RNA–Protein interactions for RNA: ENST00000357348.9

RTFDC1-202, Transcript of Protein RTF2 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTFDC1, Length 2,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-202ENST00000357348 NGRNQ9NPE2 291 aaKnown RBP12.9□□□□□ -0.34
RTFDC1-202ENST00000357348 MRPL17Q9NRX2 175 aaKnown RBP12.9□□□□□ -0.34
RTFDC1-202ENST00000357348 ADAMTS6Q9UKP5 1117 aa12.9□□□□□ -0.34
RTFDC1-202ENST00000357348 TMCO1Q9UM00 188 aa12.9□□□□□ -0.34
RTFDC1-202ENST00000357348 USP18Q9UMW8 372 aa12.9□□□□□ -0.34
RTFDC1-202ENST00000357348 PDE4DIPQ5VU43 2346 aa12.9□□□□□ -0.34
RTFDC1-202ENST00000357348 C2CD4BA6NLJ0 364 aa12.9□□□□□ -0.34
RTFDC1-202ENST00000357348 ZBED1O96006 694 aa12.9□□□□□ -0.34
RTFDC1-202ENST00000357348 VCLP18206 1134 aa12.9□□□□□ -0.34
RTFDC1-202ENST00000357348 CNTFP26441 200 aa12.9□□□□□ -0.34
RTFDC1-202ENST00000357348 PPM1AP35813 382 aa12.9□□□□□ -0.34
RTFDC1-202ENST00000357348 RPL34P49207 117 aaKnown RBP12.9□□□□□ -0.34
RTFDC1-202ENST00000357348 PGFP49763 221 aa12.9□□□□□ -0.34
RTFDC1-202ENST00000357348 SNX16P57768 344 aa12.9□□□□□ -0.34
RTFDC1-202ENST00000357348 ERVFC1P60507 584 aa12.9□□□□□ -0.34
RTFDC1-202ENST00000357348 USP46P62068 366 aa12.9□□□□□ -0.34
RTFDC1-202ENST00000357348 PITX1P78337 314 aaPredicted RBP12.9□□□□□ -0.34
RTFDC1-202ENST00000357348 DCAF6Q58WW2 860 aa12.9□□□□□ -0.34
RTFDC1-202ENST00000357348 TEDDM1Q5T9Z0 273 aa12.9□□□□□ -0.34
RTFDC1-202ENST00000357348 SYPL2Q5VXT5 272 aa12.9□□□□□ -0.34
RTFDC1-202ENST00000357348 MBLAC2Q68D91 279 aa12.9□□□□□ -0.34
RTFDC1-202ENST00000357348 SCYL2Q6P3W7 929 aa12.9□□□□□ -0.34
RTFDC1-202ENST00000357348 UGT2A3Q6UWM9 527 aa12.9□□□□□ -0.34
RTFDC1-202ENST00000357348 NPNTQ6UXI9 565 aa12.9□□□□□ -0.34
RTFDC1-202ENST00000357348 DEFB106AQ8N104 65 aa12.9□□□□□ -0.34
RTFDC1-202ENST00000357348 SLC25A41Q8N5S1 370 aa12.9□□□□□ -0.34
RTFDC1-202ENST00000357348 PIWIL2Q8TC59 973 aaKnown RBP12.9□□□□□ -0.34
RTFDC1-202ENST00000357348 PEBP4Q96S96 227 aa12.9□□□□□ -0.34
RTFDC1-202ENST00000357348 FAM96AQ9H5X1 160 aa12.9□□□□□ -0.34
RTFDC1-202ENST00000357348 NUDT5Q9UKK9 219 aa12.9□□□□□ -0.34
RTFDC1-202ENST00000357348 MAGED2Q9UNF1 606 aaPredicted RBP12.9□□□□□ -0.34
RTFDC1-202ENST00000357348 XIRP2A4UGR9 3374 aa12.89□□□□□ -0.35
RTFDC1-202ENST00000357348 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.89□□□□□ -0.35
RTFDC1-202ENST00000357348 BCLAF3A2AJT9 711 aaKnown RBP12.89□□□□□ -0.35
RTFDC1-202ENST00000357348 SEC24AO95486 1093 aa12.89□□□□□ -0.35
RTFDC1-202ENST00000357348 DNAJB1P25685 340 aa12.89□□□□□ -0.35
RTFDC1-202ENST00000357348 BMPR1AP36894 532 aa12.89□□□□□ -0.35
RTFDC1-202ENST00000357348 SLC25A3Q00325 362 aa12.89□□□□□ -0.35
RTFDC1-202ENST00000357348 CCDC14Q49A88 953 aa12.89□□□□□ -0.35
RTFDC1-202ENST00000357348 RAB41Q5JT25 222 aa12.89□□□□□ -0.35
RTFDC1-202ENST00000357348 PLPP4Q5VZY2 271 aa12.89□□□□□ -0.35
RTFDC1-202ENST00000357348 SLC8B1Q6J4K2 584 aa12.89□□□□□ -0.35
RTFDC1-202ENST00000357348 UNC5AQ6ZN44 842 aa12.89□□□□□ -0.35
RTFDC1-202ENST00000357348 WDR75Q8IWA0 830 aaKnown RBP12.89□□□□□ -0.35
RTFDC1-202ENST00000357348 CCDC33Q8N5R6 958 aa12.89□□□□□ -0.35
RTFDC1-202ENST00000357348 ACMSDQ8TDX5 336 aa12.89□□□□□ -0.35
RTFDC1-202ENST00000357348 SIGLEC10Q96LC7 697 aa12.89□□□□□ -0.35
RTFDC1-202ENST00000357348 RILPQ96NA2 401 aa12.89□□□□□ -0.35
RTFDC1-202ENST00000357348 TCF25Q9BQ70 676 aa12.89□□□□□ -0.35
RTFDC1-202ENST00000357348 HERC2P3Q9BVR0 1158 aa12.89□□□□□ -0.35
RTFDC1-202ENST00000357348 SLC13A1Q9BZW2 595 aa12.89□□□□□ -0.35
RTFDC1-202ENST00000357348 CYP4F11Q9HBI6 524 aa12.89□□□□□ -0.35
RTFDC1-202ENST00000357348 ENTPD7Q9NQZ7 604 aa12.89□□□□□ -0.35
RTFDC1-202ENST00000357348 RAB6BQ9NRW1 208 aa12.89□□□□□ -0.35
RTFDC1-202ENST00000357348 ASNSD1Q9NWL6 643 aa12.89□□□□□ -0.35
RTFDC1-202ENST00000357348 DNAJC28Q9NX36 388 aa12.89□□□□□ -0.35
RTFDC1-202ENST00000357348 MARCOQ9UEW3 520 aaPredicted RBP12.89□□□□□ -0.35
RTFDC1-202ENST00000357348 PATJQ8NI35 1801 aa12.89□□□□□ -0.35
RTFDC1-202ENST00000357348 CCDC195A0A1B0GUA6 201 aa12.89□□□□□ -0.35
RTFDC1-202ENST00000357348 TEX28O15482 410 aa12.89□□□□□ -0.35
RTFDC1-202ENST00000357348 UGT1A9O60656 530 aa12.89□□□□□ -0.35
RTFDC1-202ENST00000357348 CXCL14O95715 111 aa12.89□□□□□ -0.35
RTFDC1-202ENST00000357348 KITP10721 976 aa12.89□□□□□ -0.35
RTFDC1-202ENST00000357348 FGF3P11487 239 aaPredicted RBP12.89□□□□□ -0.35
RTFDC1-202ENST00000357348 VAV1P15498 845 aa12.89□□□□□ -0.35
RTFDC1-202ENST00000357348 PRDX6P30041 224 aa12.89□□□□□ -0.35
RTFDC1-202ENST00000357348 SDC4P31431 198 aa12.89□□□□□ -0.35
RTFDC1-202ENST00000357348 ZNF143P52747 638 aaPredicted RBP12.89□□□□□ -0.35
RTFDC1-202ENST00000357348 COPAP53621 1224 aa12.89□□□□□ -0.35
RTFDC1-202ENST00000357348 DAOAP59103 153 aa12.89□□□□□ -0.35
RTFDC1-202ENST00000357348 BMPR2Q13873 1038 aa12.89□□□□□ -0.35
RTFDC1-202ENST00000357348 ANKRD20A4Q4UJ75 823 aa12.89□□□□□ -0.35
RTFDC1-202ENST00000357348 LRRC23Q53EV4 343 aaPredicted RBP12.89□□□□□ -0.35
RTFDC1-202ENST00000357348 C4orf22Q6V702 233 aa12.89□□□□□ -0.35
RTFDC1-202ENST00000357348 SLC26A9Q7LBE3 791 aa12.89□□□□□ -0.35
RTFDC1-202ENST00000357348 ZDHHC17Q8IUH5 632 aa12.89□□□□□ -0.35
RTFDC1-202ENST00000357348 NDUFAF2Q8N183 169 aa12.89□□□□□ -0.35
RTFDC1-202ENST00000357348 GSDMBQ8TAX9 411 aa12.89□□□□□ -0.35
RTFDC1-202ENST00000357348 SP7Q8TDD2 431 aaPredicted RBP12.89□□□□□ -0.35
RTFDC1-202ENST00000357348 POF1BQ8WVV4 589 aa12.89□□□□□ -0.35
RTFDC1-202ENST00000357348 PYDC1Q8WXC3 89 aa12.89□□□□□ -0.35
RTFDC1-202ENST00000357348 FUBP3Q96I24 572 aaKnown RBP eCLIP12.89□□□□□ -0.35
RTFDC1-202ENST00000357348 RNF157Q96PX1 679 aa12.89□□□□□ -0.35
RTFDC1-202ENST00000357348 UGT1A7Q9HAW7 530 aa12.89□□□□□ -0.35
RTFDC1-202ENST00000357348 UGT1A10Q9HAW8 530 aa12.89□□□□□ -0.35
RTFDC1-202ENST00000357348 UGT1A8Q9HAW9 530 aa12.89□□□□□ -0.35
RTFDC1-202ENST00000357348 GREB1Q4ZG55 1949 aa12.89□□□□□ -0.35
RTFDC1-202ENST00000357348 MEI4A8MW99 385 aa12.88□□□□□ -0.35
RTFDC1-202ENST00000357348 H3BNX3 289 aa12.88□□□□□ -0.35
RTFDC1-202ENST00000357348 TNFRSF10BO14763 440 aa12.88□□□□□ -0.35
RTFDC1-202ENST00000357348 DENRO43583 198 aaKnown RBP12.88□□□□□ -0.35
RTFDC1-202ENST00000357348 CREB3O43889 395 aa12.88□□□□□ -0.35
RTFDC1-202ENST00000357348 SMIM18P0DKX4 95 aa12.88□□□□□ -0.35
RTFDC1-202ENST00000357348 NCAM1P13591 858 aa12.88□□□□□ -0.35
RTFDC1-202ENST00000357348 CHN2P52757 468 aa12.88□□□□□ -0.35
RTFDC1-202ENST00000357348 AQP4P55087 323 aa12.88□□□□□ -0.35
RTFDC1-202ENST00000357348 IRX4P78413 519 aa12.88□□□□□ -0.35
RTFDC1-202ENST00000357348 MMRN1Q13201 1228 aa12.88□□□□□ -0.35
RTFDC1-202ENST00000357348 OGFRL1Q5TC84 451 aaPredicted RBP12.88□□□□□ -0.35
RTFDC1-202ENST00000357348 ZNF534Q76KX8 674 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms