RNA–Protein interactions for RNA: ENST00000355560.4

CLK2-201, Transcript of CDC like kinase 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CLK2, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK2-201ENST00000355560 OR7D4Q8NG98 312 aa26.06■■□□□ 1.76
CLK2-201ENST00000355560 PDFQ9HBH1 243 aa26.06■■□□□ 1.76
CLK2-201ENST00000355560 C20orf96Q9NUD7 363 aaPredicted RBP26.06■■□□□ 1.76
CLK2-201ENST00000355560 GGA2Q9UJY4 613 aa26.06■■□□□ 1.76
CLK2-201ENST00000355560 ITGA2BP08514 1039 aa26.06■■□□□ 1.76
CLK2-201ENST00000355560 HOXD9P28356 352 aaPredicted RBP26.06■■□□□ 1.76
CLK2-201ENST00000355560 TMEM240Q5SV17 173 aa26.06■■□□□ 1.76
CLK2-201ENST00000355560 IL31Q6EBC2 164 aa26.06■■□□□ 1.76
CLK2-201ENST00000355560 TIFABQ6ZNK6 161 aa26.06■■□□□ 1.76
CLK2-201ENST00000355560 RGS9BPQ6ZS82 235 aa26.06■■□□□ 1.76
CLK2-201ENST00000355560 CCDC117Q8IWD4 279 aaPredicted RBP26.06■■□□□ 1.76
CLK2-201ENST00000355560 ARL14EPQ8N8R7 260 aaPredicted RBP26.06■■□□□ 1.76
CLK2-201ENST00000355560 CCDC197Q8NCU1 140 aa26.06■■□□□ 1.76
CLK2-201ENST00000355560 LRRC8CQ8TDW0 803 aa26.06■■□□□ 1.76
CLK2-201ENST00000355560 AGAP2Q99490 1192 aa26.06■■□□□ 1.76
CLK2-201ENST00000355560 SLC13A1Q9BZW2 595 aa26.06■■□□□ 1.76
CLK2-201ENST00000355560 ASB3Q9Y575 518 aa26.06■■□□□ 1.76
CLK2-201ENST00000355560 A0A1B0GVM2 712 aa26.05■■□□□ 1.76
CLK2-201ENST00000355560 TTC24A2A3L6 582 aaPredicted RBP26.05■■□□□ 1.76
CLK2-201ENST00000355560 TCAF2A6NFQ2 919 aa26.05■■□□□ 1.76
CLK2-201ENST00000355560 TSPAN3O60637 253 aa26.05■■□□□ 1.76
CLK2-201ENST00000355560 LRG1P02750 347 aa26.05■■□□□ 1.76
CLK2-201ENST00000355560 ADH1AP07327 375 aa26.05■■□□□ 1.76
CLK2-201ENST00000355560 MMP2P08253 660 aa26.05■■□□□ 1.76
CLK2-201ENST00000355560 HSPA1AP0DMV8 641 aaKnown RBP26.05■■□□□ 1.76
CLK2-201ENST00000355560 HSPA1BP0DMV9 641 aaKnown RBP26.05■■□□□ 1.76
CLK2-201ENST00000355560 ETV4P43268 484 aa26.05■■□□□ 1.76
CLK2-201ENST00000355560 ZNF235Q14590 738 aa26.05■■□□□ 1.76
CLK2-201ENST00000355560 PKN3Q6P5Z2 889 aa26.05■■□□□ 1.76
CLK2-201ENST00000355560 POTEHQ6S545 545 aa26.05■■□□□ 1.76
CLK2-201ENST00000355560 FAM47EQ6ZV65 393 aa26.05■■□□□ 1.76
CLK2-201ENST00000355560 PPHLN1Q8NEY8 458 aaKnown RBP26.05■■□□□ 1.76
CLK2-201ENST00000355560 WDR91A4D1P6 747 aa26.05■■□□□ 1.76
CLK2-201ENST00000355560 SCAMP3O14828 347 aaKnown RBP26.05■■□□□ 1.76
CLK2-201ENST00000355560 SNX3O60493 162 aa26.05■■□□□ 1.76
CLK2-201ENST00000355560 ALADP13716 330 aa26.05■■□□□ 1.76
CLK2-201ENST00000355560 GABRR2P28476 465 aa26.05■■□□□ 1.76
CLK2-201ENST00000355560 TEDDM1Q5T9Z0 273 aa26.05■■□□□ 1.76
CLK2-201ENST00000355560 CHST9Q7L1S5 443 aa26.05■■□□□ 1.76
CLK2-201ENST00000355560 HERC6Q8IVU3 1022 aa26.05■■□□□ 1.76
CLK2-201ENST00000355560 NDUFAF2Q8N183 169 aa26.05■■□□□ 1.76
CLK2-201ENST00000355560 DDX50Q9BQ39 737 aaKnown RBP26.05■■□□□ 1.76
CLK2-201ENST00000355560 TCF25Q9BQ70 676 aa26.05■■□□□ 1.76
CLK2-201ENST00000355560 POLR1EQ9GZS1 481 aaKnown RBP26.05■■□□□ 1.76
CLK2-201ENST00000355560 MKS1Q9NXB0 559 aa26.05■■□□□ 1.76
CLK2-201ENST00000355560 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP26.04■■□□□ 1.76
CLK2-201ENST00000355560 LCHNA4D1U4 455 aa26.04■■□□□ 1.76
CLK2-201ENST00000355560 OLFM2O95897 454 aa26.04■■□□□ 1.76
CLK2-201ENST00000355560 ALDOAP04075 364 aaKnown RBP26.04■■□□□ 1.76
CLK2-201ENST00000355560 C8AP07357 584 aa26.04■■□□□ 1.76
CLK2-201ENST00000355560 HDCP19113 662 aa26.04■■□□□ 1.76
CLK2-201ENST00000355560 ZNF177Q13360 481 aaPredicted RBP26.04■■□□□ 1.76
CLK2-201ENST00000355560 PSRC1Q6PGN9 363 aaPredicted RBP26.04■■□□□ 1.76
CLK2-201ENST00000355560 SLC25A41Q8N5S1 370 aa26.04■■□□□ 1.76
CLK2-201ENST00000355560 ANKS4BQ8N8V4 417 aa26.04■■□□□ 1.76
CLK2-201ENST00000355560 ARRDC2Q8TBH0 407 aa26.04■■□□□ 1.76
CLK2-201ENST00000355560 TCAF1Q9Y4C2 921 aa26.04■■□□□ 1.76
CLK2-201ENST00000355560 RHOCP08134 193 aa26.03■■□□□ 1.76
CLK2-201ENST00000355560 DHRS4L1P0CG22 281 aa26.03■■□□□ 1.76
CLK2-201ENST00000355560 CYP4F8P98187 520 aa26.03■■□□□ 1.76
CLK2-201ENST00000355560 IFT88Q13099 833 aa26.03■■□□□ 1.76
CLK2-201ENST00000355560 IHHQ14623 411 aa26.03■■□□□ 1.76
CLK2-201ENST00000355560 GRTP1Q5TC63 336 aa26.03■■□□□ 1.76
CLK2-201ENST00000355560 LILRA6Q6PI73 481 aa26.03■■□□□ 1.76
CLK2-201ENST00000355560 C6orf89Q6UWU4 347 aa26.03■■□□□ 1.76
CLK2-201ENST00000355560 GAREM2Q75VX8 874 aa26.03■■□□□ 1.76
CLK2-201ENST00000355560 STRA8Q7Z7C7 330 aa26.03■■□□□ 1.76
CLK2-201ENST00000355560 ZNF599Q96NL3 588 aa26.03■■□□□ 1.76
CLK2-201ENST00000355560 RAD9AQ99638 391 aa26.03■■□□□ 1.76
CLK2-201ENST00000355560 SPON2Q9BUD6 331 aa26.03■■□□□ 1.76
CLK2-201ENST00000355560 PITPNM3Q9BZ71 974 aa26.03■■□□□ 1.76
CLK2-201ENST00000355560 VPS11Q9H270 941 aa26.03■■□□□ 1.76
CLK2-201ENST00000355560 ALG13Q9NP73 1137 aaKnown RBP26.03■■□□□ 1.76
CLK2-201ENST00000355560 STOML2Q9UJZ1 356 aa26.03■■□□□ 1.76
CLK2-201ENST00000355560 CPQQ9Y646 472 aa26.03■■□□□ 1.76
CLK2-201ENST00000355560 GOLGA8TH3BQL2 631 aa26.03■■□□□ 1.76
CLK2-201ENST00000355560 TPP1O14773 563 aa26.03■■□□□ 1.76
CLK2-201ENST00000355560 CCDC149Q6ZUS6 474 aa26.03■■□□□ 1.76
CLK2-201ENST00000355560 PTCD2Q8WV60 388 aaKnown RBP26.03■■□□□ 1.76
CLK2-201ENST00000355560 RBBP8Q99708 897 aa26.03■■□□□ 1.76
CLK2-201ENST00000355560 SEMA3CQ99985 751 aa26.03■■□□□ 1.76
CLK2-201ENST00000355560 ATP13A1Q9HD20 1204 aa26.03■■□□□ 1.76
CLK2-201ENST00000355560 IARS2Q9NSE4 1012 aaKnown RBP26.03■■□□□ 1.76
CLK2-201ENST00000355560 MUSKO15146 869 aa26.02■■□□□ 1.76
CLK2-201ENST00000355560 TLL1O43897 1013 aa26.02■■□□□ 1.76
CLK2-201ENST00000355560 F7P08709 466 aaPredicted RBP26.02■■□□□ 1.76
CLK2-201ENST00000355560 ZXDBP98169 803 aa26.02■■□□□ 1.76
CLK2-201ENST00000355560 PDE1BQ01064 536 aa26.02■■□□□ 1.76
CLK2-201ENST00000355560 PDPK2PQ6A1A2 396 aa26.02■■□□□ 1.76
CLK2-201ENST00000355560 SETD3Q86TU7 594 aaPredicted RBP26.02■■□□□ 1.76
CLK2-201ENST00000355560 ADAMTS19Q8TE59 1207 aa26.02■■□□□ 1.76
CLK2-201ENST00000355560 ARNT2Q9HBZ2 717 aa26.02■■□□□ 1.76
CLK2-201ENST00000355560 SLCO1B3Q9NPD5 702 aa26.02■■□□□ 1.76
CLK2-201ENST00000355560 PLLPQ9Y342 182 aa26.02■■□□□ 1.76
CLK2-201ENST00000355560 ACTL7AQ9Y615 435 aa26.02■■□□□ 1.76
CLK2-201ENST00000355560 ILVBLA1L0T0 632 aa26.02■■□□□ 1.76
CLK2-201ENST00000355560 GJB3O75712 270 aa26.02■■□□□ 1.76
CLK2-201ENST00000355560 CTNNB1P35222 781 aa26.02■■□□□ 1.76
CLK2-201ENST00000355560 OXCT1P55809 520 aa26.02■■□□□ 1.76
CLK2-201ENST00000355560 ERVFC1P60507 584 aa26.02■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms