RNA–Protein interactions for RNA: ENST00000355354.11

CD47-201, Transcript of CD47 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD47, Length 5,020 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-201ENST00000355354 MCMBPQ9BTE3 642 aa5.75□□□□□ -1.49
CD47-201ENST00000355354 TMEM121BQ9BXQ6 578 aaPredicted RBP5.75□□□□□ -1.49
CD47-201ENST00000355354 CWH43Q9H720 699 aa5.75□□□□□ -1.49
CD47-201ENST00000355354 WDR6Q9NNW5 1121 aaKnown RBP5.75□□□□□ -1.49
CD47-201ENST00000355354 NGRNQ9NPE2 291 aaKnown RBP5.75□□□□□ -1.49
CD47-201ENST00000355354 RAB6BQ9NRW1 208 aa5.75□□□□□ -1.49
CD47-201ENST00000355354 MPP6Q9NZW5 540 aa5.75□□□□□ -1.49
CD47-201ENST00000355354 HESX1Q9UBX0 185 aa5.75□□□□□ -1.49
CD47-201ENST00000355354 ZCWPW2A0A1B0GU75 182 aa5.75□□□□□ -1.49
CD47-201ENST00000355354 J3QRK9 145 aa5.75□□□□□ -1.49
CD47-201ENST00000355354 RGS16O15492 202 aaPredicted RBP5.75□□□□□ -1.49
CD47-201ENST00000355354 CNTN5O94779 1100 aa5.75□□□□□ -1.49
CD47-201ENST00000355354 TNFRSF8P28908 595 aa5.75□□□□□ -1.49
CD47-201ENST00000355354 PSMC2P35998 433 aaKnown RBP5.75□□□□□ -1.49
CD47-201ENST00000355354 PIK3CGP48736 1102 aa5.75□□□□□ -1.49
CD47-201ENST00000355354 IRF3Q14653 427 aa5.75□□□□□ -1.49
CD47-201ENST00000355354 FGD3Q5JSP0 725 aa5.75□□□□□ -1.49
CD47-201ENST00000355354 LDLRAP1Q5SW96 308 aa5.75□□□□□ -1.49
CD47-201ENST00000355354 CDCP2Q5VXM1 449 aa5.75□□□□□ -1.49
CD47-201ENST00000355354 OFCC1Q8IZS5 231 aa5.75□□□□□ -1.49
CD47-201ENST00000355354 LILRA3Q8N6C8 439 aaPredicted RBP5.75□□□□□ -1.49
CD47-201ENST00000355354 PPM1NQ8N819 430 aa5.75□□□□□ -1.49
CD47-201ENST00000355354 FBXL8Q96CD0 374 aa5.75□□□□□ -1.49
CD47-201ENST00000355354 AURKBQ96GD4 344 aaPredicted RBP5.75□□□□□ -1.49
CD47-201ENST00000355354 VCPIP1Q96JH7 1222 aa5.75□□□□□ -1.49
CD47-201ENST00000355354 THTPAQ9BU02 230 aa5.75□□□□□ -1.49
CD47-201ENST00000355354 VN1R3Q9BXE9 311 aa5.75□□□□□ -1.49
CD47-201ENST00000355354 ALG2Q9H553 416 aa5.75□□□□□ -1.49
CD47-201ENST00000355354 MARCH7Q9H992 704 aa5.75□□□□□ -1.49
CD47-201ENST00000355354 LHX6Q9UPM6 363 aa5.75□□□□□ -1.49
CD47-201ENST00000355354 USP15Q9Y4E8 981 aaPredicted RBP5.75□□□□□ -1.49
CD47-201ENST00000355354 LRRC42Q9Y546 428 aa5.75□□□□□ -1.49
CD47-201ENST00000355354 ASB3Q9Y575 518 aa5.75□□□□□ -1.49
CD47-201ENST00000355354 V9GYQ6 96 aa5.75□□□□□ -1.49
CD47-201ENST00000355354 COL5A1P20908 1838 aaPredicted RBP5.75□□□□□ -1.49
CD47-201ENST00000355354 TCAF2A6NFQ2 919 aa5.74□□□□□ -1.49
CD47-201ENST00000355354 PRR33A8MZF0 331 aa5.74□□□□□ -1.49
CD47-201ENST00000355354 TRIM49D1C9J1S8 452 aa5.74□□□□□ -1.49
CD47-201ENST00000355354 G3V2L1 256 aa5.74□□□□□ -1.49
CD47-201ENST00000355354 FCHO1O14526 889 aa5.74□□□□□ -1.49
CD47-201ENST00000355354 TRDMT1O14717 391 aaKnown RBP5.74□□□□□ -1.49
CD47-201ENST00000355354 GRID2O43424 1007 aa5.74□□□□□ -1.49
CD47-201ENST00000355354 PROSCO94903 275 aa5.74□□□□□ -1.49
CD47-201ENST00000355354 ADCY8P40145 1251 aa5.74□□□□□ -1.49
CD47-201ENST00000355354 PAK2Q13177 524 aa5.74□□□□□ -1.49
CD47-201ENST00000355354 THOC5Q13769 683 aaKnown RBP5.74□□□□□ -1.49
CD47-201ENST00000355354 SMAD2Q15796 467 aaKnown RBP5.74□□□□□ -1.49
CD47-201ENST00000355354 CELF3Q5SZQ8 465 aaKnown RBP5.74□□□□□ -1.49
CD47-201ENST00000355354 ZPBP2Q6X784 338 aa5.74□□□□□ -1.49
CD47-201ENST00000355354 PCDH20Q8N6Y1 951 aaKnown RBP5.74□□□□□ -1.49
CD47-201ENST00000355354 SNX19Q92543 992 aa5.74□□□□□ -1.49
CD47-201ENST00000355354 TMEM74Q96NL1 305 aa5.74□□□□□ -1.49
CD47-201ENST00000355354 KLHL5Q96PQ7 755 aa5.74□□□□□ -1.49
CD47-201ENST00000355354 POLR3FQ9H1D9 316 aaPredicted RBP5.74□□□□□ -1.49
CD47-201ENST00000355354 MTG2Q9H4K7 406 aa5.74□□□□□ -1.49
CD47-201ENST00000355354 PAK1IP1Q9NWT1 392 aaPredicted RBP5.74□□□□□ -1.49
CD47-201ENST00000355354 AMFRQ9UKV5 643 aa5.74□□□□□ -1.49
CD47-201ENST00000355354 ZNF148Q9UQR1 794 aa5.74□□□□□ -1.49
CD47-201ENST00000355354 PRAMEF25A6NGN4 478 aa5.74□□□□□ -1.49
CD47-201ENST00000355354 PPM1DO15297 605 aa5.74□□□□□ -1.49
CD47-201ENST00000355354 PLS3P13797 630 aa5.74□□□□□ -1.49
CD47-201ENST00000355354 MAGP20916 626 aa5.74□□□□□ -1.49
CD47-201ENST00000355354 PDE6CP51160 858 aa5.74□□□□□ -1.49
CD47-201ENST00000355354 DIO3P55073 304 aa5.74□□□□□ -1.49
CD47-201ENST00000355354 TFF2Q03403 129 aa5.74□□□□□ -1.49
CD47-201ENST00000355354 RCN2Q14257 317 aa5.74□□□□□ -1.49
CD47-201ENST00000355354 PRKD1Q15139 912 aaPredicted RBP5.74□□□□□ -1.49
CD47-201ENST00000355354 DRICH1Q6PGQ1 229 aaPredicted RBP5.74□□□□□ -1.49
CD47-201ENST00000355354 HOOK3Q86VS8 718 aa5.74□□□□□ -1.49
CD47-201ENST00000355354 GDPD5Q8WTR4 605 aa5.74□□□□□ -1.49
CD47-201ENST00000355354 WASF1Q92558 559 aa5.74□□□□□ -1.49
CD47-201ENST00000355354 CEP63Q96MT8 703 aa5.74□□□□□ -1.49
CD47-201ENST00000355354 NPAS2Q99743 824 aa5.74□□□□□ -1.49
CD47-201ENST00000355354 OLFM1Q99784 485 aa5.74□□□□□ -1.49
CD47-201ENST00000355354 ACTL8Q9H568 366 aa5.74□□□□□ -1.49
CD47-201ENST00000355354 DHX35Q9H5Z1 703 aaKnown RBP5.74□□□□□ -1.49
CD47-201ENST00000355354 MTO1Q9Y2Z2 717 aaKnown RBP5.74□□□□□ -1.49
CD47-201ENST00000355354 CAB39Q9Y376 341 aaPredicted RBP5.74□□□□□ -1.49
CD47-201ENST00000355354 KIF2AO00139 706 aaPredicted RBP5.74□□□□□ -1.49
CD47-201ENST00000355354 INPP4BO15327 924 aa5.74□□□□□ -1.49
CD47-201ENST00000355354 CCNB1P14635 433 aa5.74□□□□□ -1.49
CD47-201ENST00000355354 VARSP26640 1264 aaKnown RBP5.74□□□□□ -1.49
CD47-201ENST00000355354 NDST2P52849 883 aa5.74□□□□□ -1.49
CD47-201ENST00000355354 ALDH18A1P54886 795 aaKnown RBP5.74□□□□□ -1.49
CD47-201ENST00000355354 BIRC2Q13490 618 aa5.74□□□□□ -1.49
CD47-201ENST00000355354 ITGA9Q13797 1035 aa5.74□□□□□ -1.49
CD47-201ENST00000355354 BLMHQ13867 455 aa5.74□□□□□ -1.49
CD47-201ENST00000355354 CYP2R1Q6VVX0 501 aa5.74□□□□□ -1.49
CD47-201ENST00000355354 TMEM179BQ7Z7N9 219 aa5.74□□□□□ -1.49
CD47-201ENST00000355354 CCDC71Q8IV32 467 aaPredicted RBP5.74□□□□□ -1.49
CD47-201ENST00000355354 IFT20Q8IY31 132 aa5.74□□□□□ -1.49
CD47-201ENST00000355354 SYCP3Q8IZU3 236 aa5.74□□□□□ -1.49
CD47-201ENST00000355354 TP53I13Q8NBR0 393 aaPredicted RBP5.74□□□□□ -1.49
CD47-201ENST00000355354 NMD3Q96D46 503 aaKnown RBP5.74□□□□□ -1.49
CD47-201ENST00000355354 CDK5RAP3Q96JB5 506 aa5.74□□□□□ -1.49
CD47-201ENST00000355354 TRABDQ9H4I3 376 aa5.74□□□□□ -1.49
CD47-201ENST00000355354 PRDM12Q9H4Q4 367 aa5.74□□□□□ -1.49
CD47-201ENST00000355354 EGFL7Q9UHF1 273 aa5.74□□□□□ -1.49
CD47-201ENST00000355354 RPS6KL1Q9Y6S9 549 aa5.74□□□□□ -1.49
CD47-201ENST00000355354 IGKV6-21A0A0C4DH24 114 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms