RNA–Protein interactions for RNA: ENST00000352818.8

CD44-205, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-205ENST00000352818 RGS16O15492 202 aaPredicted RBP8.43□□□□□ -1.06
CD44-205ENST00000352818 PECAM1P16284 738 aaPredicted RBP8.43□□□□□ -1.06
CD44-205ENST00000352818 TYMPP19971 482 aa8.43□□□□□ -1.06
CD44-205ENST00000352818 IL4RP24394 825 aa8.43□□□□□ -1.06
CD44-205ENST00000352818 NOS2P35228 1153 aa8.43□□□□□ -1.06
CD44-205ENST00000352818 MATKP42679 507 aa8.43□□□□□ -1.06
CD44-205ENST00000352818 MMP13P45452 471 aa8.43□□□□□ -1.06
CD44-205ENST00000352818 CLCNKBP51801 687 aa8.43□□□□□ -1.06
CD44-205ENST00000352818 AIF1P55008 147 aa8.43□□□□□ -1.06
CD44-205ENST00000352818 EIF3EP60228 445 aaKnown RBP8.43□□□□□ -1.06
CD44-205ENST00000352818 GPS1Q13098 491 aa8.43□□□□□ -1.06
CD44-205ENST00000352818 XRCC4Q13426 336 aa8.43□□□□□ -1.06
CD44-205ENST00000352818 TUSC3Q13454 348 aa8.43□□□□□ -1.06
CD44-205ENST00000352818 AUHQ13825 339 aaKnown RBP8.43□□□□□ -1.06
CD44-205ENST00000352818 STAT4Q14765 748 aa8.43□□□□□ -1.06
CD44-205ENST00000352818 RASA2Q15283 850 aa8.43□□□□□ -1.06
CD44-205ENST00000352818 TAF5Q15542 800 aa8.43□□□□□ -1.06
CD44-205ENST00000352818 ZSCAN26Q16670 478 aa8.43□□□□□ -1.06
CD44-205ENST00000352818 SLC25A52Q3SY17 297 aa8.43□□□□□ -1.06
CD44-205ENST00000352818 ANKRD20A8PQ5CZ79 823 aa8.43□□□□□ -1.06
CD44-205ENST00000352818 SLC8B1Q6J4K2 584 aa8.43□□□□□ -1.06
CD44-205ENST00000352818 TMEM92Q6UXU6 159 aa8.43□□□□□ -1.06
CD44-205ENST00000352818 LRRC31Q6UY01 552 aa8.43□□□□□ -1.06
CD44-205ENST00000352818 CLEC20AQ6ZU45 233 aa8.43□□□□□ -1.06
CD44-205ENST00000352818 FAM35AQ86V20 835 aa8.43□□□□□ -1.06
CD44-205ENST00000352818 PIGZQ86VD9 579 aa8.43□□□□□ -1.06
CD44-205ENST00000352818 CCDC25Q86WR0 208 aa8.43□□□□□ -1.06
CD44-205ENST00000352818 TDRPQ86YL5 185 aa8.43□□□□□ -1.06
CD44-205ENST00000352818 GALNT15Q8N3T1 639 aa8.43□□□□□ -1.06
CD44-205ENST00000352818 PQLC3Q8N755 202 aa8.43□□□□□ -1.06
CD44-205ENST00000352818 PLD5Q8N7P1 536 aa8.43□□□□□ -1.06
CD44-205ENST00000352818 GLIS1Q8NBF1 620 aa8.43□□□□□ -1.06
CD44-205ENST00000352818 C3orf58Q8NDZ4 430 aa8.43□□□□□ -1.06
CD44-205ENST00000352818 CEP76Q8TAP6 659 aa8.43□□□□□ -1.06
CD44-205ENST00000352818 MYCBPAPQ8TBZ2 947 aa8.43□□□□□ -1.06
CD44-205ENST00000352818 ZBTB9Q96C00 473 aa8.43□□□□□ -1.06
CD44-205ENST00000352818 FAM118BQ9BPY3 351 aa8.43□□□□□ -1.06
CD44-205ENST00000352818 LPIN3Q9BQK8 851 aa8.43□□□□□ -1.06
CD44-205ENST00000352818 TMEM121Q9BTD3 319 aa8.43□□□□□ -1.06
CD44-205ENST00000352818 MAK16Q9BXY0 300 aaKnown RBP8.43□□□□□ -1.06
CD44-205ENST00000352818 B3GNT5Q9BYG0 378 aa8.43□□□□□ -1.06
CD44-205ENST00000352818 FRMD8Q9BZ67 464 aaPredicted RBP8.43□□□□□ -1.06
CD44-205ENST00000352818 IL21RQ9HBE5 538 aa8.43□□□□□ -1.06
CD44-205ENST00000352818 CYP4F11Q9HBI6 524 aa8.43□□□□□ -1.06
CD44-205ENST00000352818 CPNE5Q9HCH3 593 aa8.43□□□□□ -1.06
CD44-205ENST00000352818 CSNK1G1Q9HCP0 422 aa8.43□□□□□ -1.06
CD44-205ENST00000352818 CNGB3Q9NQW8 809 aa8.43□□□□□ -1.06
CD44-205ENST00000352818 RRN3Q9NYV6 651 aa8.43□□□□□ -1.06
CD44-205ENST00000352818 CWC15Q9P013 229 aaKnown RBP8.43□□□□□ -1.06
CD44-205ENST00000352818 FETUBQ9UGM5 382 aa8.43□□□□□ -1.06
CD44-205ENST00000352818 NOVA2Q9UNW9 492 aaKnown RBP8.43□□□□□ -1.06
CD44-205ENST00000352818 ACTL7BQ9Y614 415 aa8.43□□□□□ -1.06
CD44-205ENST00000352818 NBASA2RRP1 2371 aa8.42□□□□□ -1.06
CD44-205ENST00000352818 A0A087WUV0 522 aaPredicted RBP8.42□□□□□ -1.06
CD44-205ENST00000352818 HACD1B0YJ81 288 aa8.42□□□□□ -1.06
CD44-205ENST00000352818 TMEM189-UBE2V1I3L0A0 370 aa8.42□□□□□ -1.06
CD44-205ENST00000352818 I3L4J1 428 aa8.42□□□□□ -1.06
CD44-205ENST00000352818 PIK3R2O00459 728 aa8.42□□□□□ -1.06
CD44-205ENST00000352818 PRRG1O14668 218 aa8.42□□□□□ -1.06
CD44-205ENST00000352818 ALOX15BO15296 676 aa8.42□□□□□ -1.06
CD44-205ENST00000352818 RRP8O43159 456 aaKnown RBP8.42□□□□□ -1.06
CD44-205ENST00000352818 GRAP2O75791 330 aa8.42□□□□□ -1.06
CD44-205ENST00000352818 VNN2O95498 520 aa8.42□□□□□ -1.06
CD44-205ENST00000352818 RBP3P10745 1247 aa8.42□□□□□ -1.06
CD44-205ENST00000352818 MYF5P13349 255 aa8.42□□□□□ -1.06
CD44-205ENST00000352818 LCP1P13796 627 aa8.42□□□□□ -1.06
CD44-205ENST00000352818 ARSAP15289 507 aa8.42□□□□□ -1.06
CD44-205ENST00000352818 DRD1P21728 446 aa8.42□□□□□ -1.06
CD44-205ENST00000352818 L1CAMP32004 1257 aa8.42□□□□□ -1.06
CD44-205ENST00000352818 LSP1P33241 339 aa8.42□□□□□ -1.06
CD44-205ENST00000352818 MAGEA4P43358 317 aa8.42□□□□□ -1.06
CD44-205ENST00000352818 MAGEA6P43360 314 aa8.42□□□□□ -1.06
CD44-205ENST00000352818 NR2C2P49116 596 aa8.42□□□□□ -1.06
CD44-205ENST00000352818 VPS41P49754 854 aa8.42□□□□□ -1.06
CD44-205ENST00000352818 ZNF135P52742 658 aaPredicted RBP8.42□□□□□ -1.06
CD44-205ENST00000352818 ARL4CP56559 192 aa8.42□□□□□ -1.06
CD44-205ENST00000352818 MAGOHP61326 146 aaKnown RBP8.42□□□□□ -1.06
CD44-205ENST00000352818 DYNLT1P63172 113 aa8.42□□□□□ -1.06
CD44-205ENST00000352818 ATP11AP98196 1134 aa8.42□□□□□ -1.06
CD44-205ENST00000352818 NFKB2Q00653 900 aa8.42□□□□□ -1.06
CD44-205ENST00000352818 ADIGQ0VDE8 80 aa8.42□□□□□ -1.06
CD44-205ENST00000352818 TWF1Q12792 350 aa8.42□□□□□ -1.06
CD44-205ENST00000352818 PTPRNQ16849 979 aa8.42□□□□□ -1.06
CD44-205ENST00000352818 CDO1Q16878 200 aa8.42□□□□□ -1.06
CD44-205ENST00000352818 KCTD19Q17RG1 926 aaPredicted RBP8.42□□□□□ -1.06
CD44-205ENST00000352818 RAB6CQ53S08 254 aa8.42□□□□□ -1.06
CD44-205ENST00000352818 MDH1BQ5I0G3 518 aa8.42□□□□□ -1.06
CD44-205ENST00000352818 UBAP2Q5T6F2 1119 aaKnown RBP8.42□□□□□ -1.06
CD44-205ENST00000352818 OTUD1Q5VV17 481 aaPredicted RBP8.42□□□□□ -1.06
CD44-205ENST00000352818 DSTYKQ6XUX3 929 aa8.42□□□□□ -1.06
CD44-205ENST00000352818 DBX2Q6ZNG2 339 aa8.42□□□□□ -1.06
CD44-205ENST00000352818 CENPUQ71F23 418 aa8.42□□□□□ -1.06
CD44-205ENST00000352818 GAREM2Q75VX8 874 aa8.42□□□□□ -1.06
CD44-205ENST00000352818 BEND5Q7L4P6 421 aa8.42□□□□□ -1.06
CD44-205ENST00000352818 TAOK1Q7L7X3 1001 aa8.42□□□□□ -1.06
CD44-205ENST00000352818 SLC41A1Q8IVJ1 513 aa8.42□□□□□ -1.06
CD44-205ENST00000352818 CDKL3Q8IVW4 592 aaPredicted RBP8.42□□□□□ -1.06
CD44-205ENST00000352818 SIX6OS1Q8N1H7 587 aa8.42□□□□□ -1.06
CD44-205ENST00000352818 NAT8LQ8N9F0 302 aa8.42□□□□□ -1.06
CD44-205ENST00000352818 TRAF3IP1Q8TDR0 691 aaPredicted RBP8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms