RNA–Protein interactions for RNA: ENST00000354822.6

NKX2-1-201, Transcript of NK2 homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene NKX2-1, Length 2,191 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-201ENST00000354822 PRKAR2AP13861 404 aaKnown RBP22.57■■□□□ 1.2
NKX2-1-201ENST00000354822 CRABP2P29373 138 aa22.57■■□□□ 1.2
NKX2-1-201ENST00000354822 ARCN1P48444 511 aaKnown RBP22.57■■□□□ 1.2
NKX2-1-201ENST00000354822 SESN3P58005 492 aa22.57■■□□□ 1.2
NKX2-1-201ENST00000354822 RANBP10Q6VN20 620 aa22.57■■□□□ 1.2
NKX2-1-201ENST00000354822 RIPOR1Q6ZS17 1223 aa22.57■■□□□ 1.2
NKX2-1-201ENST00000354822 ARHGAP18Q8N392 663 aa22.57■■□□□ 1.2
NKX2-1-201ENST00000354822 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP22.57■■□□□ 1.2
NKX2-1-201ENST00000354822 PCSK9Q8NBP7 692 aaKnown RBP22.57■■□□□ 1.2
NKX2-1-201ENST00000354822 STON2Q8WXE9 905 aa22.57■■□□□ 1.2
NKX2-1-201ENST00000354822 NMRK1Q9NWW6 199 aa22.57■■□□□ 1.2
NKX2-1-201ENST00000354822 SCML2Q9UQR0 700 aa22.57■■□□□ 1.2
NKX2-1-201ENST00000354822 TLR6Q9Y2C9 796 aa22.57■■□□□ 1.2
NKX2-1-201ENST00000354822 HS3ST4Q9Y661 456 aa22.57■■□□□ 1.2
NKX2-1-201ENST00000354822 NLRC5Q86WI3 1866 aa22.57■■□□□ 1.2
NKX2-1-201ENST00000354822 OAZ2O95190 189 aa22.56■■□□□ 1.2
NKX2-1-201ENST00000354822 VAPBO95292 243 aa22.56■■□□□ 1.2
NKX2-1-201ENST00000354822 PAPOLAP51003 745 aaKnown RBP22.56■■□□□ 1.2
NKX2-1-201ENST00000354822 AP2B1P63010 937 aa22.56■■□□□ 1.2
NKX2-1-201ENST00000354822 ASPHQ12797 758 aa22.56■■□□□ 1.2
NKX2-1-201ENST00000354822 USP4Q13107 963 aa22.56■■□□□ 1.2
NKX2-1-201ENST00000354822 ARTNQ5T4W7 220 aa22.56■■□□□ 1.2
NKX2-1-201ENST00000354822 C1orf146Q5VVC0 180 aa22.56■■□□□ 1.2
NKX2-1-201ENST00000354822 GLB1LQ6UWU2 654 aa22.56■■□□□ 1.2
NKX2-1-201ENST00000354822 MYLK4Q86YV6 388 aaPredicted RBP22.56■■□□□ 1.2
NKX2-1-201ENST00000354822 SCN4BQ8IWT1 228 aa22.56■■□□□ 1.2
NKX2-1-201ENST00000354822 TMEM151AQ8N4L1 468 aa22.56■■□□□ 1.2
NKX2-1-201ENST00000354822 GABPB2Q8TAK5 448 aaPredicted RBP22.56■■□□□ 1.2
NKX2-1-201ENST00000354822 FATE1Q969F0 183 aa22.56■■□□□ 1.2
NKX2-1-201ENST00000354822 FUBP3Q96I24 572 aaKnown RBP eCLIP22.56■■□□□ 1.2
NKX2-1-201ENST00000354822 PANX3Q96QZ0 392 aa22.56■■□□□ 1.2
NKX2-1-201ENST00000354822 FBXO44Q9H4M3 255 aa22.56■■□□□ 1.2
NKX2-1-201ENST00000354822 CPSF2Q9P2I0 782 aaKnown RBP22.56■■□□□ 1.2
NKX2-1-201ENST00000354822 A0A088AWK7 358 aa22.56■■□□□ 1.2
NKX2-1-201ENST00000354822 A0A1W2PQH9 124 aa22.56■■□□□ 1.2
NKX2-1-201ENST00000354822 TMEM88BA6NKF7 163 aa22.56■■□□□ 1.2
NKX2-1-201ENST00000354822 SLCO1B7G3V0H7 640 aa22.56■■□□□ 1.2
NKX2-1-201ENST00000354822 FKBP6O75344 327 aa22.56■■□□□ 1.2
NKX2-1-201ENST00000354822 HLA-DQB2P05538 268 aa22.56■■□□□ 1.2
NKX2-1-201ENST00000354822 F7P08709 466 aaPredicted RBP22.56■■□□□ 1.2
NKX2-1-201ENST00000354822 GABRB3P28472 473 aa22.56■■□□□ 1.2
NKX2-1-201ENST00000354822 RAB10P61026 200 aa22.56■■□□□ 1.2
NKX2-1-201ENST00000354822 BLMHQ13867 455 aa22.56■■□□□ 1.2
NKX2-1-201ENST00000354822 NFE2Q16621 373 aaPredicted RBP22.56■■□□□ 1.2
NKX2-1-201ENST00000354822 SLC39A12Q504Y0 691 aa22.56■■□□□ 1.2
NKX2-1-201ENST00000354822 VWA5B1Q5TIE3 1220 aa22.56■■□□□ 1.2
NKX2-1-201ENST00000354822 ESRP1Q6NXG1 681 aaKnown RBP22.56■■□□□ 1.2
NKX2-1-201ENST00000354822 ZCWPW1Q9H0M4 648 aa22.56■■□□□ 1.2
NKX2-1-201ENST00000354822 NMUR1Q9HB89 426 aa22.56■■□□□ 1.2
NKX2-1-201ENST00000354822 IPO11Q9UI26 975 aaKnown RBP22.56■■□□□ 1.2
NKX2-1-201ENST00000354822 FNDC1Q4ZHG4 1894 aaPredicted RBP22.55■■□□□ 1.2
NKX2-1-201ENST00000354822 SLC35E2BP0CK96 405 aa22.55■■□□□ 1.2
NKX2-1-201ENST00000354822 STMN1P16949 149 aa22.55■■□□□ 1.2
NKX2-1-201ENST00000354822 KIAA0930Q6ICG6 404 aaPredicted RBP22.55■■□□□ 1.2
NKX2-1-201ENST00000354822 MSANTD2Q6P1R3 559 aa22.55■■□□□ 1.2
NKX2-1-201ENST00000354822 NUP93Q8N1F7 819 aa22.55■■□□□ 1.2
NKX2-1-201ENST00000354822 DTX3LQ8TDB6 740 aa22.55■■□□□ 1.2
NKX2-1-201ENST00000354822 STYXQ8WUJ0 223 aa22.55■■□□□ 1.2
NKX2-1-201ENST00000354822 CLPTM1LQ96KA5 538 aa22.55■■□□□ 1.2
NKX2-1-201ENST00000354822 SCYL1Q96KG9 808 aa22.55■■□□□ 1.2
NKX2-1-201ENST00000354822 FAM167BQ9BTA0 163 aa22.55■■□□□ 1.2
NKX2-1-201ENST00000354822 SLC25A51Q9H1U9 297 aa22.55■■□□□ 1.2
NKX2-1-201ENST00000354822 RGS18Q9NS28 235 aa22.55■■□□□ 1.2
NKX2-1-201ENST00000354822 NDFIP2Q9NV92 336 aa22.55■■□□□ 1.2
NKX2-1-201ENST00000354822 TMEM189-UBE2V1I3L0A0 370 aa22.55■■□□□ 1.2
NKX2-1-201ENST00000354822 SNUPNO95149 360 aaKnown RBP22.55■■□□□ 1.2
NKX2-1-201ENST00000354822 ELNP15502 786 aa22.55■■□□□ 1.2
NKX2-1-201ENST00000354822 SAT1P21673 171 aa22.55■■□□□ 1.2
NKX2-1-201ENST00000354822 PGFP49763 221 aa22.55■■□□□ 1.2
NKX2-1-201ENST00000354822 RPL14P50914 215 aaKnown RBP22.55■■□□□ 1.2
NKX2-1-201ENST00000354822 RENBPP51606 427 aa22.55■■□□□ 1.2
NKX2-1-201ENST00000354822 NDST2P52849 883 aa22.55■■□□□ 1.2
NKX2-1-201ENST00000354822 CAP1Q01518 475 aa22.55■■□□□ 1.2
NKX2-1-201ENST00000354822 PRKAA1Q13131 559 aa22.55■■□□□ 1.2
NKX2-1-201ENST00000354822 HNRNPDQ14103 355 aaKnown RBP22.55■■□□□ 1.2
NKX2-1-201ENST00000354822 TRIM71Q2Q1W2 868 aaKnown RBP22.55■■□□□ 1.2
NKX2-1-201ENST00000354822 TRIM68Q6AZZ1 485 aa22.55■■□□□ 1.2
NKX2-1-201ENST00000354822 SCG3Q8WXD2 468 aaKnown RBP22.55■■□□□ 1.2
NKX2-1-201ENST00000354822 ZNF419Q96HQ0 510 aaPredicted RBP22.55■■□□□ 1.2
NKX2-1-201ENST00000354822 MRGPRX2Q96LB1 330 aa22.55■■□□□ 1.2
NKX2-1-201ENST00000354822 C8orf48Q96LL4 319 aa22.55■■□□□ 1.2
NKX2-1-201ENST00000354822 ARNT2Q9HBZ2 717 aa22.55■■□□□ 1.2
NKX2-1-201ENST00000354822 TREX1Q9NSU2 369 aa22.55■■□□□ 1.2
NKX2-1-201ENST00000354822 VTI1BQ9UEU0 232 aa22.55■■□□□ 1.2
NKX2-1-201ENST00000354822 CCDC78A2IDD5 438 aa22.54■■□□□ 1.2
NKX2-1-201ENST00000354822 MATN2O00339 956 aa22.54■■□□□ 1.2
NKX2-1-201ENST00000354822 CCNT2O60583 730 aaKnown RBP22.54■■□□□ 1.2
NKX2-1-201ENST00000354822 PMPCBO75439 489 aa22.54■■□□□ 1.2
NKX2-1-201ENST00000354822 MOCS2O96007 188 aaPredicted RBP22.54■■□□□ 1.2
NKX2-1-201ENST00000354822 GRIA4P48058 902 aa22.54■■□□□ 1.2
NKX2-1-201ENST00000354822 NUMBP49757 651 aa22.54■■□□□ 1.2
NKX2-1-201ENST00000354822 SLC25A3Q00325 362 aa22.54■■□□□ 1.2
NKX2-1-201ENST00000354822 TMCO4Q5TGY1 634 aa22.54■■□□□ 1.2
NKX2-1-201ENST00000354822 AAGABQ6PD74 315 aa22.54■■□□□ 1.2
NKX2-1-201ENST00000354822 KIAA0408Q6ZU52 694 aa22.54■■□□□ 1.2
NKX2-1-201ENST00000354822 UMODL1-AS1Q8N2C9 162 aa22.54■■□□□ 1.2
NKX2-1-201ENST00000354822 C2CD4AQ8NCU7 369 aaPredicted RBP22.54■■□□□ 1.2
NKX2-1-201ENST00000354822 ACTRT2Q8TDY3 377 aa22.54■■□□□ 1.2
NKX2-1-201ENST00000354822 NRG4Q8WWG1 115 aa22.54■■□□□ 1.2
NKX2-1-201ENST00000354822 MIEF2Q96C03 454 aa22.54■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms