RNA–Protein interactions for RNA: ENST00000355387.6

RNF220-202, Transcript of ring finger protein 220, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF220, Length 3,099 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-202ENST00000355387 PSMD5Q16401 504 aa13.14□□□□□ -0.31
RNF220-202ENST00000355387 KIAA0408Q6ZU52 694 aa13.14□□□□□ -0.31
RNF220-202ENST00000355387 TP53INP2Q8IXH6 220 aa13.14□□□□□ -0.31
RNF220-202ENST00000355387 LSMEM2Q8N112 164 aa13.14□□□□□ -0.31
RNF220-202ENST00000355387 CCDC126Q96EE4 140 aa13.14□□□□□ -0.31
RNF220-202ENST00000355387 GPR78Q96P69 363 aa13.14□□□□□ -0.31
RNF220-202ENST00000355387 CAB39LQ9H9S4 337 aa13.14□□□□□ -0.31
RNF220-202ENST00000355387 CSNK1G1Q9HCP0 422 aa13.14□□□□□ -0.31
RNF220-202ENST00000355387 MAN1C1Q9NR34 630 aa13.14□□□□□ -0.31
RNF220-202ENST00000355387 SARDHQ9UL12 918 aa13.14□□□□□ -0.31
RNF220-202ENST00000355387 SLC39A10Q9ULF5 831 aa13.14□□□□□ -0.31
RNF220-202ENST00000355387 IPPQ9Y573 584 aa13.14□□□□□ -0.31
RNF220-202ENST00000355387 C15orf38-AP3S2A0A0A6YYH1 394 aa13.14□□□□□ -0.31
RNF220-202ENST00000355387 I6L893 689 aaPredicted RBP13.14□□□□□ -0.31
RNF220-202ENST00000355387 SORBS2O94875 1100 aaKnown RBP13.14□□□□□ -0.31
RNF220-202ENST00000355387 NMBRP28336 390 aa13.14□□□□□ -0.31
RNF220-202ENST00000355387 HOXC13P31276 330 aa13.14□□□□□ -0.31
RNF220-202ENST00000355387 FLOT2Q14254 428 aa13.14□□□□□ -0.31
RNF220-202ENST00000355387 USP10Q14694 798 aaKnown RBP13.14□□□□□ -0.31
RNF220-202ENST00000355387 MAPRE2Q15555 327 aa13.14□□□□□ -0.31
RNF220-202ENST00000355387 LDLRAD1Q5T700 205 aa13.14□□□□□ -0.31
RNF220-202ENST00000355387 BHLHA9Q7RTU4 235 aa13.14□□□□□ -0.31
RNF220-202ENST00000355387 ARPINQ7Z6K5 226 aa13.14□□□□□ -0.31
RNF220-202ENST00000355387 GALNT7Q86SF2 657 aa13.14□□□□□ -0.31
RNF220-202ENST00000355387 FAM35AQ86V20 835 aa13.14□□□□□ -0.31
RNF220-202ENST00000355387 CENPLQ8N0S6 344 aaPredicted RBP13.14□□□□□ -0.31
RNF220-202ENST00000355387 LZTR1Q8N653 840 aa13.14□□□□□ -0.31
RNF220-202ENST00000355387 NAT14Q8WUY8 206 aa13.14□□□□□ -0.31
RNF220-202ENST00000355387 DUS3LQ96G46 650 aaKnown RBP13.14□□□□□ -0.31
RNF220-202ENST00000355387 MAML3Q96JK9 1138 aa13.14□□□□□ -0.31
RNF220-202ENST00000355387 LRGUKQ96M69 825 aa13.14□□□□□ -0.31
RNF220-202ENST00000355387 MED10Q9BTT4 135 aa13.14□□□□□ -0.31
RNF220-202ENST00000355387 FAM49AQ9H0Q0 323 aaPredicted RBP13.14□□□□□ -0.31
RNF220-202ENST00000355387 ANLNQ9NQW6 1124 aa13.14□□□□□ -0.31
RNF220-202ENST00000355387 YJEFN3A6XGL0 299 aa13.13□□□□□ -0.31
RNF220-202ENST00000355387 USP12O75317 370 aa13.13□□□□□ -0.31
RNF220-202ENST00000355387 CHRNGP07510 517 aa13.13□□□□□ -0.31
RNF220-202ENST00000355387 CHSY3Q70JA7 882 aa13.13□□□□□ -0.31
RNF220-202ENST00000355387 SMG8Q8ND04 991 aaKnown RBP13.13□□□□□ -0.31
RNF220-202ENST00000355387 IL12RB2Q99665 862 aa13.13□□□□□ -0.31
RNF220-202ENST00000355387 SMOQ99835 787 aa13.13□□□□□ -0.31
RNF220-202ENST00000355387 MRPL57Q9BQC6 102 aaKnown RBP13.13□□□□□ -0.31
RNF220-202ENST00000355387 PRKD2Q9BZL6 878 aa13.13□□□□□ -0.31
RNF220-202ENST00000355387 MRPL46Q9H2W6 279 aaKnown RBP13.13□□□□□ -0.31
RNF220-202ENST00000355387 CRTAC1Q9NQ79 661 aa13.13□□□□□ -0.31
RNF220-202ENST00000355387 FNIP2Q9P278 1114 aa13.13□□□□□ -0.31
RNF220-202ENST00000355387 CDH9Q9ULB4 789 aa13.13□□□□□ -0.31
RNF220-202ENST00000355387 HHLA1C9JL84 531 aa13.13□□□□□ -0.31
RNF220-202ENST00000355387 TK2O00142 265 aa13.13□□□□□ -0.31
RNF220-202ENST00000355387 HAS3O00219 553 aa13.13□□□□□ -0.31
RNF220-202ENST00000355387 CLDN5O00501 218 aa13.13□□□□□ -0.31
RNF220-202ENST00000355387 SMIM18P0DKX4 95 aa13.13□□□□□ -0.31
RNF220-202ENST00000355387 RGS2P41220 211 aa13.13□□□□□ -0.31
RNF220-202ENST00000355387 RPL5P46777 297 aaKnown RBP13.13□□□□□ -0.31
RNF220-202ENST00000355387 THOP1P52888 689 aa13.13□□□□□ -0.31
RNF220-202ENST00000355387 MAP3K7CLP57077 242 aa13.13□□□□□ -0.31
RNF220-202ENST00000355387 OLIG2Q13516 323 aa13.13□□□□□ -0.31
RNF220-202ENST00000355387 ADRM1Q16186 407 aa13.13□□□□□ -0.31
RNF220-202ENST00000355387 GRAMD1BQ3KR37 738 aa13.13□□□□□ -0.31
RNF220-202ENST00000355387 FBXL19Q6PCT2 694 aa13.13□□□□□ -0.31
RNF220-202ENST00000355387 DLK2Q6UY11 383 aa13.13□□□□□ -0.31
RNF220-202ENST00000355387 ARHGAP22Q7Z5H3 698 aa13.13□□□□□ -0.31
RNF220-202ENST00000355387 PELI3Q8N2H9 469 aa13.13□□□□□ -0.31
RNF220-202ENST00000355387 FSTL5Q8N475 847 aaPredicted RBP13.13□□□□□ -0.31
RNF220-202ENST00000355387 KDM1BQ8NB78 822 aa13.13□□□□□ -0.31
RNF220-202ENST00000355387 RIN3Q8TB24 985 aa13.13□□□□□ -0.31
RNF220-202ENST00000355387 TBL1YQ9BQ87 522 aa13.13□□□□□ -0.31
RNF220-202ENST00000355387 MRPS26Q9BYN8 205 aaKnown RBP13.13□□□□□ -0.31
RNF220-202ENST00000355387 SHCBP1LQ9BZQ2 653 aa13.13□□□□□ -0.31
RNF220-202ENST00000355387 WDR41Q9HAD4 459 aa13.13□□□□□ -0.31
RNF220-202ENST00000355387 DDIT4Q9NX09 232 aa13.13□□□□□ -0.31
RNF220-202ENST00000355387 SUCOQ9UBS9 1254 aaKnown RBP13.13□□□□□ -0.31
RNF220-202ENST00000355387 PTPRDP23468 1912 aa13.13□□□□□ -0.31
RNF220-202ENST00000355387 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.12□□□□□ -0.31
RNF220-202ENST00000355387 BTBD19C9JJ37 291 aa13.12□□□□□ -0.31
RNF220-202ENST00000355387 ACOT8O14734 319 aa13.12□□□□□ -0.31
RNF220-202ENST00000355387 AIM2O14862 343 aa13.12□□□□□ -0.31
RNF220-202ENST00000355387 DNAJA2O60884 412 aa13.12□□□□□ -0.31
RNF220-202ENST00000355387 PENKP01210 267 aaPredicted RBP13.12□□□□□ -0.31
RNF220-202ENST00000355387 YBX3P16989 372 aaKnown RBP eCLIP13.12□□□□□ -0.31
RNF220-202ENST00000355387 ITGA7Q13683 1181 aa13.12□□□□□ -0.31
RNF220-202ENST00000355387 KIAA0930Q6ICG6 404 aaPredicted RBP13.12□□□□□ -0.31
RNF220-202ENST00000355387 BORAQ6PGQ7 559 aa13.12□□□□□ -0.31
RNF220-202ENST00000355387 LRRC49Q8IUZ0 686 aa13.12□□□□□ -0.31
RNF220-202ENST00000355387 AFAP1L2Q8N4X5 818 aa13.12□□□□□ -0.31
RNF220-202ENST00000355387 PPHLN1Q8NEY8 458 aaKnown RBP13.12□□□□□ -0.31
RNF220-202ENST00000355387 ATXN7L3BQ96GX2 97 aa13.12□□□□□ -0.31
RNF220-202ENST00000355387 TINF2Q9BSI4 451 aa13.12□□□□□ -0.31
RNF220-202ENST00000355387 WDCPQ9H6R7 721 aa13.12□□□□□ -0.31
RNF220-202ENST00000355387 NCKIPSDQ9NZQ3 722 aa13.12□□□□□ -0.31
RNF220-202ENST00000355387 OR12D3Q9UGF7 316 aa13.12□□□□□ -0.31
RNF220-202ENST00000355387 ZDHHC2Q9UIJ5 367 aa13.12□□□□□ -0.31
RNF220-202ENST00000355387 RUVBL2Q9Y230 463 aaKnown RBP13.12□□□□□ -0.31
RNF220-202ENST00000355387 TANC1Q9C0D5 1861 aa13.12□□□□□ -0.31
RNF220-202ENST00000355387 SYNJ2BP-COX16A0A087WUM0 186 aa13.12□□□□□ -0.31
RNF220-202ENST00000355387 TRIM38O00635 465 aa13.12□□□□□ -0.31
RNF220-202ENST00000355387 FGF10O15520 208 aaPredicted RBP13.12□□□□□ -0.31
RNF220-202ENST00000355387 DLX3O60479 287 aa13.12□□□□□ -0.31
RNF220-202ENST00000355387 TNFAIP8O95379 198 aa13.12□□□□□ -0.31
RNF220-202ENST00000355387 IGLV3-25P01717 112 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms