RNA–Protein interactions for RNA: ENST00000355841.6

PDLIM7-202, Transcript of PDZ and LIM domain 7, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PDLIM7, Length 1,689 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-202ENST00000355841 CAMKK1Q8N5S9 505 aa18.17■□□□□ 0.5
PDLIM7-202ENST00000355841 UBE2Q2Q8WVN8 375 aa18.17■□□□□ 0.5
PDLIM7-202ENST00000355841 TSGA13Q96PP4 275 aa18.17■□□□□ 0.5
PDLIM7-202ENST00000355841 CINPQ9BW66 212 aaPredicted RBP18.17■□□□□ 0.5
PDLIM7-202ENST00000355841 SARDHQ9UL12 918 aa18.17■□□□□ 0.5
PDLIM7-202ENST00000355841 INVSQ9Y283 1065 aa18.17■□□□□ 0.5
PDLIM7-202ENST00000355841 ZKSCAN5Q9Y2L8 839 aa18.17■□□□□ 0.5
PDLIM7-202ENST00000355841 CKAP5Q14008 2032 aa18.17■□□□□ 0.5
PDLIM7-202ENST00000355841 USP34Q70CQ2 3546 aa18.17■□□□□ 0.5
PDLIM7-202ENST00000355841 CXorf51AA0A1B0GTR3 108 aa18.16■□□□□ 0.5
PDLIM7-202ENST00000355841 H0Y858 1186 aa18.16■□□□□ 0.5
PDLIM7-202ENST00000355841 PPP1R12AO14974 1030 aaPredicted RBP18.16■□□□□ 0.5
PDLIM7-202ENST00000355841 MATN3O15232 486 aa18.16■□□□□ 0.5
PDLIM7-202ENST00000355841 ALDH1A2O94788 518 aa18.16■□□□□ 0.5
PDLIM7-202ENST00000355841 IL1BP01584 269 aa18.16■□□□□ 0.5
PDLIM7-202ENST00000355841 SP9P0CG40 484 aa18.16■□□□□ 0.5
PDLIM7-202ENST00000355841 RECQLP46063 649 aaPredicted RBP18.16■□□□□ 0.5
PDLIM7-202ENST00000355841 CCNHP51946 323 aaPredicted RBP18.16■□□□□ 0.5
PDLIM7-202ENST00000355841 MAXP61244 160 aa18.16■□□□□ 0.5
PDLIM7-202ENST00000355841 RPS14P62263 151 aaKnown RBP18.16■□□□□ 0.5
PDLIM7-202ENST00000355841 ELAVL3Q14576 367 aaKnown RBP18.16■□□□□ 0.5
PDLIM7-202ENST00000355841 MARC1Q5VT66 337 aa18.16■□□□□ 0.5
PDLIM7-202ENST00000355841 OR2AP1Q8NGE2 309 aa18.16■□□□□ 0.5
PDLIM7-202ENST00000355841 COG1Q8WTW3 980 aa18.16■□□□□ 0.5
PDLIM7-202ENST00000355841 CASKIN2Q8WXE0 1202 aa18.16■□□□□ 0.5
PDLIM7-202ENST00000355841 RLN3Q8WXF3 142 aa18.16■□□□□ 0.5
PDLIM7-202ENST00000355841 ISG20Q96AZ6 181 aaKnown RBP18.16■□□□□ 0.5
PDLIM7-202ENST00000355841 MS4A14Q96JA4 679 aa18.16■□□□□ 0.5
PDLIM7-202ENST00000355841 ZNF599Q96NL3 588 aa18.16■□□□□ 0.5
PDLIM7-202ENST00000355841 RSPH9Q9H1X1 276 aaPredicted RBP18.16■□□□□ 0.5
PDLIM7-202ENST00000355841 SEPT10Q9P0V9 454 aa18.16■□□□□ 0.5
PDLIM7-202ENST00000355841 EBF1Q9UH73 591 aa18.16■□□□□ 0.5
PDLIM7-202ENST00000355841 EVLQ9UI08 416 aaPredicted RBP18.16■□□□□ 0.5
PDLIM7-202ENST00000355841 FBXO4Q9UKT5 387 aa18.16■□□□□ 0.5
PDLIM7-202ENST00000355841 SHROOM3Q8TF72 1996 aa18.16■□□□□ 0.5
PDLIM7-202ENST00000355841 KRIT1O00522 736 aa18.15■□□□□ 0.5
PDLIM7-202ENST00000355841 MCF2LO15068 1137 aa18.15■□□□□ 0.5
PDLIM7-202ENST00000355841 INSIG1O15503 277 aa18.15■□□□□ 0.5
PDLIM7-202ENST00000355841 ZBTB24O43167 697 aaPredicted RBP18.15■□□□□ 0.5
PDLIM7-202ENST00000355841 CCNB1P14635 433 aa18.15■□□□□ 0.5
PDLIM7-202ENST00000355841 MMP13P45452 471 aa18.15■□□□□ 0.5
PDLIM7-202ENST00000355841 PSMD8P48556 350 aa18.15■□□□□ 0.5
PDLIM7-202ENST00000355841 ZNF235Q14590 738 aa18.15■□□□□ 0.5
PDLIM7-202ENST00000355841 NOMO1Q15155 1222 aa18.15■□□□□ 0.5
PDLIM7-202ENST00000355841 TIGD7Q6NT04 549 aaPredicted RBP18.15■□□□□ 0.5
PDLIM7-202ENST00000355841 BZW1Q7L1Q6 419 aaKnown RBP18.15■□□□□ 0.5
PDLIM7-202ENST00000355841 RASSF3Q86WH2 238 aa18.15■□□□□ 0.5
PDLIM7-202ENST00000355841 FRMD1Q8N878 549 aa18.15■□□□□ 0.5
PDLIM7-202ENST00000355841 PRSS33Q8NF86 280 aa18.15■□□□□ 0.5
PDLIM7-202ENST00000355841 NSMCE1Q8WV22 266 aa18.15■□□□□ 0.5
PDLIM7-202ENST00000355841 TFB1MQ8WVM0 346 aaKnown RBP18.15■□□□□ 0.5
PDLIM7-202ENST00000355841 ATG4AQ8WYN0 398 aa18.15■□□□□ 0.5
PDLIM7-202ENST00000355841 OR8D1Q8WZ84 308 aa18.15■□□□□ 0.5
PDLIM7-202ENST00000355841 SIPA1Q96FS4 1042 aa18.15■□□□□ 0.5
PDLIM7-202ENST00000355841 ZDHHC6Q9H6R6 413 aa18.15■□□□□ 0.5
PDLIM7-202ENST00000355841 NT5MQ9NPB1 228 aa18.15■□□□□ 0.5
PDLIM7-202ENST00000355841 SMARCAL1Q9NZC9 954 aa18.15■□□□□ 0.5
PDLIM7-202ENST00000355841 SEPT3Q9UH03 358 aa18.15■□□□□ 0.5
PDLIM7-202ENST00000355841 TTLL3Q9Y4R7 772 aa18.15■□□□□ 0.5
PDLIM7-202ENST00000355841 DMDP11532 3685 aa18.15■□□□□ 0.5
PDLIM7-202ENST00000355841 MYO15AQ9UKN7 3530 aa18.15■□□□□ 0.5
PDLIM7-202ENST00000355841 H7C0C1 242 aa18.15■□□□□ 0.5
PDLIM7-202ENST00000355841 PLK4O00444 970 aa18.15■□□□□ 0.5
PDLIM7-202ENST00000355841 AXIN1O15169 862 aa18.15■□□□□ 0.5
PDLIM7-202ENST00000355841 ZNF185O15231 689 aa18.15■□□□□ 0.5
PDLIM7-202ENST00000355841 JCHAINP01591 159 aa18.15■□□□□ 0.5
PDLIM7-202ENST00000355841 FGGP02679 453 aa18.15■□□□□ 0.5
PDLIM7-202ENST00000355841 CHRNA3P32297 505 aa18.15■□□□□ 0.5
PDLIM7-202ENST00000355841 ATP5OP48047 213 aa18.15■□□□□ 0.5
PDLIM7-202ENST00000355841 EIF3EP60228 445 aaKnown RBP18.15■□□□□ 0.5
PDLIM7-202ENST00000355841 SNRPD1P62314 119 aaKnown RBP18.15■□□□□ 0.5
PDLIM7-202ENST00000355841 ZBTB17Q13105 803 aa18.15■□□□□ 0.5
PDLIM7-202ENST00000355841 SRSF5Q13243 272 aaKnown RBP18.15■□□□□ 0.5
PDLIM7-202ENST00000355841 RFTN1Q14699 578 aaPredicted RBP18.15■□□□□ 0.5
PDLIM7-202ENST00000355841 PRKD1Q15139 912 aaPredicted RBP18.15■□□□□ 0.5
PDLIM7-202ENST00000355841 ARSIQ5FYB1 569 aa18.15■□□□□ 0.5
PDLIM7-202ENST00000355841 METTL3Q86U44 580 aaKnown RBP18.15■□□□□ 0.5
PDLIM7-202ENST00000355841 MAML1Q92585 1016 aa18.15■□□□□ 0.5
PDLIM7-202ENST00000355841 PRCCQ92733 491 aaPredicted RBP18.15■□□□□ 0.5
PDLIM7-202ENST00000355841 GDAP1L1Q96MZ0 367 aa18.15■□□□□ 0.5
PDLIM7-202ENST00000355841 PSKH2Q96QS6 385 aa18.15■□□□□ 0.5
PDLIM7-202ENST00000355841 OSBPL9Q96SU4 736 aa18.15■□□□□ 0.5
PDLIM7-202ENST00000355841 RBM22Q9NW64 420 aaKnown RBP eCLIP18.15■□□□□ 0.51e-6■□□□□ 9.2
PDLIM7-202ENST00000355841 PPM1HQ9ULR3 514 aa18.15■□□□□ 0.5
PDLIM7-202ENST00000355841 MID1O15344 667 aa18.14■□□□□ 0.49
PDLIM7-202ENST00000355841 RNASEH1O60930 286 aaKnown RBP18.14■□□□□ 0.49
PDLIM7-202ENST00000355841 LEFTY1O75610 366 aa18.14■□□□□ 0.49
PDLIM7-202ENST00000355841 GSRP00390 522 aa18.14■□□□□ 0.49
PDLIM7-202ENST00000355841 RENBPP51606 427 aa18.14■□□□□ 0.49
PDLIM7-202ENST00000355841 NRLP54845 237 aa18.14■□□□□ 0.49
PDLIM7-202ENST00000355841 TCF15Q12870 199 aa18.14■□□□□ 0.49
PDLIM7-202ENST00000355841 HNRNPDQ14103 355 aaKnown RBP18.14■□□□□ 0.49
PDLIM7-202ENST00000355841 CST6Q15828 149 aa18.14■□□□□ 0.49
PDLIM7-202ENST00000355841 MYLK3Q32MK0 819 aa18.14■□□□□ 0.49
PDLIM7-202ENST00000355841 ZNF776Q68DI1 518 aaPredicted RBP18.14■□□□□ 0.49
PDLIM7-202ENST00000355841 FAM160A2Q8N612 972 aaPredicted RBP18.14■□□□□ 0.49
PDLIM7-202ENST00000355841 PIP4K2CQ8TBX8 421 aa18.14■□□□□ 0.49
PDLIM7-202ENST00000355841 VOPP1Q96AW1 172 aa18.14■□□□□ 0.49
PDLIM7-202ENST00000355841 CCDC114Q96M63 670 aa18.14■□□□□ 0.49
PDLIM7-202ENST00000355841 IL36AQ9UHA7 158 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms