RNA–Protein interactions for RNA: ENST00000358528.8

CSDE1-203, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDE1, Length 4,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-203ENST00000358528 HASPINQ8TF76 798 aa6.66□□□□□ -1.34
CSDE1-203ENST00000358528 R3HDMLQ9H3Y0 253 aa6.66□□□□□ -1.34
CSDE1-203ENST00000358528 TUT1Q9H6E5 874 aaKnown RBP6.66□□□□□ -1.34
CSDE1-203ENST00000358528 DNAAF2Q9NVR5 837 aaKnown RBP6.66□□□□□ -1.34
CSDE1-203ENST00000358528 DDX43Q9NXZ2 648 aaKnown RBP6.66□□□□□ -1.34
CSDE1-203ENST00000358528 DMTF1Q9Y222 760 aa6.66□□□□□ -1.34
CSDE1-203ENST00000358528 TAF1LQ8IZX4 1826 aa6.66□□□□□ -1.34
CSDE1-203ENST00000358528 HACD1B0YJ81 288 aa6.66□□□□□ -1.34
CSDE1-203ENST00000358528 E7ENX8 843 aa6.66□□□□□ -1.34
CSDE1-203ENST00000358528 TSPAN3O60637 253 aa6.66□□□□□ -1.34
CSDE1-203ENST00000358528 APOA4P06727 396 aa6.66□□□□□ -1.34
CSDE1-203ENST00000358528 TFPTP0C1Z6 253 aa6.66□□□□□ -1.34
CSDE1-203ENST00000358528 CCDC166P0CW27 439 aa6.66□□□□□ -1.34
CSDE1-203ENST00000358528 ZNF23P17027 643 aa6.66□□□□□ -1.34
CSDE1-203ENST00000358528 UGT1A6P19224 532 aa6.66□□□□□ -1.34
CSDE1-203ENST00000358528 PTPN3P26045 913 aa6.66□□□□□ -1.34
CSDE1-203ENST00000358528 TAF6P49848 677 aa6.66□□□□□ -1.34
CSDE1-203ENST00000358528 XIAPP98170 497 aa6.66□□□□□ -1.34
CSDE1-203ENST00000358528 CDKL1Q00532 357 aa6.66□□□□□ -1.34
CSDE1-203ENST00000358528 CAPRIN1Q14444 709 aaKnown RBP6.66□□□□□ -1.34
CSDE1-203ENST00000358528 HFE2Q6ZVN8 426 aa6.66□□□□□ -1.34
CSDE1-203ENST00000358528 RAB44Q7Z6P3 723 aaPredicted RBP6.66□□□□□ -1.34
CSDE1-203ENST00000358528 ANKRD52Q8NB46 1076 aa6.66□□□□□ -1.34
CSDE1-203ENST00000358528 ZNF560Q96MR9 790 aa6.66□□□□□ -1.34
CSDE1-203ENST00000358528 EIF2AQ9BY44 585 aaKnown RBP6.66□□□□□ -1.34
CSDE1-203ENST00000358528 TKTL2Q9H0I9 626 aa6.66□□□□□ -1.34
CSDE1-203ENST00000358528 CXCL16Q9H2A7 254 aa6.66□□□□□ -1.34
CSDE1-203ENST00000358528 CCDC68Q9H2F9 335 aa6.66□□□□□ -1.34
CSDE1-203ENST00000358528 ALG9Q9H6U8 611 aa6.66□□□□□ -1.34
CSDE1-203ENST00000358528 GPRC5DQ9NZD1 345 aa6.66□□□□□ -1.34
CSDE1-203ENST00000358528 TMCO1Q9UM00 188 aa6.66□□□□□ -1.34
CSDE1-203ENST00000358528 COPG1Q9Y678 874 aaKnown RBP6.66□□□□□ -1.34
CSDE1-203ENST00000358528 TLL2Q9Y6L7 1015 aa6.66□□□□□ -1.34
CSDE1-203ENST00000358528 CROCCQ5TZA2 2017 aa6.66□□□□□ -1.34
CSDE1-203ENST00000358528 LGALS2P05162 132 aa6.66□□□□□ -1.34
CSDE1-203ENST00000358528 NR4A1P22736 598 aa6.66□□□□□ -1.34
CSDE1-203ENST00000358528 ADCYAP1R1P41586 468 aa6.66□□□□□ -1.34
CSDE1-203ENST00000358528 PSMD7P51665 324 aa6.66□□□□□ -1.34
CSDE1-203ENST00000358528 VGLL4Q14135 290 aa6.66□□□□□ -1.34
CSDE1-203ENST00000358528 PLCL1Q15111 1095 aa6.66□□□□□ -1.34
CSDE1-203ENST00000358528 INSCQ1MX18 579 aa6.66□□□□□ -1.34
CSDE1-203ENST00000358528 ESRP1Q6NXG1 681 aaKnown RBP6.66□□□□□ -1.34
CSDE1-203ENST00000358528 UGT2A3Q6UWM9 527 aa6.66□□□□□ -1.34
CSDE1-203ENST00000358528 KBTBD6Q86V97 674 aa6.66□□□□□ -1.34
CSDE1-203ENST00000358528 PGAM4Q8N0Y7 254 aa6.66□□□□□ -1.34
CSDE1-203ENST00000358528 ADCY4Q8NFM4 1077 aa6.66□□□□□ -1.34
CSDE1-203ENST00000358528 DNAJB14Q8TBM8 379 aa6.66□□□□□ -1.34
CSDE1-203ENST00000358528 DCPSQ96C86 337 aaKnown RBP6.66□□□□□ -1.34
CSDE1-203ENST00000358528 EML4Q9HC35 981 aaKnown RBP6.66□□□□□ -1.34
CSDE1-203ENST00000358528 TBC1D23Q9NUY8 699 aa6.66□□□□□ -1.34
CSDE1-203ENST00000358528 GIMAP2Q9UG22 337 aa6.66□□□□□ -1.34
CSDE1-203ENST00000358528 OR12D3Q9UGF7 316 aa6.66□□□□□ -1.34
CSDE1-203ENST00000358528 RAB26Q9ULW5 256 aa6.66□□□□□ -1.34
CSDE1-203ENST00000358528 CLOCKO15516 846 aa6.65□□□□□ -1.34
CSDE1-203ENST00000358528 DYNC1LI2O43237 492 aaPredicted RBP6.65□□□□□ -1.34
CSDE1-203ENST00000358528 TADA2AO75478 443 aa6.65□□□□□ -1.34
CSDE1-203ENST00000358528 TFAP2AP05549 437 aa6.65□□□□□ -1.34
CSDE1-203ENST00000358528 MLNP12872 115 aa6.65□□□□□ -1.34
CSDE1-203ENST00000358528 INPP5AQ14642 412 aa6.65□□□□□ -1.34
CSDE1-203ENST00000358528 LPIN1Q14693 890 aa6.65□□□□□ -1.34
CSDE1-203ENST00000358528 FAM219BQ5XKK7 198 aa6.65□□□□□ -1.34
CSDE1-203ENST00000358528 WSCD1Q658N2 575 aa6.65□□□□□ -1.34
CSDE1-203ENST00000358528 TRIM74Q86UV6 250 aa6.65□□□□□ -1.34
CSDE1-203ENST00000358528 TRIM73Q86UV7 250 aa6.65□□□□□ -1.34
CSDE1-203ENST00000358528 SPPL2CQ8IUH8 684 aa6.65□□□□□ -1.34
CSDE1-203ENST00000358528 APOBEC3FQ8IUX4 373 aaKnown RBP6.65□□□□□ -1.34
CSDE1-203ENST00000358528 NAT16Q8N8M0 369 aa6.65□□□□□ -1.34
CSDE1-203ENST00000358528 PCYOX1LQ8NBM8 494 aa6.65□□□□□ -1.34
CSDE1-203ENST00000358528 OR52K2Q8NGK3 314 aa6.65□□□□□ -1.34
CSDE1-203ENST00000358528 GABPB2Q8TAK5 448 aaPredicted RBP6.65□□□□□ -1.34
CSDE1-203ENST00000358528 MAGEE2Q8TD90 523 aaPredicted RBP6.65□□□□□ -1.34
CSDE1-203ENST00000358528 WNT8BQ93098 351 aa6.65□□□□□ -1.34
CSDE1-203ENST00000358528 DRC3Q9H069 523 aa6.65□□□□□ -1.34
CSDE1-203ENST00000358528 MRPL40Q9NQ50 206 aaKnown RBP6.65□□□□□ -1.34
CSDE1-203ENST00000358528 RBM22Q9NW64 420 aaKnown RBP eCLIP6.65□□□□□ -1.347e-6■■■■□ 24.6
CSDE1-203ENST00000358528 BTRCQ9Y297 605 aa6.65□□□□□ -1.34
CSDE1-203ENST00000358528 ZNFX1Q9P2E3 1918 aaKnown RBP6.65□□□□□ -1.34
CSDE1-203ENST00000358528 ERI2A8K979 691 aaKnown RBP6.65□□□□□ -1.35
CSDE1-203ENST00000358528 TMEM114B3SHH9 223 aa6.65□□□□□ -1.35
CSDE1-203ENST00000358528 FAM72CH0Y354 149 aa6.65□□□□□ -1.35
CSDE1-203ENST00000358528 IRF6O14896 467 aa6.65□□□□□ -1.35
CSDE1-203ENST00000358528 ATP6V1G1O75348 118 aa6.65□□□□□ -1.35
CSDE1-203ENST00000358528 CABYRO75952 493 aa6.65□□□□□ -1.35
CSDE1-203ENST00000358528 HMBSP08397 361 aa6.65□□□□□ -1.35
CSDE1-203ENST00000358528 CYP2C9P11712 490 aa6.65□□□□□ -1.35
CSDE1-203ENST00000358528 ICAM3P32942 547 aa6.65□□□□□ -1.35
CSDE1-203ENST00000358528 EPHX2P34913 555 aa6.65□□□□□ -1.35
CSDE1-203ENST00000358528 YAP1P46937 504 aaKnown RBP6.65□□□□□ -1.35
CSDE1-203ENST00000358528 STT3AP46977 705 aa6.65□□□□□ -1.35
CSDE1-203ENST00000358528 CD151P48509 253 aa6.65□□□□□ -1.35
CSDE1-203ENST00000358528 CSE1LP55060 971 aaKnown RBP6.65□□□□□ -1.35
CSDE1-203ENST00000358528 MAXP61244 160 aa6.65□□□□□ -1.35
CSDE1-203ENST00000358528 TRAF2Q12933 501 aa6.65□□□□□ -1.35
CSDE1-203ENST00000358528 PPP1R3AQ16821 1122 aa6.65□□□□□ -1.35
CSDE1-203ENST00000358528 NOMO2Q5JPE7 1267 aa6.65□□□□□ -1.35
CSDE1-203ENST00000358528 FAM72AQ5TYM5 149 aa6.65□□□□□ -1.35
CSDE1-203ENST00000358528 ARHGAP17Q68EM7 881 aa6.65□□□□□ -1.35
CSDE1-203ENST00000358528 FAM72DQ6L9T8 149 aa6.65□□□□□ -1.35
CSDE1-203ENST00000358528 TIFABQ6ZNK6 161 aa6.65□□□□□ -1.35
CSDE1-203ENST00000358528 SLC26A9Q7LBE3 791 aa6.65□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms