RNA–Protein interactions for RNA: ENST00000357395.7

SYNE2-203, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 5 BASIC

Gene SYNE2, Length 21,555 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-203ENST00000357395 SLX4IPQ5VYV7 408 aa4.72□□□□□ -1.65
SYNE2-203ENST00000357395 RETREG3Q86VR2 466 aa4.72□□□□□ -1.65
SYNE2-203ENST00000357395 SUPT20HQ8NEM7 779 aa4.72□□□□□ -1.65
SYNE2-203ENST00000357395 SLC20A1Q8WUM9 679 aa4.72□□□□□ -1.65
SYNE2-203ENST00000357395 MRPL57Q9BQC6 102 aaKnown RBP4.72□□□□□ -1.65
SYNE2-203ENST00000357395 S100A14Q9HCY8 104 aa4.72□□□□□ -1.65
SYNE2-203ENST00000357395 GTSE1Q9NYZ3 720 aa4.72□□□□□ -1.65
SYNE2-203ENST00000357395 AQP12BA6NM10 295 aa4.72□□□□□ -1.65
SYNE2-203ENST00000357395 ANXA3P12429 323 aa4.72□□□□□ -1.65
SYNE2-203ENST00000357395 AQP12AQ8IXF9 295 aa4.72□□□□□ -1.65
SYNE2-203ENST00000357395 METTL25Q8N6Q8 603 aa4.72□□□□□ -1.65
SYNE2-203ENST00000357395 OXCT2Q9BYC2 517 aaPredicted RBP4.72□□□□□ -1.65
SYNE2-203ENST00000357395 NFAT5O94916 1531 aa4.72□□□□□ -1.65
SYNE2-203ENST00000357395 ABCA1O95477 2261 aa4.72□□□□□ -1.65
SYNE2-203ENST00000357395 DNMT1P26358 1616 aaKnown RBP4.72□□□□□ -1.65
SYNE2-203ENST00000357395 PIGNO95427 931 aa4.72□□□□□ -1.65
SYNE2-203ENST00000357395 TAS2R43P59537 309 aa4.72□□□□□ -1.65
SYNE2-203ENST00000357395 EEF1AKMT1Q8WVE0 214 aa4.72□□□□□ -1.65
SYNE2-203ENST00000357395 EXOSC4Q9NPD3 245 aaKnown RBP4.72□□□□□ -1.65
SYNE2-203ENST00000357395 RUVBL1Q9Y265 456 aaKnown RBP4.72□□□□□ -1.65
SYNE2-203ENST00000357395 FAM237AA0A1B0GTK4 181 aa4.72□□□□□ -1.65
SYNE2-203ENST00000357395 LYNP07948 512 aa4.72□□□□□ -1.65
SYNE2-203ENST00000357395 CRY1Q16526 586 aa4.72□□□□□ -1.65
SYNE2-203ENST00000357395 SPATA18Q8TC71 538 aa4.72□□□□□ -1.65
SYNE2-203ENST00000357395 IFT27Q9BW83 186 aa4.72□□□□□ -1.65
SYNE2-203ENST00000357395 ANO3Q9BYT9 981 aa4.72□□□□□ -1.65
SYNE2-203ENST00000357395 CALML5Q9NZT1 146 aa4.72□□□□□ -1.65
SYNE2-203ENST00000357395 CPDO75976 1380 aa4.72□□□□□ -1.65
SYNE2-203ENST00000357395 RANP62826 216 aaKnown RBP4.72□□□□□ -1.65
SYNE2-203ENST00000357395 MSANTD1Q6ZTZ1 278 aa4.72□□□□□ -1.65
SYNE2-203ENST00000357395 CLNKQ7Z7G1 428 aa4.72□□□□□ -1.65
SYNE2-203ENST00000357395 DCAF4Q8WV16 495 aa4.72□□□□□ -1.65
SYNE2-203ENST00000357395 GFM1Q96RP9 751 aaKnown RBP4.72□□□□□ -1.65
SYNE2-203ENST00000357395 QRSL1Q9H0R6 528 aaKnown RBP4.72□□□□□ -1.65
SYNE2-203ENST00000357395 OR51B5Q9H339 312 aa4.72□□□□□ -1.65
SYNE2-203ENST00000357395 LRRC4Q9HBW1 653 aa4.72□□□□□ -1.65
SYNE2-203ENST00000357395 ARHGEF4Q9NR80 690 aa4.72□□□□□ -1.65
SYNE2-203ENST00000357395 SLC30A4O14863 429 aa4.72□□□□□ -1.65
SYNE2-203ENST00000357395 NUAK1O60285 661 aa4.72□□□□□ -1.65
SYNE2-203ENST00000357395 EFNA1P20827 205 aaPredicted RBP4.72□□□□□ -1.65
SYNE2-203ENST00000357395 PNLIPRP1P54315 467 aa4.72□□□□□ -1.65
SYNE2-203ENST00000357395 HUNKP57058 714 aa4.72□□□□□ -1.65
SYNE2-203ENST00000357395 ELP2Q6IA86 826 aa4.72□□□□□ -1.65
SYNE2-203ENST00000357395 CLEC4GQ6UXB4 293 aa4.72□□□□□ -1.65
SYNE2-203ENST00000357395 METTL23Q86XA0 190 aa4.72□□□□□ -1.65
SYNE2-203ENST00000357395 LRRC34Q8IZ02 419 aa4.72□□□□□ -1.65
SYNE2-203ENST00000357395 MEN1O00255 615 aa4.72□□□□□ -1.65
SYNE2-203ENST00000357395 TECP42680 631 aa4.72□□□□□ -1.65
SYNE2-203ENST00000357395 MAPK10P53779 464 aa4.72□□□□□ -1.65
SYNE2-203ENST00000357395 C4orf50Q6ZRC1 276 aa4.72□□□□□ -1.65
SYNE2-203ENST00000357395 SCUBE3Q8IX30 993 aa4.72□□□□□ -1.65
SYNE2-203ENST00000357395 PGAP3Q96FM1 320 aaPredicted RBP4.72□□□□□ -1.65
SYNE2-203ENST00000357395 NODALQ96S42 347 aa4.72□□□□□ -1.65
SYNE2-203ENST00000357395 SSX3Q99909 188 aa4.72□□□□□ -1.65
SYNE2-203ENST00000357395 XPNPEP1Q9NQW7 623 aa4.72□□□□□ -1.65
SYNE2-203ENST00000357395 RAD51CO43502 376 aa4.72□□□□□ -1.65
SYNE2-203ENST00000357395 IL7P13232 177 aa4.72□□□□□ -1.65
SYNE2-203ENST00000357395 TAF12Q16514 161 aa4.72□□□□□ -1.65
SYNE2-203ENST00000357395 COL28A1Q2UY09 1125 aa4.72□□□□□ -1.65
SYNE2-203ENST00000357395 TBCDQ9BTW9 1192 aa4.72□□□□□ -1.65
SYNE2-203ENST00000357395 PCDHB16Q9NRJ7 776 aa4.72□□□□□ -1.65
SYNE2-203ENST00000357395 AP4B1Q9Y6B7 739 aa4.72□□□□□ -1.65
SYNE2-203ENST00000357395 GRIN2DO15399 1336 aa4.72□□□□□ -1.65
SYNE2-203ENST00000357395 MOCS2O96007 188 aaPredicted RBP4.72□□□□□ -1.65
SYNE2-203ENST00000357395 RARBP10826 455 aa4.72□□□□□ -1.65
SYNE2-203ENST00000357395 GNAZP19086 355 aa4.72□□□□□ -1.65
SYNE2-203ENST00000357395 LSAMPQ13449 338 aa4.72□□□□□ -1.65
SYNE2-203ENST00000357395 C1orf189Q5VU69 101 aa4.72□□□□□ -1.65
SYNE2-203ENST00000357395 VANGL1Q8TAA9 524 aaPredicted RBP4.72□□□□□ -1.65
SYNE2-203ENST00000357395 SLC13A1Q9BZW2 595 aa4.72□□□□□ -1.65
SYNE2-203ENST00000357395 CACFD1Q9UGQ2 172 aa4.72□□□□□ -1.65
SYNE2-203ENST00000357395 E9PBE3 544 aa4.72□□□□□ -1.65
SYNE2-203ENST00000357395 MCCD1P59942 119 aaPredicted RBP4.72□□□□□ -1.65
SYNE2-203ENST00000357395 NFX1Q12986 1120 aaKnown RBP4.72□□□□□ -1.65
SYNE2-203ENST00000357395 ADGRF2Q8IZF7 708 aa4.72□□□□□ -1.65
SYNE2-203ENST00000357395 PPM1NQ8N819 430 aa4.72□□□□□ -1.65
SYNE2-203ENST00000357395 DDX51Q8N8A6 666 aaKnown RBP eCLIP4.72□□□□□ -1.65
SYNE2-203ENST00000357395 CALN1Q9BXU9 219 aa4.72□□□□□ -1.65
SYNE2-203ENST00000357395 KAT8Q9H7Z6 458 aaKnown RBP4.72□□□□□ -1.65
SYNE2-203ENST00000357395 SLCO1B3Q9NPD5 702 aa4.72□□□□□ -1.65
SYNE2-203ENST00000357395 ZNF224Q9NZL3 707 aa4.72□□□□□ -1.65
SYNE2-203ENST00000357395 MORF4L1Q9UBU8 362 aa4.72□□□□□ -1.65
SYNE2-203ENST00000357395 ALG5Q9Y673 324 aa4.72□□□□□ -1.65
SYNE2-203ENST00000357395 E5RI56 91 aa4.72□□□□□ -1.65
SYNE2-203ENST00000357395 PGRMC2O15173 223 aa4.72□□□□□ -1.65
SYNE2-203ENST00000357395 ANXA1P04083 346 aa4.72□□□□□ -1.65
SYNE2-203ENST00000357395 GYPCP04921 128 aa4.72□□□□□ -1.65
SYNE2-203ENST00000357395 HLA-EP13747 358 aa4.72□□□□□ -1.65
SYNE2-203ENST00000357395 FAM160B2Q86V87 743 aa4.72□□□□□ -1.65
SYNE2-203ENST00000357395 HEPHQ9BQS7 1158 aa4.72□□□□□ -1.65
SYNE2-203ENST00000357395 CORO1BQ9BR76 489 aa4.72□□□□□ -1.65
SYNE2-203ENST00000357395 GSDMCQ9BYG8 508 aa4.72□□□□□ -1.65
SYNE2-203ENST00000357395 NT5DC2Q9H857 520 aa4.72□□□□□ -1.65
SYNE2-203ENST00000357395 CNOT8Q9UFF9 292 aaKnown RBP4.72□□□□□ -1.65
SYNE2-203ENST00000357395 PCDHGB2Q9Y5G2 931 aa4.72□□□□□ -1.65
SYNE2-203ENST00000357395 SMLR1H3BR10 107 aa4.72□□□□□ -1.65
SYNE2-203ENST00000357395 SPARCP09486 303 aa4.72□□□□□ -1.65
SYNE2-203ENST00000357395 XRCC1P18887 633 aaPredicted RBP4.72□□□□□ -1.65
SYNE2-203ENST00000357395 DPY19L1Q2PZI1 675 aa4.72□□□□□ -1.65
SYNE2-203ENST00000357395 HKDC1Q2TB90 917 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms