RNA–Protein interactions for RNA: ENST00000353317.9

TRIM55-204, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 2,624 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-204ENST00000353317 ARHGAP42A6NI28 874 aa8.75□□□□□ -1.01
TRIM55-204ENST00000353317 MDM4O15151 490 aa8.75□□□□□ -1.01
TRIM55-204ENST00000353317 MSI1O43347 362 aaKnown RBP8.75□□□□□ -1.01
TRIM55-204ENST00000353317 FKBP6O75344 327 aa8.75□□□□□ -1.01
TRIM55-204ENST00000353317 TBX18O95935 607 aa8.75□□□□□ -1.01
TRIM55-204ENST00000353317 ATP5BP06576 529 aaKnown RBP8.75□□□□□ -1.01
TRIM55-204ENST00000353317 CPB1P15086 417 aa8.75□□□□□ -1.01
TRIM55-204ENST00000353317 GOT1P17174 413 aa8.75□□□□□ -1.01
TRIM55-204ENST00000353317 SNX16P57768 344 aa8.75□□□□□ -1.01
TRIM55-204ENST00000353317 GBE1Q04446 702 aa8.75□□□□□ -1.01
TRIM55-204ENST00000353317 BTG3Q14201 252 aaPredicted RBP8.75□□□□□ -1.01
TRIM55-204ENST00000353317 MAPRE1Q15691 268 aaKnown RBP8.75□□□□□ -1.01
TRIM55-204ENST00000353317 ZNF280DQ6N043 979 aa8.75□□□□□ -1.01
TRIM55-204ENST00000353317 TIFABQ6ZNK6 161 aa8.75□□□□□ -1.01
TRIM55-204ENST00000353317 DENND5BQ6ZUT9 1274 aa8.75□□□□□ -1.01
TRIM55-204ENST00000353317 TAC4Q86UU9 113 aa8.75□□□□□ -1.01
TRIM55-204ENST00000353317 PPP1R14CQ8TAE6 165 aa8.75□□□□□ -1.01
TRIM55-204ENST00000353317 CASP10Q92851 521 aa8.75□□□□□ -1.01
TRIM55-204ENST00000353317 AZIN2Q96A70 460 aa8.75□□□□□ -1.01
TRIM55-204ENST00000353317 SHCBP1LQ9BZQ2 653 aa8.75□□□□□ -1.01
TRIM55-204ENST00000353317 IL23AQ9NPF7 189 aa8.75□□□□□ -1.01
TRIM55-204ENST00000353317 SORCS3Q9UPU3 1222 aa8.75□□□□□ -1.01
TRIM55-204ENST00000353317 PCDHA11Q9Y5I1 949 aa8.75□□□□□ -1.01
TRIM55-204ENST00000353317 SIN3BO75182 1162 aa8.75□□□□□ -1.01
TRIM55-204ENST00000353317 FBXO21O94952 628 aa8.75□□□□□ -1.01
TRIM55-204ENST00000353317 ARHGEF15O94989 841 aa8.75□□□□□ -1.01
TRIM55-204ENST00000353317 RTN3O95197 1032 aaPredicted RBP8.75□□□□□ -1.01
TRIM55-204ENST00000353317 GSTT1P30711 240 aa8.75□□□□□ -1.01
TRIM55-204ENST00000353317 ARRB2P32121 409 aa8.75□□□□□ -1.01
TRIM55-204ENST00000353317 SLC1A6P48664 564 aa8.75□□□□□ -1.01
TRIM55-204ENST00000353317 SERPINB9P50453 376 aa8.75□□□□□ -1.01
TRIM55-204ENST00000353317 CRADDP78560 199 aa8.75□□□□□ -1.01
TRIM55-204ENST00000353317 ASPHQ12797 758 aa8.75□□□□□ -1.01
TRIM55-204ENST00000353317 PDE1CQ14123 709 aaPredicted RBP8.75□□□□□ -1.01
TRIM55-204ENST00000353317 DPYSL2Q16555 572 aa8.75□□□□□ -1.01
TRIM55-204ENST00000353317 TMEM240Q5SV17 173 aa8.75□□□□□ -1.01
TRIM55-204ENST00000353317 N4BP2L1Q5TBK1 243 aaPredicted RBP8.75□□□□□ -1.01
TRIM55-204ENST00000353317 RASIP1Q5U651 963 aa8.75□□□□□ -1.01
TRIM55-204ENST00000353317 DHDDSQ86SQ9 333 aa8.75□□□□□ -1.01
TRIM55-204ENST00000353317 PDSS2Q86YH6 399 aa8.75□□□□□ -1.01
TRIM55-204ENST00000353317 DCP1BQ8IZD4 617 aaKnown RBP8.75□□□□□ -1.01
TRIM55-204ENST00000353317 TMEM199Q8N511 208 aa8.75□□□□□ -1.01
TRIM55-204ENST00000353317 COLGALT1Q8NBJ5 622 aa8.75□□□□□ -1.01
TRIM55-204ENST00000353317 DQX1Q8TE96 717 aaKnown RBP8.75□□□□□ -1.01
TRIM55-204ENST00000353317 GIPC2Q8TF65 315 aa8.75□□□□□ -1.01
TRIM55-204ENST00000353317 PPP2R3CQ969Q6 453 aa8.75□□□□□ -1.01
TRIM55-204ENST00000353317 CPSF2Q9P2I0 782 aaKnown RBP8.75□□□□□ -1.01
TRIM55-204ENST00000353317 ADAMTS6Q9UKP5 1117 aa8.75□□□□□ -1.01
TRIM55-204ENST00000353317 PCDHB5Q9Y5E4 795 aa8.75□□□□□ -1.01
TRIM55-204ENST00000353317 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP8.74□□□□□ -1.01
TRIM55-204ENST00000353317 F5H423 210 aaPredicted RBP8.74□□□□□ -1.01
TRIM55-204ENST00000353317 TPP1O14773 563 aa8.74□□□□□ -1.01
TRIM55-204ENST00000353317 CCNT2O60583 730 aaKnown RBP8.74□□□□□ -1.01
TRIM55-204ENST00000353317 GCATO75600 419 aa8.74□□□□□ -1.01
TRIM55-204ENST00000353317 PDE5AO76074 875 aa8.74□□□□□ -1.01
TRIM55-204ENST00000353317 IGLV3-25P01717 112 aa8.74□□□□□ -1.01
TRIM55-204ENST00000353317 PROCP04070 461 aa8.74□□□□□ -1.01
TRIM55-204ENST00000353317 DNAJB2P25686 324 aa8.74□□□□□ -1.01
TRIM55-204ENST00000353317 EPHB1P54762 984 aa8.74□□□□□ -1.01
TRIM55-204ENST00000353317 DEUP1Q05D60 604 aa8.74□□□□□ -1.01
TRIM55-204ENST00000353317 CCNIQ14094 377 aa8.74□□□□□ -1.01
TRIM55-204ENST00000353317 HNRNPDQ14103 355 aaKnown RBP8.74□□□□□ -1.01
TRIM55-204ENST00000353317 PCLAFQ15004 111 aa8.74□□□□□ -1.01
TRIM55-204ENST00000353317 SFT2D3Q587I9 215 aa8.74□□□□□ -1.01
TRIM55-204ENST00000353317 CFAP157Q5JU67 520 aa8.74□□□□□ -1.01
TRIM55-204ENST00000353317 SPOUT1Q5T280 376 aaKnown RBP8.74□□□□□ -1.01
TRIM55-204ENST00000353317 VWA5B1Q5TIE3 1220 aa8.74□□□□□ -1.01
TRIM55-204ENST00000353317 LPCAT4Q643R3 524 aa8.74□□□□□ -1.01
TRIM55-204ENST00000353317 SLC8B1Q6J4K2 584 aa8.74□□□□□ -1.01
TRIM55-204ENST00000353317 AAGABQ6PD74 315 aa8.74□□□□□ -1.01
TRIM55-204ENST00000353317 ADGRG6Q86SQ4 1221 aa8.74□□□□□ -1.01
TRIM55-204ENST00000353317 RASSF3Q86WH2 238 aa8.74□□□□□ -1.01
TRIM55-204ENST00000353317 OR6Y1Q8NGX8 325 aa8.74□□□□□ -1.01
TRIM55-204ENST00000353317 SLC26A7Q8TE54 656 aa8.74□□□□□ -1.01
TRIM55-204ENST00000353317 CCDC124Q96CT7 223 aaKnown RBP8.74□□□□□ -1.01
TRIM55-204ENST00000353317 CSPG4P5Q96PW8 444 aa8.74□□□□□ -1.01
TRIM55-204ENST00000353317 SORT1Q99523 831 aa8.74□□□□□ -1.01
TRIM55-204ENST00000353317 SEPT5Q99719 369 aaPredicted RBP8.74□□□□□ -1.01
TRIM55-204ENST00000353317 SIKE1Q9BRV8 207 aa8.74□□□□□ -1.01
TRIM55-204ENST00000353317 ZNF670Q9BS34 389 aa8.74□□□□□ -1.01
TRIM55-204ENST00000353317 DNAI2Q9GZS0 605 aa8.74□□□□□ -1.01
TRIM55-204ENST00000353317 PNPOQ9NVS9 261 aa8.74□□□□□ -1.01
TRIM55-204ENST00000353317 PIH1D1Q9NWS0 290 aaKnown RBP8.74□□□□□ -1.01
TRIM55-204ENST00000353317 DDIT4Q9NX09 232 aa8.74□□□□□ -1.01
TRIM55-204ENST00000353317 ETAA1Q9NY74 926 aa8.74□□□□□ -1.01
TRIM55-204ENST00000353317 IL37Q9NZH6 218 aa8.74□□□□□ -1.01
TRIM55-204ENST00000353317 MTRRQ9UBK8 725 aa8.74□□□□□ -1.01
TRIM55-204ENST00000353317 APOBEC2Q9Y235 224 aaKnown RBP8.74□□□□□ -1.01
TRIM55-204ENST00000353317 DOCK4Q8N1I0 1966 aa8.74□□□□□ -1.01
TRIM55-204ENST00000353317 GBF1Q92538 1859 aa8.74□□□□□ -1.01
TRIM55-204ENST00000353317 A0A1B0GVG6 124 aa8.74□□□□□ -1.01
TRIM55-204ENST00000353317 OR6C75A6NL08 312 aa8.74□□□□□ -1.01
TRIM55-204ENST00000353317 ZBBXA8MT70 800 aa8.74□□□□□ -1.01
TRIM55-204ENST00000353317 PLIN3O60664 434 aa8.74□□□□□ -1.01
TRIM55-204ENST00000353317 PRKCGP05129 697 aa8.74□□□□□ -1.01
TRIM55-204ENST00000353317 TPSB2P20231 275 aa8.74□□□□□ -1.01
TRIM55-204ENST00000353317 ADRA1BP35368 520 aa8.74□□□□□ -1.01
TRIM55-204ENST00000353317 GMPRP36959 345 aa8.74□□□□□ -1.01
TRIM55-204ENST00000353317 COPAP53621 1224 aa8.74□□□□□ -1.01
TRIM55-204ENST00000353317 PEX6Q13608 980 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms