RNA–Protein interactions for RNA: ENST00000357162.6

VPS13B-202, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13B, Length 14,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-202ENST00000357162 BHLHE22Q8NFJ8 381 aaPredicted RBP6.65□□□□□ -1.35
VPS13B-202ENST00000357162 GABBR1Q9UBS5 961 aa6.65□□□□□ -1.35
VPS13B-202ENST00000357162 ADAMTS13Q76LX8 1427 aa6.65□□□□□ -1.35
VPS13B-202ENST00000357162 USP17L10C9JJH3 530 aa6.65□□□□□ -1.35
VPS13B-202ENST00000357162 PLD1Q13393 1074 aa6.65□□□□□ -1.35
VPS13B-202ENST00000357162 CYP1B1Q16678 543 aa6.65□□□□□ -1.35
VPS13B-202ENST00000357162 THEMIS2Q5TEJ8 643 aa6.65□□□□□ -1.35
VPS13B-202ENST00000357162 TMPRSS11AQ6ZMR5 421 aa6.65□□□□□ -1.35
VPS13B-202ENST00000357162 GPR101Q96P66 508 aaPredicted RBP6.65□□□□□ -1.35
VPS13B-202ENST00000357162 CINPQ9BW66 212 aaPredicted RBP6.65□□□□□ -1.35
VPS13B-202ENST00000357162 MED28Q9H204 178 aa6.65□□□□□ -1.35
VPS13B-202ENST00000357162 IL1RAPQ9NPH3 570 aa6.65□□□□□ -1.35
VPS13B-202ENST00000357162 UPB1Q9UBR1 384 aa6.65□□□□□ -1.35
VPS13B-202ENST00000357162 CHORDC1Q9UHD1 332 aaPredicted RBP6.65□□□□□ -1.35
VPS13B-202ENST00000357162 PCDHGB3Q9Y5G1 929 aa6.65□□□□□ -1.35
VPS13B-202ENST00000357162 DFFAO00273 331 aa6.65□□□□□ -1.35
VPS13B-202ENST00000357162 FAM20BO75063 409 aa6.65□□□□□ -1.35
VPS13B-202ENST00000357162 GH2P01242 217 aa6.65□□□□□ -1.35
VPS13B-202ENST00000357162 AXLP30530 894 aa6.65□□□□□ -1.35
VPS13B-202ENST00000357162 PBX1P40424 430 aa6.65□□□□□ -1.35
VPS13B-202ENST00000357162 KCTD21Q4G0X4 260 aa6.65□□□□□ -1.35
VPS13B-202ENST00000357162 ATF7IP2Q5U623 682 aa6.65□□□□□ -1.35
VPS13B-202ENST00000357162 CCDC81Q6ZN84 652 aa6.65□□□□□ -1.35
VPS13B-202ENST00000357162 USP43Q70EL4 1123 aa6.65□□□□□ -1.35
VPS13B-202ENST00000357162 CDK20Q8IZL9 346 aa6.65□□□□□ -1.35
VPS13B-202ENST00000357162 MTG1Q9BT17 334 aaPredicted RBP6.65□□□□□ -1.35
VPS13B-202ENST00000357162 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.64□□□□□ -1.35
VPS13B-202ENST00000357162 FOXN1O15353 648 aa6.64□□□□□ -1.35
VPS13B-202ENST00000357162 PAPSS1O43252 624 aaPredicted RBP6.64□□□□□ -1.35
VPS13B-202ENST00000357162 OTCP00480 354 aa6.64□□□□□ -1.35
VPS13B-202ENST00000357162 ASLP04424 464 aa6.64□□□□□ -1.35
VPS13B-202ENST00000357162 CNPP09543 421 aaKnown RBP6.64□□□□□ -1.35
VPS13B-202ENST00000357162 TFE3P19532 575 aaPredicted RBP6.64□□□□□ -1.35
VPS13B-202ENST00000357162 PSME3P61289 254 aa6.64□□□□□ -1.35
VPS13B-202ENST00000357162 ERAP2Q6P179 960 aa6.64□□□□□ -1.35
VPS13B-202ENST00000357162 ZSCAN32Q9NX65 697 aa6.64□□□□□ -1.35
VPS13B-202ENST00000357162 SUCOQ9UBS9 1254 aaKnown RBP6.64□□□□□ -1.35
VPS13B-202ENST00000357162 AP4E1Q9UPM8 1137 aa6.64□□□□□ -1.35
VPS13B-202ENST00000357162 CCDC168Q8NDH2 2452 aa6.64□□□□□ -1.35
VPS13B-202ENST00000357162 TDP2O95551 362 aa6.64□□□□□ -1.35
VPS13B-202ENST00000357162 CA8P35219 290 aa6.64□□□□□ -1.35
VPS13B-202ENST00000357162 FKBP1CQ5VVH2 108 aa6.64□□□□□ -1.35
VPS13B-202ENST00000357162 BORAQ6PGQ7 559 aa6.64□□□□□ -1.35
VPS13B-202ENST00000357162 MCOLN3Q8TDD5 553 aa6.64□□□□□ -1.35
VPS13B-202ENST00000357162 FAM217BQ9NTX9 383 aaPredicted RBP6.64□□□□□ -1.35
VPS13B-202ENST00000357162 KLHL11Q9NVR0 708 aa6.64□□□□□ -1.35
VPS13B-202ENST00000357162 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.64□□□□□ -1.35
VPS13B-202ENST00000357162 DDX52Q9Y2R4 599 aaKnown RBP eCLIP6.64□□□□□ -1.35
VPS13B-202ENST00000357162 GNG14A0A1W2PPG7 69 aa6.64□□□□□ -1.35
VPS13B-202ENST00000357162 FSCN2O14926 492 aa6.64□□□□□ -1.35
VPS13B-202ENST00000357162 TADA2AO75478 443 aa6.64□□□□□ -1.35
VPS13B-202ENST00000357162 ICAM1P05362 532 aa6.64□□□□□ -1.35
VPS13B-202ENST00000357162 LYNP07948 512 aa6.64□□□□□ -1.35
VPS13B-202ENST00000357162 GRK4P32298 578 aa6.64□□□□□ -1.35
VPS13B-202ENST00000357162 RORAP35398 523 aa6.64□□□□□ -1.35
VPS13B-202ENST00000357162 GPALPP1Q8IXQ4 340 aa6.64□□□□□ -1.35
VPS13B-202ENST00000357162 TAS2R7Q9NYW3 318 aa6.64□□□□□ -1.35
VPS13B-202ENST00000357162 MED11Q9P086 117 aa6.64□□□□□ -1.35
VPS13B-202ENST00000357162 MINPP1Q9UNW1 487 aa6.64□□□□□ -1.35
VPS13B-202ENST00000357162 PCDHGB6Q9Y5F9 930 aa6.64□□□□□ -1.35
VPS13B-202ENST00000357162 DUOX1Q9NRD9 1551 aa6.64□□□□□ -1.35
VPS13B-202ENST00000357162 HEATR5BQ9P2D3 2071 aa6.64□□□□□ -1.35
VPS13B-202ENST00000357162 NEMP1O14524 444 aa6.64□□□□□ -1.35
VPS13B-202ENST00000357162 TMCC2O75069 709 aa6.64□□□□□ -1.35
VPS13B-202ENST00000357162 CLPXO76031 633 aa6.64□□□□□ -1.35
VPS13B-202ENST00000357162 IPO13O94829 963 aaKnown RBP6.64□□□□□ -1.35
VPS13B-202ENST00000357162 RPL21P46778 160 aaKnown RBP6.64□□□□□ -1.35
VPS13B-202ENST00000357162 SP8Q8IXZ3 490 aa6.64□□□□□ -1.35
VPS13B-202ENST00000357162 KIAA0895Q8NCT3 520 aa6.64□□□□□ -1.35
VPS13B-202ENST00000357162 MASTLQ96GX5 879 aa6.64□□□□□ -1.35
VPS13B-202ENST00000357162 SERPINB11Q96P15 392 aa6.64□□□□□ -1.35
VPS13B-202ENST00000357162 EPB41L1Q9H4G0 881 aa6.64□□□□□ -1.35
VPS13B-202ENST00000357162 COL3A1P02461 1466 aaPredicted RBP6.64□□□□□ -1.35
VPS13B-202ENST00000357162 OR14I1A6ND48 311 aa6.64□□□□□ -1.35
VPS13B-202ENST00000357162 NBPF26B4DH59 902 aa6.64□□□□□ -1.35
VPS13B-202ENST00000357162 ADRA1DP25100 572 aa6.64□□□□□ -1.35
VPS13B-202ENST00000357162 SULT1E1P49888 294 aa6.64□□□□□ -1.35
VPS13B-202ENST00000357162 ATP1A4Q13733 1029 aa6.64□□□□□ -1.35
VPS13B-202ENST00000357162 GIT2Q14161 759 aa6.64□□□□□ -1.35
VPS13B-202ENST00000357162 TEAD4Q15561 434 aa6.64□□□□□ -1.35
VPS13B-202ENST00000357162 CRTC3Q6UUV7 619 aa6.64□□□□□ -1.35
VPS13B-202ENST00000357162 PI16Q6UXB8 463 aa6.64□□□□□ -1.35
VPS13B-202ENST00000357162 SNX32Q86XE0 403 aa6.64□□□□□ -1.35
VPS13B-202ENST00000357162 ZNF276Q8N554 614 aa6.64□□□□□ -1.35
VPS13B-202ENST00000357162 ATP6V0D2Q8N8Y2 350 aa6.64□□□□□ -1.35
VPS13B-202ENST00000357162 DNERQ8NFT8 737 aa6.64□□□□□ -1.35
VPS13B-202ENST00000357162 PLEKHO2Q8TD55 490 aa6.64□□□□□ -1.35
VPS13B-202ENST00000357162 NARS2Q96I59 477 aaKnown RBP6.64□□□□□ -1.35
VPS13B-202ENST00000357162 ZDHHC15Q96MV8 337 aa6.64□□□□□ -1.35
VPS13B-202ENST00000357162 A0A0X1KG70 313 aa6.64□□□□□ -1.35
VPS13B-202ENST00000357162 H0YAE9 185 aa6.64□□□□□ -1.35
VPS13B-202ENST00000357162 LYPLA2O95372 231 aa6.64□□□□□ -1.35
VPS13B-202ENST00000357162 PNLIPRP1P54315 467 aa6.64□□□□□ -1.35
VPS13B-202ENST00000357162 ZZZ3Q8IYH5 903 aa6.64□□□□□ -1.35
VPS13B-202ENST00000357162 OR2W6PQ8NHA6 318 aa6.64□□□□□ -1.35
VPS13B-202ENST00000357162 EPS8L1Q8TE68 723 aa6.64□□□□□ -1.35
VPS13B-202ENST00000357162 GIPC3Q8TF64 312 aa6.64□□□□□ -1.35
VPS13B-202ENST00000357162 POF1BQ8WVV4 589 aa6.64□□□□□ -1.35
VPS13B-202ENST00000357162 SAE1Q9UBE0 346 aaPredicted RBP6.64□□□□□ -1.35
VPS13B-202ENST00000357162 CKLFQ9UBR5 152 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms