 aa18.57■□□□□ 0.56
SHANK1-202ENST00000359082 PPP2R3BQ9Y5P8 575 aa18.57■□□□□ 0.56
SHANK1-202ENST00000359082 TLX1P31314 330 aaPredicted RBP18.57■□□□□ 0.56
SHANK1-202ENST00000359082 RPL4P36578 427 aaKnown RBP18.57■□□□□ 0.56
SHANK1-202ENST00000359082 LLGL2Q6P1M3 1020 aa18.57■□□□□ 0.56
SHANK1-202ENST00000359082 RPTNQ6XPR3 784 aa18.57■□□□□ 0.56
SHANK1-202ENST00000359082 MBOAT7Q96N66 472 aa18.57■□□□□ 0.56
SHANK1-202ENST00000359082 ITSN1Q15811 1721 aa18.57■□□□□ 0.56
SHANK1-202ENST00000359082 APOC4-APOC2K7ER74 178 aa18.57■□□□□ 0.56
SHANK1-202ENST00000359082 TNFRSF21O75509 655 aa18.57■□□□□ 0.56
SHANK1-202ENST00000359082 APOC2P02655 101 aa18.57■□□□□ 0.56
SHANK1-202ENST00000359082 ATP5BP06576 529 aaKnown RBP18.57■□□□□ 0.56
SHANK1-202ENST00000359082 THOP1P52888 689 aa18.57■□□□□ 0.56
SHANK1-202ENST00000359082 PSMD4P55036 377 aaKnown RBP18.57■□□□□ 0.56
SHANK1-202ENST00000359082 FSCN1Q16658 493 aaKnown RBP18.57■□□□□ 0.56
SHANK1-202ENST00000359082 EARS2Q5JPH6 523 aaKnown RBP18.57■□□□□ 0.56
SHANK1-202ENST00000359082 OFCC1Q8IZS5 231 aa18.57■□□□□ 0.56
SHANK1-202ENST00000359082 PARP8Q8N3A8 854 aa18.57■□□□□ 0.56
SHANK1-202ENST00000359082 VPS35Q96QK1 796 aa18.57■□□□□ 0.56
SHANK1-202ENST00000359082 MFSD1Q9H3U5 465 aa18.57■□□□□ 0.56
SHANK1-202ENST00000359082 ASB7Q9H672 318 aa18.57■□□□□ 0.56
SHANK1-202ENST00000359082 NRDE2Q9H7Z3 1164 aa18.57■□□□□ 0.56
SHANK1-202ENST00000359082 ZFP14Q9HCL3 533 aa18.57■□□□□ 0.56
SHANK1-202ENST00000359082 ZNF222Q9UK12 451 aa18.57■□□□□ 0.56
SHANK1-202ENST00000359082 IKZF3Q9UKT9 509 aa18.57■□□□□ 0.56
SHANK1-202ENST00000359082 GCNT1Q02742 428 aa18.56■□□□□ 0.56
SHANK1-202ENST00000359082 SQLEQ14534 574 aa18.56■□□□□ 0.56
SHANK1-202ENST00000359082 MZT2BQ6NZ67 158 aa18.56■□□□□ 0.56
SHANK1-202ENST00000359082 GCNT7Q6ZNI0 430 aa18.56■□□□□ 0.56
SHANK1-202ENST00000359082 DENND1CQ8IV53 801 aa18.56■□□□□ 0.56
SHANK1-202ENST00000359082 STK32AQ8WU08 396 aa18.56■□□□□ 0.56
SHANK1-202ENST00000359082 MARCH2Q9P0N8 246 aa18.56■□□□□ 0.56
SHANK1-202ENST00000359082 SGTAO43765 313 aa18.56■□□□□ 0.56
SHANK1-202ENST00000359082 TBL1XO60907 577 aa18.56■□□□□ 0.56
SHANK1-202ENST00000359082 ECDO95905 644 aaPredicted RBP18.56■□□□□ 0.56
SHANK1-202ENST00000359082 ADARP55265 1226 aaKnown RBP18.56■□□□□ 0.56
SHANK1-202ENST00000359082 ILF2Q12905 390 aaKnown RBP18.56■□□□□ 0.56
SHANK1-202ENST00000359082 ACVR2BQ13705 512 aa18.56■□□□□ 0.56
SHANK1-202ENST00000359082 FAM171BQ6P995 826 aa18.56■□□□□ 0.56
SHANK1-202ENST00000359082 HIPK1Q86Z02 1210 aa18.56■□□□□ 0.56
SHANK1-202ENST00000359082 PTGR2Q8N8N7 351 aaPredicted RBP18.56■□□□□ 0.56
SHANK1-202ENST00000359082 SMYD1Q8NB12 490 aa18.56■□□□□ 0.56
SHANK1-202ENST00000359082 GPR156Q8NFN8 814 aa18.56■□□□□ 0.56
SHANK1-202ENST00000359082 BTBD7Q9P203 1132 aa18.56■□□□□ 0.56
SHANK1-202ENST00000359082 OGDHLQ9ULD0 1010 aa18.56■□□□□ 0.56
SHANK1-202ENST00000359082 TNPO3Q9Y5L0 923 aaKnown RBP18.56■□□□□ 0.56
SHANK1-202ENST00000359082 TP73O15350 636 aa18.56■□□□□ 0.56
SHANK1-202ENST00000359082 SKP1P63208 163 aa18.56■□□□□ 0.56
SHANK1-202ENST00000359082 SLC45A4Q5BKX6 768 aa18.56■□□□□ 0.56
SHANK1-202ENST00000359082 NELL1Q92832 810 aa18.56■□□□□ 0.56
SHANK1-202ENST00000359082 ATAD3AQ9NVI7 634 aa18.56■□□□□ 0.56
SHANK1-202ENST00000359082 KCNK4Q9NYG8 393 aa18.56■□□□□ 0.56
SHANK1-202ENST00000359082 A0A0B4J269 797 aa18.56■□□□□ 0.56
SHANK1-202ENST00000359082 ACKR2O00590 384 aa18.56■□□□□ 0.56
SHANK1-202ENST00000359082 OR10H2O60403 315 aa18.56■□□□□ 0.56
SHANK1-202ENST00000359082 AKR1A1P14550 325 aa18.56■□□□□ 0.56
SHANK1-202ENST00000359082 SHMT1P34896 483 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms