RNA–Protein interactions for RNA: ENST00000356017.8

TRIM13-201, Transcript of tripartite motif containing 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRIM13, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-201ENST00000356017 ACTRT1Q8TDG2 376 aa15.8■□□□□ 0.12
TRIM13-201ENST00000356017 OR8D1Q8WZ84 308 aa15.8■□□□□ 0.12
TRIM13-201ENST00000356017 GDAP1L1Q96MZ0 367 aa15.8■□□□□ 0.12
TRIM13-201ENST00000356017 CD248Q9HCU0 757 aa15.8■□□□□ 0.12
TRIM13-201ENST00000356017 TCRBV7S2A1N4TA0A589 114 aa15.79■□□□□ 0.12
TRIM13-201ENST00000356017 TCRBV21S2A2A0A5A6 115 aa15.79■□□□□ 0.12
TRIM13-201ENST00000356017 PGRMC1O00264 195 aaKnown RBP15.79■□□□□ 0.12
TRIM13-201ENST00000356017 BNIP3LO60238 219 aa15.79■□□□□ 0.12
TRIM13-201ENST00000356017 APBB3O95704 486 aa15.79■□□□□ 0.12
TRIM13-201ENST00000356017 IGSF6O95976 241 aa15.79■□□□□ 0.12
TRIM13-201ENST00000356017 HOXA6P31267 233 aa15.79■□□□□ 0.12
TRIM13-201ENST00000356017 IFI35P80217 286 aaPredicted RBP15.79■□□□□ 0.12
TRIM13-201ENST00000356017 SATB1Q01826 763 aa15.79■□□□□ 0.12
TRIM13-201ENST00000356017 RAD51Q06609 339 aa15.79■□□□□ 0.12
TRIM13-201ENST00000356017 HEATR6Q6AI08 1181 aaKnown RBP15.79■□□□□ 0.12
TRIM13-201ENST00000356017 KIAA1211LQ6NV74 962 aa15.79■□□□□ 0.12
TRIM13-201ENST00000356017 TSEN2Q8NCE0 465 aaKnown RBP15.79■□□□□ 0.12
TRIM13-201ENST00000356017 COG1Q8WTW3 980 aa15.79■□□□□ 0.12
TRIM13-201ENST00000356017 QKIQ96PU8 341 aaKnown RBP eCLIP15.79■□□□□ 0.12
TRIM13-201ENST00000356017 VAT1Q99536 393 aa15.79■□□□□ 0.12
TRIM13-201ENST00000356017 TM6SF2Q9BZW4 377 aa15.79■□□□□ 0.12
TRIM13-201ENST00000356017 TNKS2Q9H2K2 1166 aa15.79■□□□□ 0.12
TRIM13-201ENST00000356017 PRMT8Q9NR22 394 aaPredicted RBP15.79■□□□□ 0.12
TRIM13-201ENST00000356017 C2orf42Q9NWW7 574 aa15.79■□□□□ 0.12
TRIM13-201ENST00000356017 NUP205Q92621 2012 aa15.79■□□□□ 0.12
TRIM13-201ENST00000356017 KCNK1O00180 336 aa15.79■□□□□ 0.12
TRIM13-201ENST00000356017 POP4O95707 220 aaKnown RBP15.79■□□□□ 0.12
TRIM13-201ENST00000356017 VAV1P15498 845 aa15.79■□□□□ 0.12
TRIM13-201ENST00000356017 COL9A1P20849 921 aa15.79■□□□□ 0.12
TRIM13-201ENST00000356017 MAPK8P45983 427 aa15.79■□□□□ 0.12
TRIM13-201ENST00000356017 CSNK1DP48730 415 aa15.79■□□□□ 0.12
TRIM13-201ENST00000356017 ZBTB16Q05516 673 aa15.79■□□□□ 0.12
TRIM13-201ENST00000356017 GRM3Q14832 879 aa15.79■□□□□ 0.12
TRIM13-201ENST00000356017 CCNG2Q16589 344 aa15.79■□□□□ 0.12
TRIM13-201ENST00000356017 DARS2Q6PI48 645 aaKnown RBP15.79■□□□□ 0.12
TRIM13-201ENST00000356017 DPY19L3Q6ZPD9 716 aa15.79■□□□□ 0.12
TRIM13-201ENST00000356017 ADAT2Q7Z6V5 191 aaKnown RBP15.79■□□□□ 0.12
TRIM13-201ENST00000356017 TMPRSS6Q8IU80 811 aa15.79■□□□□ 0.12
TRIM13-201ENST00000356017 HTR3CQ8WXA8 447 aa15.79■□□□□ 0.12
TRIM13-201ENST00000356017 LRIG1Q96JA1 1093 aa15.79■□□□□ 0.12
TRIM13-201ENST00000356017 LRFN3Q9BTN0 628 aa15.79■□□□□ 0.12
TRIM13-201ENST00000356017 RSPH9Q9H1X1 276 aaPredicted RBP15.79■□□□□ 0.12
TRIM13-201ENST00000356017 MTG2Q9H4K7 406 aa15.79■□□□□ 0.12
TRIM13-201ENST00000356017 RBM22Q9NW64 420 aaKnown RBP eCLIP15.79■□□□□ 0.12
TRIM13-201ENST00000356017 LHX3Q9UBR4 397 aa15.79■□□□□ 0.12
TRIM13-201ENST00000356017 RNF14Q9UBS8 474 aa15.79■□□□□ 0.12
TRIM13-201ENST00000356017 EBF1Q9UH73 591 aa15.79■□□□□ 0.12
TRIM13-201ENST00000356017 FBXO4Q9UKT5 387 aa15.79■□□□□ 0.12
TRIM13-201ENST00000356017 MUC22E2RYF6 1773 aaPredicted RBP15.79■□□□□ 0.12
TRIM13-201ENST00000356017 BCLAF3A2AJT9 711 aaKnown RBP15.78■□□□□ 0.12
TRIM13-201ENST00000356017 STK10O94804 968 aaKnown RBP15.78■□□□□ 0.12
TRIM13-201ENST00000356017 JCHAINP01591 159 aa15.78■□□□□ 0.12
TRIM13-201ENST00000356017 PRNPP04156 253 aa15.78■□□□□ 0.12
TRIM13-201ENST00000356017 C7P10643 843 aa15.78■□□□□ 0.12
TRIM13-201ENST00000356017 CES1P23141 567 aa15.78■□□□□ 0.12
TRIM13-201ENST00000356017 CCNHP51946 323 aaPredicted RBP15.78■□□□□ 0.12
TRIM13-201ENST00000356017 MYLK3Q32MK0 819 aa15.78■□□□□ 0.12
TRIM13-201ENST00000356017 RALGPS1Q5JS13 557 aa15.78■□□□□ 0.12
TRIM13-201ENST00000356017 FAM46CQ5VWP2 391 aa15.78■□□□□ 0.12
TRIM13-201ENST00000356017 ZNF776Q68DI1 518 aaPredicted RBP15.78■□□□□ 0.12
TRIM13-201ENST00000356017 STK40Q8N2I9 435 aa15.78■□□□□ 0.12
TRIM13-201ENST00000356017 RYBPQ8N488 228 aaPredicted RBP15.78■□□□□ 0.12
TRIM13-201ENST00000356017 SLC35B2Q8TB61 432 aa15.78■□□□□ 0.12
TRIM13-201ENST00000356017 LRRN4Q8WUT4 740 aa15.78■□□□□ 0.12
TRIM13-201ENST00000356017 PRCCQ92733 491 aaPredicted RBP15.78■□□□□ 0.12
TRIM13-201ENST00000356017 MS4A14Q96JA4 679 aa15.78■□□□□ 0.12
TRIM13-201ENST00000356017 HHIPQ96QV1 700 aa15.78■□□□□ 0.12
TRIM13-201ENST00000356017 FAM129BQ96TA1 746 aa15.78■□□□□ 0.12
TRIM13-201ENST00000356017 IL12RB2Q99665 862 aa15.78■□□□□ 0.12
TRIM13-201ENST00000356017 MGME1Q9BQP7 344 aa15.78■□□□□ 0.12
TRIM13-201ENST00000356017 HEPHQ9BQS7 1158 aa15.78■□□□□ 0.12
TRIM13-201ENST00000356017 POLR1EQ9GZS1 481 aaKnown RBP15.78■□□□□ 0.12
TRIM13-201ENST00000356017 MKRN2Q9H000 416 aaKnown RBP15.78■□□□□ 0.12
TRIM13-201ENST00000356017 POLR3BQ9NW08 1133 aaPredicted RBP15.78■□□□□ 0.12
TRIM13-201ENST00000356017 SEPT10Q9P0V9 454 aa15.78■□□□□ 0.12
TRIM13-201ENST00000356017 BCCIPQ9P287 314 aaKnown RBP eCLIP15.78■□□□□ 0.12
TRIM13-201ENST00000356017 SCML1Q9UN30 329 aa15.78■□□□□ 0.12
TRIM13-201ENST00000356017 NYNRINQ9P2P1 1898 aaKnown RBP15.77■□□□□ 0.12
TRIM13-201ENST00000356017 CCDC163A0A0D9SF12 145 aa15.77■□□□□ 0.12
TRIM13-201ENST00000356017 CFAP69A5D8W1 941 aa15.77■□□□□ 0.12
TRIM13-201ENST00000356017 K7ESF4 209 aa15.77■□□□□ 0.12
TRIM13-201ENST00000356017 STIP1P31948 543 aaKnown RBP15.77■□□□□ 0.12
TRIM13-201ENST00000356017 CHRNA3P32297 505 aa15.77■□□□□ 0.12
TRIM13-201ENST00000356017 COPAP53621 1224 aa15.77■□□□□ 0.12
TRIM13-201ENST00000356017 NRLP54845 237 aa15.77■□□□□ 0.12
TRIM13-201ENST00000356017 SFSWAPQ12872 951 aaKnown RBP15.77■□□□□ 0.12
TRIM13-201ENST00000356017 BYSLQ13895 437 aaKnown RBP15.77■□□□□ 0.12
TRIM13-201ENST00000356017 TEX44Q53QW1 395 aa15.77■□□□□ 0.12
TRIM13-201ENST00000356017 ANO7Q6IWH7 933 aa15.77■□□□□ 0.12
TRIM13-201ENST00000356017 DRICH1Q6PGQ1 229 aaPredicted RBP15.77■□□□□ 0.12
TRIM13-201ENST00000356017 RASSF3Q86WH2 238 aa15.77■□□□□ 0.12
TRIM13-201ENST00000356017 PGBD3Q8N328 593 aa15.77■□□□□ 0.12
TRIM13-201ENST00000356017 TMIEQ8NEW7 156 aa15.77■□□□□ 0.12
TRIM13-201ENST00000356017 HMGB4Q8WW32 186 aa15.77■□□□□ 0.12
TRIM13-201ENST00000356017 SIPA1Q96FS4 1042 aa15.77■□□□□ 0.12
TRIM13-201ENST00000356017 MRGPRX1Q96LB2 322 aa15.77■□□□□ 0.12
TRIM13-201ENST00000356017 PRRX2Q99811 253 aa15.77■□□□□ 0.12
TRIM13-201ENST00000356017 FAM118BQ9BPY3 351 aa15.77■□□□□ 0.12
TRIM13-201ENST00000356017 FAM126AQ9BYI3 521 aaPredicted RBP15.77■□□□□ 0.12
TRIM13-201ENST00000356017 NT5MQ9NPB1 228 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms